BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025259
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
emb|CBI30729.3| unnamed protein product [Vitis vinifera]               80   1e-13
ref|XP_003628879.1| Pentatricopeptide repeat-containing protein ...    79   5e-13

>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
 Frame = -3

Query: 282 DSSTFTWNTLFRT----SPPHHALSLYANMLQSNAHPNKFTFTFLIKACNKISKPNLGIH 115
           + STF WNT+ +     +    A SLY +ML+SN  PN FTF+F+I+AC  +    +G+ 
Sbjct: 74  NKSTFIWNTMMQAFVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLC 133

Query: 114 LHSHLIKFGFGSDAFLQSSLIGTYADAGLMNIAQQLFD 1
            H  ++KFG+ S  F+Q+ LI  YA+ G M++A+ +FD
Sbjct: 134 FHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFD 171


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
 Frame = -3

Query: 282 DSSTFTWNTLFR----TSPPHHALSLYANMLQSNAHPNKFTFTFLIKACNKISKPNLGIH 115
           + + F WN++ R    +  P  AL  +  M+ S   PN +TF FL+K+C K++  + G  
Sbjct: 91  EPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQ 150

Query: 114 LHSHLIKFGFGSDAFLQSSLIGTYADAGLMNIAQQLFD 1
           +H+H++K GF SD F+ +SLI  YA +G MN AQ +FD
Sbjct: 151 IHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFD 188


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
 Frame = -3

Query: 339 SMPQLHRINPINCLTKLPNDSSTFTWNTLFRT---SP-PHHALSLYANMLQSNAHPNKFT 172
           ++P  H I      +++PN +S + WNT+ R    SP P  AL+++  ML ++  P+K+T
Sbjct: 57  AIPYAHSI-----FSRIPNPNS-YMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYT 110

Query: 171 FTFLIKACNKISKPNLGIHLHSHLIKFGFGSDAFLQSSLIGTYADAGLMNIAQQLFD 1
           FTF +K+C   S    G  +H H++K G G D F+Q++LI  YA  G +  A+ L D
Sbjct: 111 FTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLD 167


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
 Frame = -3

Query: 339 SMPQLHRINPINCLTKLPNDSSTFTWNTLFRT---SP-PHHALSLYANMLQSNAHPNKFT 172
           ++P  H I      +++PN +S + WNT+ R    SP P  AL+++  ML ++  P+K+T
Sbjct: 57  AIPYAHSI-----FSRIPNPNS-YMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYT 110

Query: 171 FTFLIKACNKISKPNLGIHLHSHLIKFGFGSDAFLQSSLIGTYADAGLMNIAQQLFD 1
           FTF +K+C   S    G  +H H++K G G D F+Q++LI  YA  G +  A+ L D
Sbjct: 111 FTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLD 167


>ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522901|gb|AET03355.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 633

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 7/97 (7%)
 Frame = -3

Query: 270 FTWNTLFRT-----SPPHHALSLYANMLQSNAHPNKFTFTFLIKACNK--ISKPNLGIHL 112
           F WN + +      SPP H  SL+  ML S+  P+ FTF FL+KAC    IS P  G  +
Sbjct: 81  FLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANVLISAPQFGFQV 140

Query: 111 HSHLIKFGFGSDAFLQSSLIGTYADAGLMNIAQQLFD 1
           H H+++ GFGSD F+ ++L+  Y   G +  A ++FD
Sbjct: 141 HCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFD 177