BLASTX nr result

ID: Cimicifuga21_contig00025321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025321
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...   168   4e-40
ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [S...   156   1e-36
gb|AFW84961.1| putative MATE efflux family protein [Zea mays]         156   2e-36
ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea ma...   156   2e-36
dbj|BAK06394.1| predicted protein [Hordeum vulgare subsp. vulgare]    150   8e-35

>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score =  168 bits (426), Expect = 4e-40
 Identities = 76/102 (74%), Positives = 92/102 (90%)
 Frame = +3

Query: 3   MGSALETLCGQAVGAGQMNMLGIYMQRSWIITEVTALILTPLYVFASPLLKFIRQSNNIS 182
           MGSALETLCGQAVGAGQ+NMLG+YMQ+SWIIT V AL L P Y+FASPLL+ + Q  +IS
Sbjct: 94  MGSALETLCGQAVGAGQLNMLGVYMQKSWIITGVAALFLAPFYIFASPLLQLLHQDKDIS 153

Query: 183 ELAGKYAIWVIPQLFAYALNFPIQKFFQSQSKVWVMTVISIV 308
           ELAGKY+IWV+PQLFA+A+NFPIQKF Q+QS+VWVMT+IS++
Sbjct: 154 ELAGKYSIWVLPQLFAFAINFPIQKFLQAQSRVWVMTIISVI 195


>ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [Sorghum bicolor]
           gi|241930528|gb|EES03673.1| hypothetical protein
           SORBIDRAFT_03g035610 [Sorghum bicolor]
          Length = 487

 Score =  156 bits (395), Expect = 1e-36
 Identities = 71/100 (71%), Positives = 88/100 (88%)
 Frame = +3

Query: 3   MGSALETLCGQAVGAGQMNMLGIYMQRSWIITEVTALILTPLYVFASPLLKFIRQSNNIS 182
           MGSALETLCGQAVGAGQ+ MLG+YMQRSWII   T+L+L PLYVF SP+L+ +RQS +IS
Sbjct: 79  MGSALETLCGQAVGAGQLQMLGVYMQRSWIICVATSLVLLPLYVFTSPILRLLRQSADIS 138

Query: 183 ELAGKYAIWVIPQLFAYALNFPIQKFFQSQSKVWVMTVIS 302
            ++G+YA W +PQLFAYA+NFP+QKF+Q+QS+VWVMT IS
Sbjct: 139 AVSGRYARWCVPQLFAYAVNFPMQKFYQAQSRVWVMTAIS 178


>gb|AFW84961.1| putative MATE efflux family protein [Zea mays]
          Length = 554

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/100 (73%), Positives = 86/100 (86%)
 Frame = +3

Query: 3   MGSALETLCGQAVGAGQMNMLGIYMQRSWIITEVTALILTPLYVFASPLLKFIRQSNNIS 182
           MGSALETLCGQAVGAGQ+ MLG+YMQRSWII   T+L L PLYVF SPLL+ +RQS +IS
Sbjct: 141 MGSALETLCGQAVGAGQLQMLGVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSADIS 200

Query: 183 ELAGKYAIWVIPQLFAYALNFPIQKFFQSQSKVWVMTVIS 302
            +AG+YA W +PQLFAYA+NFPIQKF+Q+QS+VW MT IS
Sbjct: 201 AVAGRYARWCVPQLFAYAVNFPIQKFYQAQSRVWAMTAIS 240


>ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea mays]
           gi|219888227|gb|ACL54488.1| unknown [Zea mays]
          Length = 490

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/100 (73%), Positives = 86/100 (86%)
 Frame = +3

Query: 3   MGSALETLCGQAVGAGQMNMLGIYMQRSWIITEVTALILTPLYVFASPLLKFIRQSNNIS 182
           MGSALETLCGQAVGAGQ+ MLG+YMQRSWII   T+L L PLYVF SPLL+ +RQS +IS
Sbjct: 77  MGSALETLCGQAVGAGQLQMLGVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSADIS 136

Query: 183 ELAGKYAIWVIPQLFAYALNFPIQKFFQSQSKVWVMTVIS 302
            +AG+YA W +PQLFAYA+NFPIQKF+Q+QS+VW MT IS
Sbjct: 137 AVAGRYARWCVPQLFAYAVNFPIQKFYQAQSRVWAMTAIS 176


>dbj|BAK06394.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 481

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/100 (70%), Positives = 85/100 (85%)
 Frame = +3

Query: 3   MGSALETLCGQAVGAGQMNMLGIYMQRSWIITEVTALILTPLYVFASPLLKFIRQSNNIS 182
           MGSALETLCGQAVGAGQ++ LGIYMQRSWII   TA  L P+Y+F  P+L+ +RQS  IS
Sbjct: 76  MGSALETLCGQAVGAGQLHTLGIYMQRSWIICLATAAALLPVYMFTDPILRLLRQSPEIS 135

Query: 183 ELAGKYAIWVIPQLFAYALNFPIQKFFQSQSKVWVMTVIS 302
            +AG+YA W +PQLFAYA+NFP+QKF+Q+QS+VWVMTVIS
Sbjct: 136 AVAGRYARWCVPQLFAYAVNFPMQKFYQAQSRVWVMTVIS 175


Top