BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025209
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...   205   3e-51
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]   203   1e-50
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...   202   2e-50
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containi...   192   3e-47

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score =  205 bits (522), Expect = 3e-51
 Identities = 96/145 (66%), Positives = 122/145 (84%)
 Frame = +2

Query: 17  LCRYIEEHGFSCSLVSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISALC 196
           +C Y+EEHGFS SL+SFNTL+H VQKSD   LVWKIYE+MI  R YPNE++  +MISALC
Sbjct: 178 VCCYLEEHGFSLSLISFNTLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALC 237

Query: 197 KQGKLQKSVDVLDRIHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDDV 376
           K+G LQK VD+LDRIHGKRCSP+VIVNT +IF MLEEGR+++G++ LKR+LQKN+I+D +
Sbjct: 238 KEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTI 297

Query: 377 AYSLIIFAKLKINNLVSALELYDEM 451
           +YSLI +AK+K   L SA E+Y+EM
Sbjct: 298 SYSLIAYAKVKYGTLDSAWEVYEEM 322



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/111 (22%), Positives = 60/111 (54%)
 Frame = +2

Query: 59  VSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISALCKQGKLQKSVDVLDR 238
           +S++ + ++  K    +  W++YE M+ R  +PN     + I + C +G+++++ +++  
Sbjct: 297 ISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQD 356

Query: 239 IHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDDVAYSLI 391
           +      P       LI G  + GR++EG+   +RM+Q+ ++    A++L+
Sbjct: 357 MENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLM 407


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score =  203 bits (516), Expect = 1e-50
 Identities = 95/145 (65%), Positives = 121/145 (83%)
 Frame = +2

Query: 17  LCRYIEEHGFSCSLVSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISALC 196
           +C Y+EEHGFS SL+SFN L+H VQKSD   LVWKIYE+MI  R YPNE++  +MISALC
Sbjct: 178 VCCYLEEHGFSLSLISFNXLLHVVQKSDNYPLVWKIYEHMIRVRKYPNEVSVSVMISALC 237

Query: 197 KQGKLQKSVDVLDRIHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDDV 376
           K+G LQK VD+LDRIHGKRCSP+VIVNT +IF MLEEGR+++G++ LKR+LQKN+I+D +
Sbjct: 238 KEGALQKFVDMLDRIHGKRCSPIVIVNTCMIFRMLEEGRVEQGMLILKRLLQKNMILDTI 297

Query: 377 AYSLIIFAKLKINNLVSALELYDEM 451
           +YSLI +AK+K   L SA E+Y+EM
Sbjct: 298 SYSLIAYAKVKYGTLDSAWEVYEEM 322



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/111 (22%), Positives = 60/111 (54%)
 Frame = +2

Query: 59  VSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISALCKQGKLQKSVDVLDR 238
           +S++ + ++  K    +  W++YE M+ R  +PN     + I + C +G+++++ +++  
Sbjct: 297 ISYSLIAYAKVKYGTLDSAWEVYEEMLNRGFHPNAFVYTLFIGSHCVEGRIEEANELMQD 356

Query: 239 IHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDDVAYSLI 391
           +      P       LI G  + GR++EG+   +RM+Q+ ++    A++L+
Sbjct: 357 MENAGLMPYDETFNLLIAGCSKAGRLEEGLRLCERMMQRGLVPSCWAFNLM 407


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  202 bits (515), Expect = 2e-50
 Identities = 95/145 (65%), Positives = 120/145 (82%)
 Frame = +2

Query: 17  LCRYIEEHGFSCSLVSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISALC 196
           +C Y+EEHGF  SL+SFNTLIH VQKSD+  LVWKIYE+MI +R YPNE T R MI+ALC
Sbjct: 186 ICFYLEEHGFFLSLLSFNTLIHVVQKSDQYPLVWKIYEHMIHKRIYPNEATIRTMINALC 245

Query: 197 KQGKLQKSVDVLDRIHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDDV 376
           K+GKLQ  VD+LDRIHGKRC P+VI+N  ++F +L+EGR+D G+  LK MLQKN+I+D V
Sbjct: 246 KEGKLQMFVDILDRIHGKRCRPLVIINACMVFRILQEGRVDVGIGILKGMLQKNMILDTV 305

Query: 377 AYSLIIFAKLKINNLVSALELYDEM 451
           AYSLI+FAK+++ NL SALE+Y+ M
Sbjct: 306 AYSLIVFAKVRLGNLDSALEVYEAM 330


>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  201 bits (511), Expect = 5e-50
 Identities = 94/145 (64%), Positives = 122/145 (84%)
 Frame = +2

Query: 17  LCRYIEEHGFSCSLVSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISALC 196
           +C  +EEH F+ SL+SFNTLIH VQKSD++ L WKIYE+M+ RRTYPNE T   MISALC
Sbjct: 185 VCCRLEEHRFTLSLISFNTLIHVVQKSDKSPLAWKIYEHMLHRRTYPNEATIESMISALC 244

Query: 197 KQGKLQKSVDVLDRIHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDDV 376
           K+GKLQ  V++LD+IHGKRCSPVVIVNT L+F +LEEGR++ G+  LK ML+KN+I+D V
Sbjct: 245 KEGKLQTIVNMLDKIHGKRCSPVVIVNTCLVFRILEEGRVEPGLALLKMMLRKNMILDTV 304

Query: 377 AYSLIIFAKLKINNLVSALELYDEM 451
           AYSLI++AK+K+ NL SA+++Y+EM
Sbjct: 305 AYSLIVYAKVKLGNLNSAMQVYEEM 329


>ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cucumis sativus]
          Length = 539

 Score =  192 bits (487), Expect = 3e-47
 Identities = 86/145 (59%), Positives = 120/145 (82%)
 Frame = +2

Query: 17  LCRYIEEHGFSCSLVSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISALC 196
           +C ++EE GFS SL+SFNTLIH V+KSD+N  VWKIYE MI +R YPN +T RIMI++LC
Sbjct: 181 VCSHLEERGFSLSLISFNTLIHVVEKSDQNLKVWKIYEQMIRKRVYPNAITVRIMINSLC 240

Query: 197 KQGKLQKSVDVLDRIHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDDV 376
           K+GKLQ++ D+L+RIHG RCS  +IVN  LI+ +LEEGR+++G+  LKRMLQKN+++DD+
Sbjct: 241 KEGKLQETSDMLNRIHGSRCSASLIVNACLIYRILEEGRVEDGITLLKRMLQKNMVLDDI 300

Query: 377 AYSLIIFAKLKINNLVSALELYDEM 451
           AYSLI++AK+K  ++ S  E+++EM
Sbjct: 301 AYSLIVYAKVKTGSITSTWEVFEEM 325



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/146 (26%), Positives = 69/146 (47%)
 Frame = +2

Query: 14  TLCRYIEEHGFSCSLVSFNTLIHSVQKSDRNELVWKIYEYMIERRTYPNEMTARIMISAL 193
           ++C  + E GF  S   FN  I  + +    +    +   ++++   P+E T   +I   
Sbjct: 390 SMCEKMLERGFLPSCSVFNVAIAKICEKGDVKKANALLTILLDKGFLPDETTYTNLIIGY 449

Query: 194 CKQGKLQKSVDVLDRIHGKRCSPVVIVNTSLIFGMLEEGRIDEGVVFLKRMLQKNIIIDD 373
            K G++Q+ + +   +  +  SP V V  +LI  + + GR++E   +LK +   ++    
Sbjct: 450 RKSGEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRLEEAEKYLKIVKDSSLTPCL 509

Query: 374 VAYSLIIFAKLKINNLVSALELYDEM 451
             Y  +I   LK  N   ALELY+EM
Sbjct: 510 SIYQALILFYLKKGNRAKALELYNEM 535