BLASTX nr result

ID: Cimicifuga21_contig00025313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025313
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523351.1| eukaryotic translation initiation factor 3 s...   330   1e-88
ref|XP_003638677.1| hypothetical protein MTR_139s0028 [Medicago ...   322   6e-86
ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis v...   317   2e-84
emb|CBI40528.3| unnamed protein product [Vitis vinifera]              317   2e-84
ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]    313   2e-83

>ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223537439|gb|EEF39067.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1872

 Score =  330 bits (847), Expect = 1e-88
 Identities = 165/227 (72%), Positives = 190/227 (83%)
 Frame = +2

Query: 44   EVEIAKSASLESQCETKDGDNXXXXXXXXXDAAFTRLKESETGLHCKSLQELIEMSQKYY 223
            E+E A SAS+ESQ ET   +N         D+AFTRL+ES+TGLHCKSLQEL++MSQKYY
Sbjct: 646  EIENANSASMESQLETTAKENELTLQMMLSDSAFTRLRESDTGLHCKSLQELLDMSQKYY 705

Query: 224  NEVALQKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGRVVKLSEKLSHVQSLCIHEM 403
             +VAL KLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLG VVKLSEKLSHVQSLCIHEM
Sbjct: 706  IDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLCIHEM 765

Query: 404  IIRAFKHILQAVISAVTKTEDISISIAATLNVMLGHSEDAESKSTCNVNALVWKWLQAFL 583
            I+RA+KHILQAVI+AV   E ++ISIAA LN+MLG  E  +S  + +VN+LVWKWL+ FL
Sbjct: 766  IVRAYKHILQAVIAAVVNHEKMAISIAAALNLMLGVPERGDSDKSYHVNSLVWKWLEVFL 825

Query: 584  MKRYDWELTSLNYLDVRKFAILRGLCHKMGIELAPRDFDMDSPTPFR 724
             KRY+W+L+  N+ DVRKFAILRGLCHK+GIEL PRDFDMDSP PFR
Sbjct: 826  KKRYEWDLSRSNFKDVRKFAILRGLCHKVGIELVPRDFDMDSPHPFR 872


>ref|XP_003638677.1| hypothetical protein MTR_139s0028 [Medicago truncatula]
           gi|355504612|gb|AES85815.1| hypothetical protein
           MTR_139s0028 [Medicago truncatula]
          Length = 1350

 Score =  322 bits (824), Expect = 6e-86
 Identities = 162/231 (70%), Positives = 189/231 (81%)
 Frame = +2

Query: 32  KSSAEVEIAKSASLESQCETKDGDNXXXXXXXXXDAAFTRLKESETGLHCKSLQELIEMS 211
           KS+ E E    +S ESQ ET   DN         +AAFTRLKES TGLHCKS+Q+LI++S
Sbjct: 91  KSNLEGENDALSSSESQHETAAVDNELVLKRMLSEAAFTRLKESGTGLHCKSMQDLIDLS 150

Query: 212 QKYYNEVALQKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGRVVKLSEKLSHVQSLC 391
           QKYY +VA+ KLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLG VVKLSEKLSHVQSLC
Sbjct: 151 QKYYMDVAIPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLSHVQSLC 210

Query: 392 IHEMIIRAFKHILQAVISAVTKTEDISISIAATLNVMLGHSEDAESKSTCNVNALVWKWL 571
           IHEMI+RAFKHIL+AVIS+V   E+++ SIA  LN++LG  E+ ES  +C+V+ LVWKWL
Sbjct: 211 IHEMIVRAFKHILRAVISSVVDKENMASSIAGALNLLLGVPENKESDKSCDVHPLVWKWL 270

Query: 572 QAFLMKRYDWELTSLNYLDVRKFAILRGLCHKMGIELAPRDFDMDSPTPFR 724
           + FL KR+DW+L+ LNY DVRKFAILRGLCHK+GIEL PRDFDMDSP PF+
Sbjct: 271 ELFLKKRFDWDLSRLNYKDVRKFAILRGLCHKVGIELVPRDFDMDSPFPFQ 321


>ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1863

 Score =  317 bits (812), Expect = 2e-84
 Identities = 161/247 (65%), Positives = 193/247 (78%), Gaps = 6/247 (2%)
 Frame = +2

Query: 2    GSNPKLPGD-GKSSAEVEIAKS-----ASLESQCETKDGDNXXXXXXXXXDAAFTRLKES 163
            G+N K+  +  K+ AE  I ++     +S + Q E    +N         DAAF RLK+S
Sbjct: 617  GNNLKMQSEKSKTPAESVIGEAENSTLSSTKPQLEANANENELALKRMLSDAAFARLKQS 676

Query: 164  ETGLHCKSLQELIEMSQKYYNEVALQKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLG 343
            ETGLH KSLQEL+++SQKYY+EVAL KLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLG
Sbjct: 677  ETGLHRKSLQELVDLSQKYYSEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLG 736

Query: 344  RVVKLSEKLSHVQSLCIHEMIIRAFKHILQAVISAVTKTEDISISIAATLNVMLGHSEDA 523
             VVKLSEKLSHVQSLCIHEMI+RAFKHILQAVI+AV   E +++SIAA LN+MLG   + 
Sbjct: 737  HVVKLSEKLSHVQSLCIHEMIVRAFKHILQAVIAAVVNPEKLAMSIAAALNLMLGVPGNR 796

Query: 524  ESKSTCNVNALVWKWLQAFLMKRYDWELTSLNYLDVRKFAILRGLCHKMGIELAPRDFDM 703
            E   +CN + LVW+WL+ FL KRY+W+ ++LNY DVRKFA+LRGLCHK+GIEL PRDFDM
Sbjct: 797  ELNQSCNAHPLVWRWLEVFLKKRYEWDFSTLNYKDVRKFAVLRGLCHKVGIELVPRDFDM 856

Query: 704  DSPTPFR 724
            DSP PF+
Sbjct: 857  DSPYPFQ 863


>emb|CBI40528.3| unnamed protein product [Vitis vinifera]
          Length = 1446

 Score =  317 bits (812), Expect = 2e-84
 Identities = 158/237 (66%), Positives = 186/237 (78%)
 Frame = +2

Query: 14   KLPGDGKSSAEVEIAKSASLESQCETKDGDNXXXXXXXXXDAAFTRLKESETGLHCKSLQ 193
            K+ G      E E +  +S + Q E    +N         DAAF RLK+SETGLH KSLQ
Sbjct: 597  KVEGLESVIGEAENSTLSSTKPQLEANANENELALKRMLSDAAFARLKQSETGLHRKSLQ 656

Query: 194  ELIEMSQKYYNEVALQKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGRVVKLSEKLS 373
            EL+++SQKYY+EVAL KLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLG VVKLSEKLS
Sbjct: 657  ELVDLSQKYYSEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGHVVKLSEKLS 716

Query: 374  HVQSLCIHEMIIRAFKHILQAVISAVTKTEDISISIAATLNVMLGHSEDAESKSTCNVNA 553
            HVQSLCIHEMI+RAFKHILQAVI+AV   E +++SIAA LN+MLG   + E   +CN + 
Sbjct: 717  HVQSLCIHEMIVRAFKHILQAVIAAVVNPEKLAMSIAAALNLMLGVPGNRELNQSCNAHP 776

Query: 554  LVWKWLQAFLMKRYDWELTSLNYLDVRKFAILRGLCHKMGIELAPRDFDMDSPTPFR 724
            LVW+WL+ FL KRY+W+ ++LNY DVRKFA+LRGLCHK+GIEL PRDFDMDSP PF+
Sbjct: 777  LVWRWLEVFLKKRYEWDFSTLNYKDVRKFAVLRGLCHKVGIELVPRDFDMDSPYPFQ 833


>ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]
          Length = 1846

 Score =  313 bits (802), Expect = 2e-83
 Identities = 159/231 (68%), Positives = 184/231 (79%)
 Frame = +2

Query: 32   KSSAEVEIAKSASLESQCETKDGDNXXXXXXXXXDAAFTRLKESETGLHCKSLQELIEMS 211
            K + E E +   S+ESQ ET + +N         D AFTRLKES TGLHCKS+ +LIE+S
Sbjct: 623  KFNREAESSPLPSIESQHETTEAENELVLKGMLSDEAFTRLKESGTGLHCKSMHDLIELS 682

Query: 212  QKYYNEVALQKLVADFGSLELSPVDGRTLTDFMHTRGLRMRSLGRVVKLSEKLSHVQSLC 391
            +KYY +VAL KLVADFGSLELSPVDGRTLTDFMHTRGLRM SLG VVKLSEKLSHVQSLC
Sbjct: 683  RKYYTDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLRMHSLGHVVKLSEKLSHVQSLC 742

Query: 392  IHEMIIRAFKHILQAVISAVTKTEDISISIAATLNVMLGHSEDAESKSTCNVNALVWKWL 571
            IHEMI+RAFKHIL+AVISAV K E ++ SIA  LN++LG  E+ ES  +  V+ LVWKWL
Sbjct: 743  IHEMIVRAFKHILRAVISAVDK-EKMASSIAGALNLLLGVPENRESDKSREVHPLVWKWL 801

Query: 572  QAFLMKRYDWELTSLNYLDVRKFAILRGLCHKMGIELAPRDFDMDSPTPFR 724
            + FL KR+DW+L  LNY DV+KFAILRGLCHK+GIEL PRDFDMDSP PF+
Sbjct: 802  ELFLKKRFDWDLNKLNYKDVKKFAILRGLCHKVGIELVPRDFDMDSPIPFQ 852


Top