BLASTX nr result
ID: Cimicifuga21_contig00025230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00025230
(587 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFN88207.1| integrase core domain containing protein [Phaseol... 110 2e-47
emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera] 102 6e-44
emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera] 102 8e-44
emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera] 100 2e-43
emb|CAN73234.1| hypothetical protein VITISV_033857 [Vitis vinifera] 100 2e-43
>gb|AFN88207.1| integrase core domain containing protein [Phaseolus vulgaris]
Length = 1387
Score = 110 bits (275), Expect(2) = 2e-47
Identities = 56/100 (56%), Positives = 66/100 (66%)
Frame = +2
Query: 5 GLVCKLEKSLYRLKQSPRAWFEKFNRVVVANGMARSTYNHSIFYSRTSAGXXXXXXXXXX 184
GLVC+L KSLY LKQSPRAWF KF+ VV GM RS +HS+FY +S G
Sbjct: 1014 GLVCRLRKSLYGLKQSPRAWFGKFSNVVQQFGMTRSEADHSVFYRHSSVGCIYLVVYVDD 1073
Query: 185 XXXKGSDDHGIKLLKGQLCKHFQTKDLRKLQHFLGIEVFQ 304
GSD HGI +K LC++FQTKDL KL++FLGIEV Q
Sbjct: 1074 IVLTGSDHHGISQVKQHLCQNFQTKDLGKLRYFLGIEVAQ 1113
Score = 104 bits (259), Expect(2) = 2e-47
Identities = 55/91 (60%), Positives = 69/91 (75%)
Frame = +1
Query: 313 LYLSPCKYVLDLLSEKGYLGSRPVDTPMNPNHKLHFDQGELLSDVESYRRLVGKLIYLTI 492
+ +S KY LD+L E G + S+ VDTPM+PN KL +QGE LSD E YRRLVGKL YLT+
Sbjct: 1118 IVISQRKYALDILEEIGLMNSKSVDTPMDPNVKLLPNQGEPLSDPEKYRRLVGKLNYLTV 1177
Query: 493 TRPNISFAVSVVSEYMHALRVPHLQAVIRIL 585
TRP+ISFAVSVVS+++++ H AVIRIL
Sbjct: 1178 TRPDISFAVSVVSQFLNSPCEDHWNAVIRIL 1208
>emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]
Length = 1253
Score = 102 bits (254), Expect(2) = 6e-44
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = +1
Query: 301 SAAVLYLSPCKYVLDLLSEKGYLGSRPVDTPMNPNHKLHFDQGELLSDVESYRRLVGKLI 480
S++ + LS KY LD+L E G L +PVDTPM+PN KL QGE L D YRRLVGKL
Sbjct: 980 SSSXVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVXGQGEPLGDPGRYRRLVGKLN 1039
Query: 481 YLTITRPNISFAVSVVSEYMHALRVPHLQAVIRIL 585
YLTITRP+ISF VSVVS+++ + H AVIRIL
Sbjct: 1040 YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRIL 1074
Score = 100 bits (250), Expect(2) = 6e-44
Identities = 54/101 (53%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +2
Query: 5 GLVCKLEKSLYRLKQSPRAWFEKFNRVVVANGMARSTYNHSIFYSRTSAG-XXXXXXXXX 181
GLVC+L +SLY LKQSPRAWF +F+ VV GM RST +HS+FY S G
Sbjct: 879 GLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVD 938
Query: 182 XXXXKGSDDHGIKLLKGQLCKHFQTKDLRKLQHFLGIEVFQ 304
GSD GI+ LK L HFQTKDL KL++FLGIE+ Q
Sbjct: 939 DIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 979
>emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]
Length = 1354
Score = 102 bits (253), Expect(2) = 8e-44
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = +1
Query: 301 SAAVLYLSPCKYVLDLLSEKGYLGSRPVDTPMNPNHKLHFDQGELLSDVESYRRLVGKLI 480
S++ + LS KY LD+L E G L +PVDTPM+PN KL QGE L D YRRLVGKL
Sbjct: 1061 SSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVLGQGEPLGDPGRYRRLVGKLN 1120
Query: 481 YLTITRPNISFAVSVVSEYMHALRVPHLQAVIRIL 585
YLTITRP+ISF VSVVS+++ + H AVIRIL
Sbjct: 1121 YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRIL 1155
Score = 100 bits (250), Expect(2) = 8e-44
Identities = 54/101 (53%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +2
Query: 5 GLVCKLEKSLYRLKQSPRAWFEKFNRVVVANGMARSTYNHSIFYSRTSAG-XXXXXXXXX 181
GLVC+L +SLY LKQSPRAWF +F+ VV GM RST +HS+FY S G
Sbjct: 960 GLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVD 1019
Query: 182 XXXXKGSDDHGIKLLKGQLCKHFQTKDLRKLQHFLGIEVFQ 304
GSD GI+ LK L HFQTKDL KL++FLGIE+ Q
Sbjct: 1020 DIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 1060
>emb|CAN78616.1| hypothetical protein VITISV_003658 [Vitis vinifera]
Length = 2172
Score = 100 bits (250), Expect(2) = 2e-43
Identities = 54/101 (53%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Frame = +2
Query: 5 GLVCKLEKSLYRLKQSPRAWFEKFNRVVVANGMARSTYNHSIFYSRTSAG-XXXXXXXXX 181
GLVC+L +SLY LKQSPRAWF +F+ VV GM RST +HS+FY S G
Sbjct: 1636 GLVCRLRRSLYGLKQSPRAWFSRFSSVVQEFGMLRSTADHSVFYHHNSLGQCIYLVVYVD 1695
Query: 182 XXXXKGSDDHGIKLLKGQLCKHFQTKDLRKLQHFLGIEVFQ 304
GSD GI+ LK L HFQTKDL KL++FLGIE+ Q
Sbjct: 1696 DIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 1736
Score = 100 bits (249), Expect(2) = 2e-43
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = +1
Query: 301 SAAVLYLSPCKYVLDLLSEKGYLGSRPVDTPMNPNHKLHFDQGELLSDVESYRRLVGKLI 480
S++ + LS KY LD+L E G L +PVDTPM+PN KL QGE L D YRRLVGKL
Sbjct: 1737 SSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLN 1796
Query: 481 YLTITRPNISFAVSVVSEYMHALRVPHLQAVIRIL 585
YLTITRP+ISF VSVVS+++ + H AVIRIL
Sbjct: 1797 YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRIL 1831
>emb|CAN73234.1| hypothetical protein VITISV_033857 [Vitis vinifera]
Length = 1402
Score = 100 bits (250), Expect(2) = 2e-43
Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Frame = +2
Query: 5 GLVCKLEKSLYRLKQSPRAWFEKFNRVVVANGMARSTYNHSIFYSRTSAG-XXXXXXXXX 181
GLVC+L +SLY LKQSPRAWF F+ VV GM RST +HS+FY S G
Sbjct: 1028 GLVCRLRRSLYGLKQSPRAWFSXFSSVVQEFGMLRSTABHSVFYHHNSLGQCIYLVVYVD 1087
Query: 182 XXXXKGSDDHGIKLLKGQLCKHFQTKDLRKLQHFLGIEVFQ 304
GSD GI+ LK L HFQTKDL KL++FLGIE+ Q
Sbjct: 1088 DIVITGSDQDGIQKLKQHLFTHFQTKDLGKLKYFLGIEIAQ 1128
Score = 100 bits (249), Expect(2) = 2e-43
Identities = 56/95 (58%), Positives = 67/95 (70%)
Frame = +1
Query: 301 SAAVLYLSPCKYVLDLLSEKGYLGSRPVDTPMNPNHKLHFDQGELLSDVESYRRLVGKLI 480
S++ + LS KY LD+L E G L +PVDTPM+PN KL QGE L D YRRLVGKL
Sbjct: 1129 SSSGVVLSQRKYALDILEETGXLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLN 1188
Query: 481 YLTITRPNISFAVSVVSEYMHALRVPHLQAVIRIL 585
YLTITRP+ISF VSVVS+++ + H AVIRIL
Sbjct: 1189 YLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRIL 1223