BLASTX nr result

ID: Cimicifuga21_contig00025218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025218
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28477.3| unnamed protein product [Vitis vinifera]               97   5e-18
ref|XP_003544015.1| PREDICTED: uncharacterized protein LOC100789...    88   2e-15
ref|XP_003556774.1| PREDICTED: uncharacterized protein LOC100808...    87   3e-15
ref|NP_671774.4| uncharacterized protein [Arabidopsis thaliana] ...    87   5e-15
dbj|BAE71230.1| hypothetical protein [Trifolium pratense]              86   9e-15

>emb|CBI28477.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 78/223 (34%), Positives = 112/223 (50%), Gaps = 10/223 (4%)
 Frame = +2

Query: 134  HTDLQSHQTLH---EKFSAQDVGSS-GRKRRIDAIEPTDNNSDEIG-NKNPKITIQLGGC 298
            H     HQ LH    +FS QDV +S GRKRR + +   D +++ +   ++PKI  + GG 
Sbjct: 496  HGSGDCHQGLHISQMQFSKQDVENSPGRKRRSEELVLKDVDNELVSIQRSPKIH-KGGGR 554

Query: 299  ASESWLDHCPVGNHEVEKYGGFEAQGHWINALKELPRAVERLLSPSIGKLNNRELDILED 478
             S S L+     N   E+ G +     W +   +     +++LSP I  LN R + +LED
Sbjct: 555  DSRSLLELSDRSNKHTERMGDYTPLTDWADIFSKFSEDTKQILSPLIDNLNLRAISLLED 614

Query: 479  MLTRMQKATKYEKLSILVQFQ----RSADLLANSHQGRIAEARCLEKTLVYEQAKLILLR 646
            +L  +QK   +E     +Q Q     S     N    R AE R L   + YEQAK  L+ 
Sbjct: 615  ILLDLQKVRAHEMFFSEIQSQAGKINSQACYYNLTHKRAAETRFLLSKMAYEQAKQQLMC 674

Query: 647  TKQERLRKRVQQVLSGIQEAQNLKLRVKNVLQ-NGAKVAQNKD 772
             K+E+L +RVQ + SGIQE+Q LK+     L   GA+ AQ  D
Sbjct: 675  VKREKLLERVQLLSSGIQESQMLKMNSFQCLSLPGARDAQVDD 717


>ref|XP_003544015.1| PREDICTED: uncharacterized protein LOC100789038 [Glycine max]
          Length = 1130

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 3/196 (1%)
 Frame = +2

Query: 194  SSGRKRRIDAIEPTDNNSDEIGNKNPKITIQLGGCASESWL-DHCPVGNHEVEKYGGFEA 370
            SSG+KR+   I   ++N D+IG  +  + +   G      L +       E EK G  + 
Sbjct: 652  SSGKKRKGVEILSNEDNIDKIGRIDRSLEVHKSGNGDLLLLSEQTGYMRSEREKLGD-QT 710

Query: 371  QGHWINALKELPRAVERLLSPSIGKLNNRELDILEDMLTRMQKATKYEKLSILVQFQ-RS 547
                   LK+      +LL PS+ KLN R +  LED+L  +QK  K E L   +Q Q + 
Sbjct: 711  SNDGDLILKKFLARTNQLLPPSVDKLNLRSIGRLEDILVHLQKVKKKEILCSEIQSQLKI 770

Query: 548  ADLLANSHQGRIAEARCLEKTLVYEQAKLILLRTKQERLRKRVQQVLSGIQEAQNLKLR- 724
             D L      R+AE R L   + YE+AKL LL  K ++L+K+VQQV SG+QE + +KL  
Sbjct: 771  TDPLNILRDKRVAETRTLLYNIAYEKAKLQLLHVKHDKLQKKVQQVSSGLQECEMIKLNS 830

Query: 725  VKNVLQNGAKVAQNKD 772
            + +  ++GA   Q  D
Sbjct: 831  IPSSSKSGAMDTQAGD 846


>ref|XP_003556774.1| PREDICTED: uncharacterized protein LOC100808104 [Glycine max]
          Length = 1078

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 4/257 (1%)
 Frame = +2

Query: 14   VVQDTVRKQTESLSESDRLHPFLRKGPLSFTHIQSSNGVGHTDLQSHQTLHEKFSAQDVG 193
            V Q  + K   S+S   +L        LS       +G+ ++   + Q      +   + 
Sbjct: 539  VAQSPLTKSGISISSGKKLQDSPNVQDLSPKSNLDGHGLHNSYHSALQVAQSPLTKSGIN 598

Query: 194  -SSGRKRRIDAIEPTDNNSDEIGNKNPKITIQLGGCASESWLDHCPVGNHEVEKYG-GFE 367
             SSG+KR+   I    +N D+IG       +   G      L    +G+   E+   G +
Sbjct: 599  ISSGKKRKGVEIRSNGDNIDKIGRIGRSPEVHKSGNGDLQLLSE-QIGSMRSEREKLGDQ 657

Query: 368  AQGHWINALKELPRAVERLLSPSIGKLNNRELDILEDMLTRMQKATKYEKLSILVQFQ-R 544
                    LK+      +LL PS+ KLN R +  LED+L  + K  K E L   +Q Q +
Sbjct: 658  TLNDGDLILKKFLARTNQLLPPSVDKLNLRSISRLEDILVHLHKVKKKESLCSEIQSQLK 717

Query: 545  SADLLANSHQGRIAEARCLEKTLVYEQAKLILLRTKQERLRKRVQQVLSGIQEAQNLKLR 724
              D L      R+AE R L   + YE+AKL LL  K ++L+K+VQQV SG+QE + +KL 
Sbjct: 718  ITDPLNILRDKRVAETRTLLYDIAYEKAKLQLLHVKHDKLQKKVQQVSSGLQECETIKLN 777

Query: 725  -VKNVLQNGAKVAQNKD 772
             + +  ++GA   Q  D
Sbjct: 778  SIPSSSKSGAMDTQADD 794


>ref|NP_671774.4| uncharacterized protein [Arabidopsis thaliana]
            gi|330250716|gb|AEC05810.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 1253

 Score = 86.7 bits (213), Expect = 5e-15
 Identities = 60/212 (28%), Positives = 105/212 (49%)
 Frame = +2

Query: 107  HIQSSNGVGHTDLQSHQTLHEKFSAQDVGSSGRKRRIDAIEPTDNNSDEIGNKNPKITIQ 286
            ++ S++G    D   ++  H K      G S  KR+ + ++    N      ++ K    
Sbjct: 761  NLPSTSGSSSVDRSKNEASHAK------GPSRLKRKAEDVDCAARNCSPKVERSTKYI-- 812

Query: 287  LGGCASESWLDHCPVGNHEVEKYGGFEAQGHWINALKELPRAVERLLSPSIGKLNNRELD 466
                 S S ++H P GN +         Q +W+    ++ + + ++L+P   KLN+R + 
Sbjct: 813  -----SNSVMEH-PDGNIDANDCRRVREQVNWVEIPGKVSKEINQMLAPLADKLNSRLIC 866

Query: 467  ILEDMLTRMQKATKYEKLSILVQFQRSADLLANSHQGRIAEARCLEKTLVYEQAKLILLR 646
             LED+LT M+K    E L + +Q Q+  D L+ +   R  E+R L   L Y++AKL LL 
Sbjct: 867  KLEDILTHMKKVHLCEMLCLQIQSQKVCDHLSGAKTKRRVESRSLLCKLAYDKAKLELLH 926

Query: 647  TKQERLRKRVQQVLSGIQEAQNLKLRVKNVLQ 742
             K+E + K+ Q V +G+Q ++ L+L   N L+
Sbjct: 927  LKKEIMMKKFQAVSTGVQTSETLRLNCANFLR 958


>dbj|BAE71230.1| hypothetical protein [Trifolium pratense]
          Length = 957

 Score = 85.9 bits (211), Expect = 9e-15
 Identities = 56/175 (32%), Positives = 93/175 (53%)
 Frame = +2

Query: 194 SSGRKRRIDAIEPTDNNSDEIGNKNPKITIQLGGCASESWLDHCPVGNHEVEKYGGFEAQ 373
           SSG+KR+   +    ++ ++ G  +    +   G     ++        E EK+G  +  
Sbjct: 474 SSGKKRKGVQLLSNGDDIEKTGRIDRNQEVHKSGDGDLQFVLEQTSMRSEREKFGD-QKW 532

Query: 374 GHWINALKELPRAVERLLSPSIGKLNNRELDILEDMLTRMQKATKYEKLSILVQFQRSAD 553
             + + L+    + ++LLSPS  KLN R +  LED+L R+QK  K++ LS  +  Q+  D
Sbjct: 533 NDFDHVLERFSTSTKQLLSPSFDKLNFRLIGTLEDILVRLQKVKKWDILSSEIHSQKLTD 592

Query: 554 LLANSHQGRIAEARCLEKTLVYEQAKLILLRTKQERLRKRVQQVLSGIQEAQNLK 718
            L      R+ E + L   + YE+AKL L+  K+ERL ++VQQ+ SG+QE Q +K
Sbjct: 593 PLDIPRHKRVVEMKLLLFNIAYEKAKLQLMNVKRERLLEKVQQLSSGLQETQMMK 647


Top