BLASTX nr result

ID: Cimicifuga21_contig00025267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025267
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303439.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polyme...    90   2e-16
ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polyme...    88   6e-16
emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera]    88   6e-16
emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera]    87   1e-15

>ref|XP_002303439.1| predicted protein [Populus trichocarpa] gi|222840871|gb|EEE78418.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/109 (42%), Positives = 70/109 (64%), Gaps = 9/109 (8%)
 Frame = +1

Query: 163 LLQNYSNFIQSGPPHRVLLHENGEWVDFLEEGDIGLVDEGFSKNKTVLFEVVFRGTTYLA 342
           LL++YSNF+++G P R++ ++ GEW+DF ++  + L+ + F + K    EV   G  Y+ 
Sbjct: 65  LLRSYSNFMRTGMPQRLMCYQKGEWIDFPKDL-VALIRKDF-QGKKAFVEVELEGRCYVI 122

Query: 343 DFLHMLLIDIKTGSQQPIGWMNKAGKCFFPVNFT---------FHDCFK 462
           DFLHML +D+KTG QQPI W+++AG CFFP ++           HDC K
Sbjct: 123 DFLHMLRLDMKTGIQQPIAWIDEAGSCFFPESYADEDEPYLCCQHDCVK 171


>ref|XP_002276953.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
           vinifera]
          Length = 599

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 54/147 (36%), Positives = 85/147 (57%), Gaps = 8/147 (5%)
 Frame = +1

Query: 37  SKSASGQKRKRGGEEEDAHRFSID--KHAICCQQIII-YRNKNPP-----LLQNYSNFIQ 192
           S+   G KRKR  +   AH  +++  K+ +C ++ +  YR    P     LL+ YSNF++
Sbjct: 13  SRIVVGWKRKRAAQYA-AHLSALNSKKNRLCKRRKLDGYRMNYGPNFEKSLLKGYSNFMK 71

Query: 193 SGPPHRVLLHENGEWVDFLEEGDIGLVDEGFSKNKTVLFEVVFRGTTYLADFLHMLLIDI 372
           +  P R++ + NG+W DF  +  I LV + F   K+   EV   G  ++ DF+HM+ +D+
Sbjct: 72  TELPQRIMFYVNGDWKDF-PQNIITLVRKDFQVRKSYT-EVELNGNCFMLDFMHMVRVDM 129

Query: 373 KTGSQQPIGWMNKAGKCFFPVNFTFHD 453
           KTG QQPI W+++AG CF P  F+  D
Sbjct: 130 KTGLQQPIAWIDEAGNCFIPETFSGED 156


>ref|XP_002277020.2| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like [Vitis
           vinifera]
          Length = 598

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
 Frame = +1

Query: 148 NKNPPLLQNYSNFIQSGPPHRVLLHENGEWVDFLEEGDIGLVDEGFSKNKTVLFEVVFRG 327
           N    LL+ YSNF+++  P R++ + NGEW DF E+  +GLV + F   K+ + EV    
Sbjct: 55  NFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDL-VGLVKKDFQVKKSYI-EVELNN 112

Query: 328 TTYLADFLHMLLIDIKTGSQQPIGWMNKAGKCFFPVNFT----FHDC 456
             ++ DFLHM  +D+KTG ++PI W+++AG CFFP  F+     H+C
Sbjct: 113 NHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC 159


>emb|CAN81025.1| hypothetical protein VITISV_023316 [Vitis vinifera]
          Length = 857

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 4/107 (3%)
 Frame = +1

Query: 148 NKNPPLLQNYSNFIQSGPPHRVLLHENGEWVDFLEEGDIGLVDEGFSKNKTVLFEVVFRG 327
           N    LL+ YSNF+++  P R++ + NGEW DF E+  +GLV + F   K+ + EV    
Sbjct: 55  NFGKTLLKYYSNFMKTELPQRIMFYLNGEWTDFPEDL-VGLVKKDFQVKKSYI-EVELNN 112

Query: 328 TTYLADFLHMLLIDIKTGSQQPIGWMNKAGKCFFPVNFT----FHDC 456
             ++ DFLHM  +D+KTG ++PI W+++AG CFFP  F+     H+C
Sbjct: 113 NHFMIDFLHMKRVDLKTGMEKPIAWIDEAGNCFFPEIFSGDAESHNC 159


>emb|CAN61759.1| hypothetical protein VITISV_006105 [Vitis vinifera]
          Length = 604

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 8/147 (5%)
 Frame = +1

Query: 37  SKSASGQKRKRGGEEEDAHRFSID--KHAICCQQIII-YRNKNPP-----LLQNYSNFIQ 192
           S+   G KRKR  +   AH  +++  K+ +C ++ +  YR    P     LL+ YSNF++
Sbjct: 13  SRIVVGWKRKRAAQYA-AHLSALNSKKNRLCKRRKLDGYRMNYGPNFEKSLLKGYSNFMK 71

Query: 193 SGPPHRVLLHENGEWVDFLEEGDIGLVDEGFSKNKTVLFEVVFRGTTYLADFLHMLLIDI 372
           +  P  ++ + NG+W DF  +  I LV + F   K+   EV   G  ++ DF+HM+ +D+
Sbjct: 72  TELPQXIMFYVNGDWXDF-PQNIITLVRKDFQVRKSYT-EVELNGNCFMLDFMHMVRVDM 129

Query: 373 KTGSQQPIGWMNKAGKCFFPVNFTFHD 453
           KTG QQPI W+++AG CF P  F+  D
Sbjct: 130 KTGLQQPIAWIDEAGNCFXPETFSGED 156


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