BLASTX nr result

ID: Cimicifuga21_contig00025119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025119
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297648.1| predicted protein [Populus trichocarpa] gi|1...   145   4e-33
gb|ABK93789.1| unknown [Populus trichocarpa]                          142   3e-32
ref|XP_002304013.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002335799.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002336701.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31

>ref|XP_002297648.1| predicted protein [Populus trichocarpa] gi|118484908|gb|ABK94320.1|
           unknown [Populus trichocarpa]
           gi|222844906|gb|EEE82453.1| predicted protein [Populus
           trichocarpa]
          Length = 195

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/136 (53%), Positives = 99/136 (72%)
 Frame = +1

Query: 52  ILLRSALSLTILSIYISQHHIVAIEGKDQEFGRRLSPTKLGLRKEKLTHFRVYWQDIVSG 231
           IL    ++L +LS + +   I+    +D EF R L    LGL+KEKL+HF++YW DI++G
Sbjct: 7   ILASKFITLLLLSSFAT---ILVTGDQDHEFVRSLDRKLLGLKKEKLSHFKLYWHDILTG 63

Query: 232 PNPTARVIVKPPSNSSRPGFGTVAIFDDALTMDPALNSKLVGRAQGLFALSSQTEVAVLM 411
            NP+A  +V PPSN+SR  FG V + D+ LT+ P ++SKLVGRAQGL+A +SQ ++ +LM
Sbjct: 64  QNPSAVQVVPPPSNTSRTAFGLVRMIDNPLTLGPEMSSKLVGRAQGLYAQASQQDIGLLM 123

Query: 412 AMNFAFIEGKYNGSTI 459
           AMNFAFIEGKYNGSTI
Sbjct: 124 AMNFAFIEGKYNGSTI 139


>gb|ABK93789.1| unknown [Populus trichocarpa]
          Length = 194

 Score =  142 bits (358), Expect = 3e-32
 Identities = 76/140 (54%), Positives = 97/140 (69%), Gaps = 1/140 (0%)
 Frame = +1

Query: 43  MAKILLRSALSLTILSIYISQHHIVAIEGKDQEFGRRLSPTKLGLRKEKLTHFRVYWQDI 222
           MAKIL   A S  +LSI +S  +++    K Q F + LSP  LGL+KEKL+H   Y+ DI
Sbjct: 1   MAKILQNLASSFLVLSIVLS--YLIIANAKSQRFTKYLSPATLGLKKEKLSHLHFYFHDI 58

Query: 223 VSGPNPTA-RVIVKPPSNSSRPGFGTVAIFDDALTMDPALNSKLVGRAQGLFALSSQTEV 399
           VSG NPTA R+     +N+S  GFG VA+ DD LTM P L+SKLVGRAQG +A +SQ +V
Sbjct: 59  VSGKNPTAVRIARADMTNTSSTGFGMVAMIDDPLTMTPELSSKLVGRAQGFYASASQNDV 118

Query: 400 AVLMAMNFAFIEGKYNGSTI 459
            +LM MNF F+EGK+NGST+
Sbjct: 119 GLLMTMNFVFMEGKFNGSTL 138


>ref|XP_002304013.1| predicted protein [Populus trichocarpa] gi|222841445|gb|EEE78992.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/135 (51%), Positives = 94/135 (69%)
 Frame = +1

Query: 55  LLRSALSLTILSIYISQHHIVAIEGKDQEFGRRLSPTKLGLRKEKLTHFRVYWQDIVSGP 234
           ++   + LT+LS +++        G++Q+F R L     GL+KEKLTHFRVYW DI S P
Sbjct: 11  IVSHTILLTLLSSFVT--------GENQDFVRSLDRKLYGLKKEKLTHFRVYWHDIYSAP 62

Query: 235 NPTARVIVKPPSNSSRPGFGTVAIFDDALTMDPALNSKLVGRAQGLFALSSQTEVAVLMA 414
           NPTA  IV+ PSN+S   FG++++ DD LT  P L+SKL+GRAQG +  + Q E A+LMA
Sbjct: 63  NPTAMPIVRAPSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEEAALLMA 122

Query: 415 MNFAFIEGKYNGSTI 459
           MNF F++GKYNGSTI
Sbjct: 123 MNFVFLQGKYNGSTI 137


>ref|XP_002335799.1| predicted protein [Populus trichocarpa] gi|222834872|gb|EEE73321.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/135 (51%), Positives = 94/135 (69%)
 Frame = +1

Query: 55  LLRSALSLTILSIYISQHHIVAIEGKDQEFGRRLSPTKLGLRKEKLTHFRVYWQDIVSGP 234
           ++   + LT+LS +++        G++Q+F R L     GL+KEKLTHFRVYW DI S P
Sbjct: 11  IVSHTILLTLLSSFVT--------GENQDFVRSLDRKLYGLKKEKLTHFRVYWHDIYSAP 62

Query: 235 NPTARVIVKPPSNSSRPGFGTVAIFDDALTMDPALNSKLVGRAQGLFALSSQTEVAVLMA 414
           NPTA  IV+ PSN+S   FG++++ DD LT  P L+SKL+GRAQG +  + Q E A+LMA
Sbjct: 63  NPTAMPIVRAPSNTSATLFGSISMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETALLMA 122

Query: 415 MNFAFIEGKYNGSTI 459
           MNF F++GKYNGSTI
Sbjct: 123 MNFVFLQGKYNGSTI 137


>ref|XP_002336701.1| predicted protein [Populus trichocarpa] gi|222836553|gb|EEE74960.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/139 (52%), Positives = 92/139 (66%)
 Frame = +1

Query: 43  MAKILLRSALSLTILSIYISQHHIVAIEGKDQEFGRRLSPTKLGLRKEKLTHFRVYWQDI 222
           MA+I+      L ILS  +S   I+    ++Q F R L     G +KEKLTHFRVYW DI
Sbjct: 1   MARIVPIIVSKLIILSTILSPLAIIHASKENQGFVRSLDRKLYGFKKEKLTHFRVYWHDI 60

Query: 223 VSGPNPTARVIVKPPSNSSRPGFGTVAIFDDALTMDPALNSKLVGRAQGLFALSSQTEVA 402
            S PNPTA  IV  PSN+S   FG++++ DD LT  P L+SKL+GRAQG +  + Q E A
Sbjct: 61  YSAPNPTAIPIVTSPSNTSATLFGSLSMIDDPLTEKPELSSKLIGRAQGFYGSAGQEETA 120

Query: 403 VLMAMNFAFIEGKYNGSTI 459
           +LMAMNF F++GKYNGSTI
Sbjct: 121 LLMAMNFVFLQGKYNGSTI 139


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