BLASTX nr result
ID: Cimicifuga21_contig00025205
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00025205 (265 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|2... 90 2e-16 gb|ABI84259.1| tryptophan synthase alpha chain [Arachis hypogaea] 88 6e-16 ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase... 86 4e-15 ref|XP_002877992.1| alpha subunit of tryptophan synthase [Arabid... 84 2e-14 >ref|XP_002307623.1| predicted protein [Populus trichocarpa] gi|222857072|gb|EEE94619.1| predicted protein [Populus trichocarpa] Length = 310 Score = 90.1 bits (222), Expect = 2e-16 Identities = 54/83 (65%), Positives = 62/83 (74%), Gaps = 1/83 (1%) Frame = -1 Query: 247 MANALK-TSTFLQYGKLQNQAFRVPSQNPIVSFKSIIPMASLSAVPSLSISETFTKLKQQ 71 MA ALK T +FLQ K + F V ++ PIVS + PMASL+A SL I ETF+ LK+Q Sbjct: 1 MAVALKSTPSFLQLKKPETY-FIVRNKPPIVSTRRFAPMASLTATRSLGIGETFSNLKKQ 59 Query: 70 GKVALIPYITAGDPDLSTTAEAL 2 GKVALIPYITAGDPDLSTTAEAL Sbjct: 60 GKVALIPYITAGDPDLSTTAEAL 82 >gb|ABI84259.1| tryptophan synthase alpha chain [Arachis hypogaea] Length = 263 Score = 88.2 bits (217), Expect = 6e-16 Identities = 49/84 (58%), Positives = 63/84 (75%), Gaps = 2/84 (2%) Frame = -1 Query: 247 MANALKTSTFLQYGK--LQNQAFRVPSQNPIVSFKSIIPMASLSAVPSLSISETFTKLKQ 74 MA ALK++ FLQ K + Q F +PS+ IVS K P+A++ + ++ +SETFT+LK+ Sbjct: 1 MAIALKSACFLQLKKPEVNFQGF-LPSKRAIVSVKRYTPVAAIKTMETVGLSETFTRLKK 59 Query: 73 QGKVALIPYITAGDPDLSTTAEAL 2 QGKVA IPYITAGDPDLSTTAEAL Sbjct: 60 QGKVAFIPYITAGDPDLSTTAEAL 83 >ref|XP_002300807.1| predicted protein [Populus trichocarpa] gi|222842533|gb|EEE80080.1| predicted protein [Populus trichocarpa] Length = 310 Score = 87.0 bits (214), Expect = 1e-15 Identities = 52/83 (62%), Positives = 60/83 (72%), Gaps = 1/83 (1%) Frame = -1 Query: 247 MANALK-TSTFLQYGKLQNQAFRVPSQNPIVSFKSIIPMASLSAVPSLSISETFTKLKQQ 71 MA ALK T +FLQ K + F V + IVS + PMASL+A+ SL I ETF+ LK+Q Sbjct: 1 MAAALKSTPSFLQLKKPETH-FLVRHKPTIVSTRRFAPMASLTAIRSLGIGETFSNLKKQ 59 Query: 70 GKVALIPYITAGDPDLSTTAEAL 2 GKVALIPYITAGDPDL TTAEAL Sbjct: 60 GKVALIPYITAGDPDLKTTAEAL 82 >ref|XP_002281599.1| PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic [Vitis vinifera] Length = 316 Score = 85.5 bits (210), Expect = 4e-15 Identities = 43/67 (64%), Positives = 53/67 (79%) Frame = -1 Query: 202 LQNQAFRVPSQNPIVSFKSIIPMASLSAVPSLSISETFTKLKQQGKVALIPYITAGDPDL 23 L F PS VSFK+ PMA+++AVP++ +SETF KL++QG+VALIPYITAGDPDL Sbjct: 22 LFGSGFGFPSTRLSVSFKAFKPMAAVAAVPAVGLSETFDKLRKQGQVALIPYITAGDPDL 81 Query: 22 STTAEAL 2 STTAEAL Sbjct: 82 STTAEAL 88 >ref|XP_002877992.1| alpha subunit of tryptophan synthase [Arabidopsis lyrata subsp. lyrata] gi|297323830|gb|EFH54251.1| alpha subunit of tryptophan synthase [Arabidopsis lyrata subsp. lyrata] Length = 313 Score = 83.6 bits (205), Expect = 2e-14 Identities = 48/85 (56%), Positives = 58/85 (68%), Gaps = 3/85 (3%) Frame = -1 Query: 247 MANALKTSTFLQYGKLQNQAFRVPSQNP--IVSFKSIIPMASLS-AVPSLSISETFTKLK 77 MA A K+ F FR S +P +SFK PMASLS + P+L +++TFT+LK Sbjct: 1 MAIAFKSGVFFLQSPKSQIGFRHASSSPDSSLSFKRFTPMASLSTSSPTLGLADTFTQLK 60 Query: 76 QQGKVALIPYITAGDPDLSTTAEAL 2 +QGKVA IPYITAGDPDLSTTAEAL Sbjct: 61 KQGKVAFIPYITAGDPDLSTTAEAL 85