BLASTX nr result

ID: Cimicifuga21_contig00025144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025144
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion chann...   139   8e-40
ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion chann...   139   8e-40
ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann...   135   1e-39
ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion chann...   136   1e-39
ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ...   137   1e-39

>ref|XP_004167598.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
           sativus]
          Length = 663

 Score =  139 bits (349), Expect(2) = 8e-40
 Identities = 64/69 (92%), Positives = 67/69 (97%)
 Frame = -3

Query: 466 PSAFTLVTLETTEAFGLEAQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLT 287
           PS+FTLVTLETTEAF LEA+DVKYVTQHFRYTFVN+KVKRSARYYSPGWRTWAAVAIQL 
Sbjct: 552 PSSFTLVTLETTEAFSLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLA 611

Query: 286 WRRYRHRLT 260
           WRRYRHRLT
Sbjct: 612 WRRYRHRLT 620



 Score = 50.1 bits (118), Expect(2) = 8e-40
 Identities = 28/43 (65%), Positives = 28/43 (65%)
 Frame = -2

Query: 176 LTSLSFIXXXXXXXXXXXLGEDRLRLYTALLTSPKPELDDFAF 48
           LTSLSFI           LGEDRLRLYTALLTSPKP  D F F
Sbjct: 621 LTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 663


>ref|XP_004149297.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Cucumis
           sativus]
          Length = 659

 Score =  139 bits (349), Expect(2) = 8e-40
 Identities = 64/69 (92%), Positives = 67/69 (97%)
 Frame = -3

Query: 466 PSAFTLVTLETTEAFGLEAQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLT 287
           PS+FTLVTLETTEAF LEA+DVKYVTQHFRYTFVN+KVKRSARYYSPGWRTWAAVAIQL 
Sbjct: 548 PSSFTLVTLETTEAFSLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLA 607

Query: 286 WRRYRHRLT 260
           WRRYRHRLT
Sbjct: 608 WRRYRHRLT 616



 Score = 50.1 bits (118), Expect(2) = 8e-40
 Identities = 28/43 (65%), Positives = 28/43 (65%)
 Frame = -2

Query: 176 LTSLSFIXXXXXXXXXXXLGEDRLRLYTALLTSPKPELDDFAF 48
           LTSLSFI           LGEDRLRLYTALLTSPKP  D F F
Sbjct: 617 LTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNHDHFDF 659


>ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 691

 Score =  135 bits (340), Expect(2) = 1e-39
 Identities = 62/69 (89%), Positives = 66/69 (95%)
 Frame = -3

Query: 466 PSAFTLVTLETTEAFGLEAQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLT 287
           PS+ TL+TLETTEAFGLEA+DVKYVTQHFRYTFV EKVKRSARYYSPGWRTWAAVAIQL 
Sbjct: 580 PSSSTLITLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLA 639

Query: 286 WRRYRHRLT 260
           WRRY+HRLT
Sbjct: 640 WRRYKHRLT 648



 Score = 53.1 bits (126), Expect(2) = 1e-39
 Identities = 28/43 (65%), Positives = 29/43 (67%)
 Frame = -2

Query: 176 LTSLSFIXXXXXXXXXXXLGEDRLRLYTALLTSPKPELDDFAF 48
           LTSLSFI           +GEDRLRLYTALLTSPKP  DDF F
Sbjct: 649 LTSLSFIRPRRPLSRSSSMGEDRLRLYTALLTSPKPNQDDFDF 691


>ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max]
          Length = 690

 Score =  136 bits (343), Expect(2) = 1e-39
 Identities = 63/69 (91%), Positives = 66/69 (95%)
 Frame = -3

Query: 466 PSAFTLVTLETTEAFGLEAQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLT 287
           PS+ TL+TLETTEAFGLEAQDVKYVTQHFRYTFV EKVKRSARYYSPGWRTWAAVAIQL 
Sbjct: 579 PSSSTLITLETTEAFGLEAQDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLA 638

Query: 286 WRRYRHRLT 260
           WRRY+HRLT
Sbjct: 639 WRRYKHRLT 647



 Score = 52.0 bits (123), Expect(2) = 1e-39
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = -2

Query: 176 LTSLSFIXXXXXXXXXXXLGEDRLRLYTALLTSPKPELDDFAF 48
           LTSLSFI           +GED+LRLYTALLTSPKP  DDF F
Sbjct: 648 LTSLSFIRPRRPLSRSSSIGEDKLRLYTALLTSPKPNQDDFDF 690


>ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 687

 Score =  137 bits (344), Expect(2) = 1e-39
 Identities = 63/69 (91%), Positives = 67/69 (97%)
 Frame = -3

Query: 466 PSAFTLVTLETTEAFGLEAQDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLT 287
           PS+ TLVTLETTEAFGLEA+DVKYVTQHFRYTFVNE+VKRSARYYSPGWRTWAAVAIQL 
Sbjct: 576 PSSCTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNERVKRSARYYSPGWRTWAAVAIQLA 635

Query: 286 WRRYRHRLT 260
           WRRY+HRLT
Sbjct: 636 WRRYKHRLT 644



 Score = 51.6 bits (122), Expect(2) = 1e-39
 Identities = 28/43 (65%), Positives = 29/43 (67%)
 Frame = -2

Query: 176 LTSLSFIXXXXXXXXXXXLGEDRLRLYTALLTSPKPELDDFAF 48
           LTSLSFI           LGEDRLRLYTALLTSPKP  +DF F
Sbjct: 645 LTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQEDFDF 687


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