BLASTX nr result

ID: Cimicifuga21_contig00025186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025186
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517379.1| conserved hypothetical protein [Ricinus comm...   203   1e-50
ref|XP_002324017.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
emb|CBI34962.3| unnamed protein product [Vitis vinifera]              199   2e-49
emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera]   198   4e-49
ref|XP_002275185.1| PREDICTED: uncharacterized protein LOC100257...   196   2e-48

>ref|XP_002517379.1| conserved hypothetical protein [Ricinus communis]
           gi|223543390|gb|EEF44921.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 418

 Score =  203 bits (517), Expect = 1e-50
 Identities = 88/127 (69%), Positives = 106/127 (83%)
 Frame = +2

Query: 167 ESCDLFNGRWIPELNGPLYTSHSCLTIPDSKNCSKHGRKDLDYLNWRWKPNECELQRFDA 346
           E+CDLF G+WIP+L G  YT+ SC TIP+SKNC +HGRKD D+L WRWKP++C+L RFD+
Sbjct: 74  ENCDLFKGQWIPDLKGSQYTNSSCTTIPNSKNCFRHGRKDADFLYWRWKPDKCDLPRFDS 133

Query: 347 KTFLRIVRGKTLAFIGDSVARNQMESLLCLLSQEQTPIDMYKDSEDQFRTWSFPSHKFTI 526
           K FL IVRGK LAFIGDSVARN MESLLCLLSQ + P+D YKD+ED+ R W FP+H FT+
Sbjct: 134 KAFLEIVRGKALAFIGDSVARNHMESLLCLLSQGEVPVDAYKDTEDRNRIWHFPNHDFTL 193

Query: 527 KVLWTKF 547
           K+LWTKF
Sbjct: 194 KILWTKF 200


>ref|XP_002324017.1| predicted protein [Populus trichocarpa] gi|222867019|gb|EEF04150.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  201 bits (512), Expect = 5e-50
 Identities = 90/147 (61%), Positives = 109/147 (74%)
 Frame = +2

Query: 107 FFIFHAPGSSKLNVEPKYGYESCDLFNGRWIPELNGPLYTSHSCLTIPDSKNCSKHGRKD 286
           F I H      L ++P    + CDLFNG W+P+  G +YT+ SC TIP SKNC ++GRKD
Sbjct: 50  FVIEHNIDQKLLLIKPHKEEDKCDLFNGNWVPDFEGSIYTNSSCATIPTSKNCFRNGRKD 109

Query: 287 LDYLNWRWKPNECELQRFDAKTFLRIVRGKTLAFIGDSVARNQMESLLCLLSQEQTPIDM 466
            D+LNWRWKP  C+L RFDA  +L IVRGKTLAFIGDSVARN +ESLLCLLSQ++ P+D 
Sbjct: 110 QDFLNWRWKPERCDLPRFDATAYLDIVRGKTLAFIGDSVARNHIESLLCLLSQKEVPVDA 169

Query: 467 YKDSEDQFRTWSFPSHKFTIKVLWTKF 547
           Y DSED+ R W FP H FT+K+LWTKF
Sbjct: 170 YLDSEDRNRIWHFPVHNFTLKMLWTKF 196


>emb|CBI34962.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  199 bits (507), Expect = 2e-49
 Identities = 86/134 (64%), Positives = 103/134 (76%)
 Frame = +2

Query: 146 VEPKYGYESCDLFNGRWIPELNGPLYTSHSCLTIPDSKNCSKHGRKDLDYLNWRWKPNEC 325
           ++P    E CDLF G W+P+  G  YT+ SC TIPDSKNC KHGRKD D++NWRWKP  C
Sbjct: 66  IKPHQSDERCDLFKGHWVPDEKGSPYTNWSCTTIPDSKNCFKHGRKDTDFVNWRWKPQGC 125

Query: 326 ELQRFDAKTFLRIVRGKTLAFIGDSVARNQMESLLCLLSQEQTPIDMYKDSEDQFRTWSF 505
            L RFD  TF R+ +GK LAF+GDSV+RN MESLLCLLSQE+ P D+YKDSED+FRTW F
Sbjct: 126 HLPRFDPATFFRLFQGKKLAFVGDSVSRNHMESLLCLLSQEEVPRDIYKDSEDRFRTWYF 185

Query: 506 PSHKFTIKVLWTKF 547
           P H FT+ +LW+KF
Sbjct: 186 PRHDFTLMILWSKF 199


>emb|CAN82134.1| hypothetical protein VITISV_002644 [Vitis vinifera]
          Length = 1961

 Score =  198 bits (504), Expect = 4e-49
 Identities = 86/129 (66%), Positives = 101/129 (78%)
 Frame = +2

Query: 161  GYESCDLFNGRWIPELNGPLYTSHSCLTIPDSKNCSKHGRKDLDYLNWRWKPNECELQRF 340
            G E CDLF G W+P+  G  YT+ SC TIPDSKNC KHGRKD D++NWRWKP  C L RF
Sbjct: 1613 GDERCDLFKGHWVPDEKGSPYTNWSCTTIPDSKNCFKHGRKDTDFVNWRWKPQGCHLPRF 1672

Query: 341  DAKTFLRIVRGKTLAFIGDSVARNQMESLLCLLSQEQTPIDMYKDSEDQFRTWSFPSHKF 520
            D  TF R+ +GK LAF+GDSV+RN MESLLCLLSQE+ P D+YKDSED+FRTW FP H F
Sbjct: 1673 DPATFFRLFQGKKLAFVGDSVSRNHMESLLCLLSQEEVPRDIYKDSEDRFRTWYFPRHDF 1732

Query: 521  TIKVLWTKF 547
            T+ +LW+KF
Sbjct: 1733 TLMILWSKF 1741


>ref|XP_002275185.1| PREDICTED: uncharacterized protein LOC100257711 [Vitis vinifera]
          Length = 419

 Score =  196 bits (499), Expect = 2e-48
 Identities = 85/134 (63%), Positives = 102/134 (76%)
 Frame = +2

Query: 146 VEPKYGYESCDLFNGRWIPELNGPLYTSHSCLTIPDSKNCSKHGRKDLDYLNWRWKPNEC 325
           ++P    E CDLF G W+P+  G  YT+ SC TIPDSKNC KHGRKD D++NWRWKP  C
Sbjct: 66  IKPHQSDERCDLFKGHWVPDEKGSPYTNWSCTTIPDSKNCFKHGRKDTDFVNWRWKPQGC 125

Query: 326 ELQRFDAKTFLRIVRGKTLAFIGDSVARNQMESLLCLLSQEQTPIDMYKDSEDQFRTWSF 505
            L RFD  TF R+ +GK LAF+GDSV+RN MESLLCLLSQ + P D+YKDSED+FRTW F
Sbjct: 126 HLPRFDPATFFRLFQGKKLAFVGDSVSRNHMESLLCLLSQVKVPRDIYKDSEDRFRTWYF 185

Query: 506 PSHKFTIKVLWTKF 547
           P H FT+ +LW+KF
Sbjct: 186 PRHDFTLMILWSKF 199


Top