BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025270
         (1988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   247   7e-63
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   243   2e-61
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...   238   3e-60
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   238   6e-60
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   238   6e-60

>ref|XP_003550361.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine max]
          Length = 427

 Score =  247 bits (631), Expect = 7e-63
 Identities = 150/417 (35%), Positives = 231/417 (55%), Gaps = 10/417 (2%)
 Frame = +2

Query: 476  DRISQLPKEVIDEIFKRLPIRDAVKTSMLSKPWRYKWMSMPELVFDNRSIPPSVQGN--- 646
            DRIS LP  VID++   L IR+AV+TS+LS  WRYKW ++P LVFD   +  + Q +   
Sbjct: 17   DRISCLPGHVIDQVLSHLSIREAVRTSVLSSKWRYKWATLPILVFDTHCVSVASQDHMII 76

Query: 647  -SSLVKFVNNVLLVHNGMISKFEINQFLTFGCSDVDRWILALSRKMVNNLALRFETLNDY 823
             + L++ +++VLL+H+G I+KF+++     G +D+DRW L L RK +    L       Y
Sbjct: 77   KNKLLRIIDHVLLLHSGPINKFKLSHRDLIGVTDIDRWTLHLCRKSIKEFVLEIWKGQRY 136

Query: 824  QLPSCLFSCQSLKSLKLEACILKLPSQFQELSCLTSLLLVRVNLTNETFESLLIKIPLLR 1003
            ++ SCLFSCQSL  L+L  C LK PS FQ    L SL L  V L  + FE+L+   PLL 
Sbjct: 137  KIHSCLFSCQSLTHLELFNCWLKPPSTFQGFKNLKSLDLQHVTLAQDVFENLISSCPLLE 196

Query: 1004 HLEVVLCESLTRFNINAPNLTSFWIVGPYPKINFQNAPSVIIVGINLWW---LNGIRTPC 1174
             L ++  +  T  NI+APNL  F I G +  I+F+N   + +V I L+    +N  R   
Sbjct: 197  RLTLMNFDGFTNLNIDAPNLLFFDIGGKFEDISFENTFQLAVVSIGLYLNFEINQSRLHG 256

Query: 1175 NIDEILR---GLNKLRRINICQPIVEFLRIDTAPEKLKTTYDHLLSVLLTVNFEDSKQLL 1345
                +L+    L  ++R+ +    +++L +   P KL      L  + + +NF D K++ 
Sbjct: 257  GSSNLLKFFVHLPHVQRLEVQSYFLKYLAVGVVPIKLPRPCIDLSYLSIRINFNDLKEIS 316

Query: 1346 AVLCLCRSSPQLKTLMIKAIKGRQAVILREAPFWEGRQKREGCIFHHLKTVRLFDFKGLQ 1525
            A LCL RSSP L+ L I A    Q V+L     WE       C    L+ V++    G++
Sbjct: 317  ASLCLLRSSPNLQELEILARPEEQTVLLTHTYCWE--DVYFSCPVMQLRYVKIDGISGIK 374

Query: 1526 QELGFAQFILLNAVVLETLSIKWEKNVHMDKELLHVFEKMMMFKRASSEAQVVFSSP 1696
             EL F  F+LL++ VLE +++K   NV      L + ++++ F+RAS +A++++  P
Sbjct: 375  PELDFINFLLLHSPVLERMTVKPVANVG-----LELMKELLRFRRASGQAEIIYLEP 426


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 426

 Score =  243 bits (619), Expect = 2e-61
 Identities = 155/435 (35%), Positives = 232/435 (53%), Gaps = 20/435 (4%)
 Frame = +2

Query: 452  KQSCFES-LDRISQLPKEVIDEIFKRLPIRDAVKTSMLSKPWRYKWMSMPELVFDNR--S 622
            K  C E+ LDRIS LP  V+D+I  +L IRDAV+TS LS+ WRYKW  +P LVFDN+  S
Sbjct: 7    KFPCLETELDRISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLVFDNKCVS 66

Query: 623  IPPSVQG--NSSLVKFVNNVLLVHNGMISKFEINQFLTFGCSDVDRWILALSRKMVNNLA 796
            IP   Q      LV  +++VLL+HNG I KF+++     G SD+DRWIL LSR  +    
Sbjct: 67   IPSQDQTLIKDKLVNIIDHVLLLHNGPIQKFKLSHRDLLGVSDIDRWILHLSRSSIKEFI 126

Query: 797  LRFETLNDYQLPSCLFSCQSLKSLKLEACILKLPSQFQELSCLTSLLLVRVNLTNETFES 976
            L       Y++PS LFS + L  L+L  C+L+ P  F+    L SL L  + LT   FE+
Sbjct: 127  LEIWKGQRYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNVFEN 186

Query: 977  LLIKIPLLRHLEVVLCESLTRFNINAPNLTSFWIVGPYPKINFQNAPSVIIVGINLWWLN 1156
            L+   PLL  L ++  +  T  NINAPNL  F I G Y  + F+N   + +V I L+   
Sbjct: 187  LIFSCPLLERLTLMNFDGFTHLNINAPNLQFFDIGGVYDDVTFENTFQLTLVSIGLY--V 244

Query: 1157 GIRTPCNI-----DEILR---GLNKLRRINICQPIVEFLRIDTAPEKLKTTYDHLLSVLL 1312
             ++   N+      ++LR    L  +RR+ +    +++L I   P +L      L  + +
Sbjct: 245  NVQNDRNVGHGSSSKLLRFFANLPHIRRLEVQSYFLKYLSIGNVPSRLPKPCFDLNYLSI 304

Query: 1313 TVNFEDSKQLLAVLCLCRSSPQLKTLMIKAIKGRQAVILREAPFWEGRQKREGCIFHHLK 1492
             +NF D ++  A LCL RSSP ++ L + A    Q  +     FWE        +F  L+
Sbjct: 305  RINFNDLEENSAALCLLRSSPNVQELEMLARPEEQTSLGTITNFWEDDHWNN--LFGQLR 362

Query: 1493 TVRLFDFKGLQQELGFAQFILLNAVVLETLSIK-------WEKNVHMDKELLHVFEKMMM 1651
             VR+    G++ EL F  F+L N+ VLE +++K       WE           + ++++ 
Sbjct: 363  LVRIVGISGIRCELDFMNFLLSNSPVLERMTVKPASSDGGWE-----------LIKELLR 411

Query: 1652 FKRASSEAQVVFSSP 1696
            F+RAS+ A++++  P
Sbjct: 412  FRRASARAEIIYLDP 426


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
            predicted protein [Populus trichocarpa]
          Length = 416

 Score =  238 bits (608), Expect = 3e-60
 Identities = 148/420 (35%), Positives = 230/420 (54%), Gaps = 12/420 (2%)
 Frame = +2

Query: 473  LDRISQLPKEVIDEIFKRLPIRDAVKTSMLSKPWRYKWMSMPELVFDNRSIPPSVQ---- 640
            LDRIS LP  V+D+I   LPIRDAV+TS LS+ WRY+W  +P LVFD +    + Q    
Sbjct: 5    LDRISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITSQDQTI 64

Query: 641  GNSSLVKFVNNVLLVHNGMISKFEINQFLTFGCSDVDRWILALSRKMVNNLALRFETLND 820
              ++LV  ++NVLL+HNG I KF+++     G SD+DRWIL LSR       L       
Sbjct: 65   AKNNLVNIIDNVLLLHNGPIYKFKLSHRDLLGVSDIDRWILHLSRGSTKEFVLEIWKGQR 124

Query: 821  YQLPSCLFSCQSLKSLKLEACILKLPSQFQELSCLTSLLLVRVNLTNETFESLLIKIPLL 1000
            Y+LPSCLFS ++L  L+L  C+LK P  F+    L SL L  V L  E FE+L+    LL
Sbjct: 125  YKLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFENLISSCALL 184

Query: 1001 RHLEVVLCESLTRFNINAPNLTSFWIVGPYPKINFQNAPSVIIVGINLWWLNGIRTPCNI 1180
              L ++  +  T   INAPNL  F I G +  ++F N   + +V I L+    ++   ++
Sbjct: 185  ERLTLMNFDGFTHLKINAPNLQFFDIGGIFDDVSFHNTSLLTLVSIGLY--ANVKNDRHV 242

Query: 1181 -----DEILR---GLNKLRRINICQPIVEFLRIDTAPEKLKTTYDHLLSVLLTVNFEDSK 1336
                  ++LR    L  LRR+ I    +++L I   P +L      L  + + +NF D +
Sbjct: 243  SRGSSSKLLRFFVNLPHLRRLEIQSYFIKYLAISKVPSRLPKPCMDLNYISIRINFNDFE 302

Query: 1337 QLLAVLCLCRSSPQLKTLMIKAIKGRQAVILREAPFWEGRQKREGCIFHHLKTVRLFDFK 1516
            +  A LC+ +S P L+ + +      QA +  +  FW   Q +  C+F  L+ V++    
Sbjct: 303  ENSAALCILKSCPNLQEIEMLGRPEEQADVEPQTGFWGDDQWK--CLFGQLRLVKIVGIS 360

Query: 1517 GLQQELGFAQFILLNAVVLETLSIKWEKNVHMDKELLHVFEKMMMFKRASSEAQVVFSSP 1696
            G++ EL   +F+L N+ VLE +++K   ++    EL+   ++++ F+RAS +A+V++  P
Sbjct: 361  GIRSELDCIKFLLSNSPVLEQMTVK-PASIEGGWELV---KELLRFRRASIQAEVIYLEP 416


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 428

 Score =  238 bits (606), Expect = 6e-60
 Identities = 152/417 (36%), Positives = 232/417 (55%), Gaps = 13/417 (3%)
 Frame = +2

Query: 476  DRISQLPKEVIDEIFKRLPIRDAVKTSMLSKPWRYKWMSMPELVFDNRSIPPSVQG---- 643
            DRIS LP  +ID+I   LPI++AV+TS+LS  WRYKW ++P LVFD++ I  + +     
Sbjct: 17   DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 76

Query: 644  NSSLVKFVNNVLLVHNGMISKFEINQFLTFGCSDVDRWILALSRKMVNNLALRFETLNDY 823
             S L + +++VLL+H+G I KF+++     G +D+DRW L L+R+ V    L       Y
Sbjct: 77   KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRY 136

Query: 824  QLPSCLFSCQSLKSLKLEACILKLPSQFQELSCLTSLLLVRVNLTNETFESLLIKIPLLR 1003
            ++PSCLFSCQ L  L+L  C L  PS FQ    L SL L  V L+ + FE+L+   PLL 
Sbjct: 137  KIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLE 196

Query: 1004 HLEVVLCESLTRFNINAPNLTSFWIVGPYPKINFQNAPSVIIVGINLW--------WLNG 1159
             L ++  +     NI+APNL  F I G +  I+F+N   + +V I L+         L+G
Sbjct: 197  RLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHG 256

Query: 1160 IRTPCNIDEILRGLNKLRRINICQPIVEFLRIDTAPEKLKTTYDHLLSVLLTVNFEDSKQ 1339
             RT  N+ E L  L +++R+ I    +++L +   P KL T    L  + + +NF DSK+
Sbjct: 257  -RT-SNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKE 314

Query: 1340 LLAVLCLCRSSPQLKTLMIKAIKGRQAV-ILREAPFWEGRQKREGCIFHHLKTVRLFDFK 1516
            + A LCL RSSP L+ L I A    Q + +   A  WE        +   ++ VR+    
Sbjct: 315  ISAALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWPVM--RVRHVRIDGIS 372

Query: 1517 GLQQELGFAQFILLNAVVLETLSIKWEKNVHMDKELLHVFEKMMMFKRASSEAQVVF 1687
            G++ EL F  FILL + VLE +++K   N   +     + ++++  +RAS  A+V++
Sbjct: 373  GIKPELDFISFILLYSPVLERMTVKPALNASPE-----LVKELLRLRRASGRAEVIY 424


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
            gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
            [Medicago truncatula]
          Length = 660

 Score =  238 bits (606), Expect = 6e-60
 Identities = 152/417 (36%), Positives = 232/417 (55%), Gaps = 13/417 (3%)
 Frame = +2

Query: 476  DRISQLPKEVIDEIFKRLPIRDAVKTSMLSKPWRYKWMSMPELVFDNRSIPPSVQG---- 643
            DRIS LP  +ID+I   LPI++AV+TS+LS  WRYKW ++P LVFD++ I  + +     
Sbjct: 249  DRISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVI 308

Query: 644  NSSLVKFVNNVLLVHNGMISKFEINQFLTFGCSDVDRWILALSRKMVNNLALRFETLNDY 823
             S L + +++VLL+H+G I KF+++     G +D+DRW L L+R+ V    L       Y
Sbjct: 309  KSKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRY 368

Query: 824  QLPSCLFSCQSLKSLKLEACILKLPSQFQELSCLTSLLLVRVNLTNETFESLLIKIPLLR 1003
            ++PSCLFSCQ L  L+L  C L  PS FQ    L SL L  V L+ + FE+L+   PLL 
Sbjct: 369  KIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLISTCPLLE 428

Query: 1004 HLEVVLCESLTRFNINAPNLTSFWIVGPYPKINFQNAPSVIIVGINLW--------WLNG 1159
             L ++  +     NI+APNL  F I G +  I+F+N   + +V I L+         L+G
Sbjct: 429  RLTLMNFDGFNYLNIHAPNLQFFDIGGKFEDISFKNTSQLAVVSIGLYVNFESSQGRLHG 488

Query: 1160 IRTPCNIDEILRGLNKLRRINICQPIVEFLRIDTAPEKLKTTYDHLLSVLLTVNFEDSKQ 1339
             RT  N+ E L  L +++R+ I    +++L +   P KL T    L  + + +NF DSK+
Sbjct: 489  -RT-SNLVEFLIHLPRIQRLEIQSYFLKYLALGAVPVKLPTPCIDLSYLSIRINFYDSKE 546

Query: 1340 LLAVLCLCRSSPQLKTLMIKAIKGRQAV-ILREAPFWEGRQKREGCIFHHLKTVRLFDFK 1516
            + A LCL RSSP L+ L I A    Q + +   A  WE        +   ++ VR+    
Sbjct: 547  ISAALCLFRSSPNLRELEILARPEEQPLPLAHHADCWEDVYLDWPVM--RVRHVRIDGIS 604

Query: 1517 GLQQELGFAQFILLNAVVLETLSIKWEKNVHMDKELLHVFEKMMMFKRASSEAQVVF 1687
            G++ EL F  FILL + VLE +++K   N   +     + ++++  +RAS  A+V++
Sbjct: 605  GIKPELDFISFILLYSPVLERMTVKPALNASPE-----LVKELLRLRRASGRAEVIY 656