BLASTX nr result

ID: Cimicifuga21_contig00025126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025126
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40996.3| unnamed protein product [Vitis vinifera]              154   5e-36
ref|XP_003635218.1| PREDICTED: TPR repeat-containing thioredoxin...   151   5e-35
ref|XP_002533142.1| Tetratricopeptide repeat protein, putative [...   150   1e-34
ref|XP_002306314.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_003532831.1| PREDICTED: TPR repeat-containing thioredoxin...   140   8e-32

>emb|CBI40996.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  154 bits (390), Expect = 5e-36
 Identities = 83/152 (54%), Positives = 110/152 (72%), Gaps = 7/152 (4%)
 Frame = +1

Query: 19  SKGSNALVRASSGNIILFSQLGNIKQPSLAK--SNSSKSHGTKYIVSTTNTNSVMGNIMR 192
           SKG+++LVRASS N++LFS LGN++QP      SN++     KY      ++S MGN+++
Sbjct: 158 SKGNSSLVRASSSNVMLFSNLGNLRQPGTGNFTSNNTSMPNGKY------SSSQMGNVVK 211

Query: 193 KTNDHEIRYQP-----KTLSKSSDPDTLKVMGNEEFKKGRFAEALALYDQAIAFNHNNAS 357
           K N  +   +P     + LS   DP+TLK+MGNE++K GRFAEALALYD AI+ + N AS
Sbjct: 212 KPNGEK---EPPSSLCRALSTRMDPETLKIMGNEDYKNGRFAEALALYDAAISIDPNKAS 268

Query: 358 YRSNKSAALVGLGRLLEAVFECREAIKIDPFY 453
           YRSNKSAAL  LGRLLEAVFECREA++I+P+Y
Sbjct: 269 YRSNKSAALTALGRLLEAVFECREALRIEPYY 300


>ref|XP_003635218.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Vitis
           vinifera]
          Length = 710

 Score =  151 bits (382), Expect = 5e-35
 Identities = 83/158 (52%), Positives = 112/158 (70%), Gaps = 13/158 (8%)
 Frame = +1

Query: 19  SKGSNALVRASSGNIILFSQLGNIKQPSLAK--SNSSKSHGTKYIVSTTN------TNSV 174
           SKG+++LVRASS N++LFS LGN++QP      SN+ + +  K     T+      ++S 
Sbjct: 155 SKGNSSLVRASSSNVMLFSNLGNLRQPGTGNFTSNNVQDYLPKAAREETSMPNGKYSSSQ 214

Query: 175 MGNIMRKTNDHEIRYQP-----KTLSKSSDPDTLKVMGNEEFKKGRFAEALALYDQAIAF 339
           MGN+++K N  +   +P     + LS   DP+TLK+MGNE++K GRFAEALALYD AI+ 
Sbjct: 215 MGNVVKKPNGEK---EPPSSLCRALSTRMDPETLKIMGNEDYKNGRFAEALALYDAAISI 271

Query: 340 NHNNASYRSNKSAALVGLGRLLEAVFECREAIKIDPFY 453
           + N ASYRSNKSAAL  LGRLLEAVFECREA++I+P+Y
Sbjct: 272 DPNKASYRSNKSAALTALGRLLEAVFECREALRIEPYY 309


>ref|XP_002533142.1| Tetratricopeptide repeat protein, putative [Ricinus communis]
           gi|223527053|gb|EEF29238.1| Tetratricopeptide repeat
           protein, putative [Ricinus communis]
          Length = 622

 Score =  150 bits (378), Expect = 1e-34
 Identities = 82/165 (49%), Positives = 107/165 (64%), Gaps = 19/165 (11%)
 Frame = +1

Query: 16  RSKGSNALVRASSGNIILFSQLGNIKQPSLAKSNSSKSHGT-KYIVSTTNT--------- 165
           ++ GSN LVRASS N++LF  LGN++QP      +  S+    ++  T            
Sbjct: 158 KNNGSNTLVRASSSNVMLFGNLGNLRQPGAGGGGNMSSYNVLDHLPKTAREENPVPNGKY 217

Query: 166 -NSVMGNIMRKTNDHE--IRYQP------KTLSKSSDPDTLKVMGNEEFKKGRFAEALAL 318
            NSVMGN+++K ++ +  +  QP      + LS   DP+ LK+MGNE++K G FAEALAL
Sbjct: 218 PNSVMGNVIKKQHEEKPGVEQQPAGGSLCRALSTRMDPEQLKIMGNEDYKNGNFAEALAL 277

Query: 319 YDQAIAFNHNNASYRSNKSAALVGLGRLLEAVFECREAIKIDPFY 453
           YD AI+ + N ASYRSNKSAAL  LGRLLEAVFECREAI+IDP Y
Sbjct: 278 YDAAISIDPNKASYRSNKSAALTALGRLLEAVFECREAIRIDPHY 322


>ref|XP_002306314.1| predicted protein [Populus trichocarpa] gi|222855763|gb|EEE93310.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score =  142 bits (358), Expect = 3e-32
 Identities = 78/154 (50%), Positives = 104/154 (67%), Gaps = 8/154 (5%)
 Frame = +1

Query: 16  RSKGSNALVRASSGNIILFSQLGNIKQPSLAKSNSSKSHGTKYIVSTTNTNSVMGNIMRK 195
           +SKGS+ LVRASS N++LF  LGN++Q     S + K             NSVMGN+++K
Sbjct: 139 KSKGSSTLVRASSSNVMLFGNLGNLRQGGEVVSPNGKY-----------PNSVMGNVVKK 187

Query: 196 TNDHE--IRYQP------KTLSKSSDPDTLKVMGNEEFKKGRFAEALALYDQAIAFNHNN 351
            N+ +  +  QP      + LS   DP+ LK+MGNE++K G FAEALALY+ AI+ + N 
Sbjct: 188 QNEEKPNVGAQPASGSLCRALSTRMDPEQLKMMGNEDYKNGNFAEALALYNAAISIDPNK 247

Query: 352 ASYRSNKSAALVGLGRLLEAVFECREAIKIDPFY 453
           ASYRSN+SAAL  LG++LEAVFECREAI+I+P Y
Sbjct: 248 ASYRSNRSAALTALGKILEAVFECREAIRIEPHY 281


>ref|XP_003532831.1| PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Glycine
           max]
          Length = 548

 Score =  140 bits (354), Expect = 8e-32
 Identities = 75/150 (50%), Positives = 102/150 (68%)
 Frame = +1

Query: 4   VFTDRSKGSNALVRASSGNIILFSQLGNIKQPSLAKSNSSKSHGTKYIVSTTNTNSVMGN 183
           + TDR KGS+ LVRASS N+++F+ LGN++Q       ++ ++    + +   TN  + N
Sbjct: 117 MITDRQKGSSNLVRASSSNVMMFNNLGNLRQ-----GGNTNTYSQNPVANGRYTNQTVEN 171

Query: 184 IMRKTNDHEIRYQPKTLSKSSDPDTLKVMGNEEFKKGRFAEALALYDQAIAFNHNNASYR 363
           +  K N  +     + +S   +P+ LK+MGNE++K GRF EALALYD AIA + N ASYR
Sbjct: 172 VS-KGNKEQPGSLCRVVSTRMNPEQLKIMGNEDYKNGRFQEALALYDAAIAIDPNKASYR 230

Query: 364 SNKSAALVGLGRLLEAVFECREAIKIDPFY 453
           SNKSAAL  LGRLLEAVFECREAI+I+P Y
Sbjct: 231 SNKSAALTALGRLLEAVFECREAIQIEPRY 260


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