BLASTX nr result

ID: Cimicifuga21_contig00025105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025105
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ52488.1| GA 20-oxidase [Paeonia suffruticosa]                   414   e-113
emb|CBI18950.3| unnamed protein product [Vitis vinifera]              401   e-110
ref|XP_002284681.1| PREDICTED: gibberellin 20 oxidase 2 [Vitis v...   401   e-110
ref|XP_002310523.1| gibberellin 20-oxidase [Populus trichocarpa]...   398   e-108
ref|XP_002527163.1| gibberellin 20-oxidase, putative [Ricinus co...   394   e-107

>gb|ABQ52488.1| GA 20-oxidase [Paeonia suffruticosa]
          Length = 381

 Score =  414 bits (1065), Expect = e-113
 Identities = 198/287 (68%), Positives = 235/287 (81%), Gaps = 4/287 (1%)
 Frame = +3

Query: 9   VSLLMDTSAPTLLLCPSTDLKHHRD---MVFDSSLLQKQTRIPREFIWPQRDLVHTVEG- 176
           +SLL+D+S  T L CP  +LK  R+   ++FDS  LQKQ  +P EF+WPQ DLV T E  
Sbjct: 1   MSLLLDSSTNTHLTCPPMELKGDRENGVLLFDS--LQKQANLPTEFVWPQGDLVRTQEEE 58

Query: 177 LSEPLVDLQGVLGGDQIETSKAAELIREACLKHGFFQAVNHGVDAQLISAAHDHMDAFFK 356
           L EPLVDL G   GD++ T+ AAELIR ACL HGFFQ +NHG+DA LISAAHD M+ FFK
Sbjct: 59  LKEPLVDLAGFYTGDELATTHAAELIRTACLNHGFFQVINHGIDANLISAAHDEMNVFFK 118

Query: 357 LPISQKLRVLKKPGSMWGYSGAHANRFSSKLPWKETLSFGYHDNDSNPIVQDYFTSSLGK 536
           LPIS+KL V +KPG +WGYSGAH++R++SKLPWKETLSFGY  + S+P+V DYF SSLGK
Sbjct: 119 LPISKKLSVRRKPGGVWGYSGAHSDRYTSKLPWKETLSFGYQGSASHPVVVDYFKSSLGK 178

Query: 537 EFEHTGLIYQRYCEAMKKLSLVIMELLAISLGVDRLHFRKFFEDSNSIVRCNYYPPCQEP 716
           +FEHTG +YQ YCEAMK+LSLVIMELLAISLGVDRL++RK+F+D +SI+RCNYYPPC EP
Sbjct: 179 DFEHTGWVYQSYCEAMKELSLVIMELLAISLGVDRLYYRKYFKDGSSIMRCNYYPPCNEP 238

Query: 717 SLTFGTGPHCDPTSLTILHQDQVGGLEVFTQNRWQAVQPRPDALVIN 857
            LT GTGPHCDPTS+TILHQDQVGGLEVF  N+WQ V+PRPDA VIN
Sbjct: 239 GLTLGTGPHCDPTSITILHQDQVGGLEVFANNKWQGVRPRPDAFVIN 285


>emb|CBI18950.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  401 bits (1031), Expect = e-110
 Identities = 189/282 (67%), Positives = 224/282 (79%), Gaps = 3/282 (1%)
 Frame = +3

Query: 21  MDTSAPTLLLCPS---TDLKHHRDMVFDSSLLQKQTRIPREFIWPQRDLVHTVEGLSEPL 191
           MD  A TLL CP    TD K H     DSS  +KQ  IP EFIW + ++ H  E L EP+
Sbjct: 1   MDLGASTLL-CPPLELTDKKEHGVSPSDSSFFKKQPNIPMEFIWAKGEVGHAHEELREPV 59

Query: 192 VDLQGVLGGDQIETSKAAELIREACLKHGFFQAVNHGVDAQLISAAHDHMDAFFKLPISQ 371
           VDL+G   GD++ T  AA L+R ACL HGFFQ +NH VD  LI+ AHDHM+AFFKLP S+
Sbjct: 60  VDLEGFFSGDEVATQHAAMLVRSACLNHGFFQVINHRVDPHLITVAHDHMEAFFKLPWSK 119

Query: 372 KLRVLKKPGSMWGYSGAHANRFSSKLPWKETLSFGYHDNDSNPIVQDYFTSSLGKEFEHT 551
           KLR  +KPGS+WGYSGAHA+RFS KLPWKETLSFG+H+N S  +V+D+F S+LG+EFE T
Sbjct: 120 KLRAQRKPGSLWGYSGAHADRFSLKLPWKETLSFGFHENGSESVVEDFFKSTLGEEFEQT 179

Query: 552 GLIYQRYCEAMKKLSLVIMELLAISLGVDRLHFRKFFEDSNSIVRCNYYPPCQEPSLTFG 731
           GL+YQ+YC+AMK LSLV+MELLAISLGVDRLH+RKFFED +SI+RCNYYPPCQEP L FG
Sbjct: 180 GLVYQKYCQAMKDLSLVLMELLAISLGVDRLHYRKFFEDGSSIMRCNYYPPCQEPGLAFG 239

Query: 732 TGPHCDPTSLTILHQDQVGGLEVFTQNRWQAVQPRPDALVIN 857
           TGPHCDPTSLTILHQDQVGGLEV+  N+W+ ++PR DALVIN
Sbjct: 240 TGPHCDPTSLTILHQDQVGGLEVYVNNKWRTIRPRCDALVIN 281


>ref|XP_002284681.1| PREDICTED: gibberellin 20 oxidase 2 [Vitis vinifera]
          Length = 378

 Score =  401 bits (1031), Expect = e-110
 Identities = 189/282 (67%), Positives = 224/282 (79%), Gaps = 3/282 (1%)
 Frame = +3

Query: 21  MDTSAPTLLLCPS---TDLKHHRDMVFDSSLLQKQTRIPREFIWPQRDLVHTVEGLSEPL 191
           MD  A TLL CP    TD K H     DSS  +KQ  IP EFIW + ++ H  E L EP+
Sbjct: 1   MDLGASTLL-CPPLELTDKKEHGVSPSDSSFFKKQPNIPMEFIWAKGEVGHAHEELREPV 59

Query: 192 VDLQGVLGGDQIETSKAAELIREACLKHGFFQAVNHGVDAQLISAAHDHMDAFFKLPISQ 371
           VDL+G   GD++ T  AA L+R ACL HGFFQ +NH VD  LI+ AHDHM+AFFKLP S+
Sbjct: 60  VDLEGFFSGDEVATQHAAMLVRSACLNHGFFQVINHRVDPHLITVAHDHMEAFFKLPWSK 119

Query: 372 KLRVLKKPGSMWGYSGAHANRFSSKLPWKETLSFGYHDNDSNPIVQDYFTSSLGKEFEHT 551
           KLR  +KPGS+WGYSGAHA+RFS KLPWKETLSFG+H+N S  +V+D+F S+LG+EFE T
Sbjct: 120 KLRAQRKPGSLWGYSGAHADRFSLKLPWKETLSFGFHENGSESVVEDFFKSTLGEEFEQT 179

Query: 552 GLIYQRYCEAMKKLSLVIMELLAISLGVDRLHFRKFFEDSNSIVRCNYYPPCQEPSLTFG 731
           GL+YQ+YC+AMK LSLV+MELLAISLGVDRLH+RKFFED +SI+RCNYYPPCQEP L FG
Sbjct: 180 GLVYQKYCQAMKDLSLVLMELLAISLGVDRLHYRKFFEDGSSIMRCNYYPPCQEPGLAFG 239

Query: 732 TGPHCDPTSLTILHQDQVGGLEVFTQNRWQAVQPRPDALVIN 857
           TGPHCDPTSLTILHQDQVGGLEV+  N+W+ ++PR DALVIN
Sbjct: 240 TGPHCDPTSLTILHQDQVGGLEVYVNNKWRTIRPRCDALVIN 281


>ref|XP_002310523.1| gibberellin 20-oxidase [Populus trichocarpa]
           gi|222853426|gb|EEE90973.1| gibberellin 20-oxidase
           [Populus trichocarpa]
          Length = 378

 Score =  398 bits (1022), Expect = e-108
 Identities = 186/282 (65%), Positives = 226/282 (80%), Gaps = 3/282 (1%)
 Frame = +3

Query: 21  MDTSAPTLLLCPSTDLKHHRD--MVFDSSLLQKQTRIPREFIWPQRDLVHTVEGLSEPLV 194
           MD+++ +LLLCP   L       +VFDSS LQKQ  +P EF+WP  DLVH  + L EP++
Sbjct: 1   MDSTSSSLLLCPPPYLTKDETGALVFDSSFLQKQASLPTEFMWPHGDLVHNEDELKEPMI 60

Query: 195 DLQGVLGGDQIETSKAAELIREACLKHGFFQAVNHGVDAQLISAAHDHMDAFFKLPISQK 374
           DL+G L GD++ T++AAEL+R ACL HGFFQ  NHGVD  LI +AH+ +   FKLP+ +K
Sbjct: 61  DLEGFLKGDEVATAQAAELVRTACLNHGFFQVTNHGVDISLIHSAHEEIGKIFKLPLDKK 120

Query: 375 LRVLKKPGSMWGYSGAHANRFSSKLPWKETLSFGYH-DNDSNPIVQDYFTSSLGKEFEHT 551
           L V +KPG + GYSGAHA+R+SSKLPWKET SFGYH D+DS P+V DYF S LGK+FEHT
Sbjct: 121 LSVRRKPGDVSGYSGAHAHRYSSKLPWKETFSFGYHGDDDSVPLVVDYFKSVLGKDFEHT 180

Query: 552 GLIYQRYCEAMKKLSLVIMELLAISLGVDRLHFRKFFEDSNSIVRCNYYPPCQEPSLTFG 731
           G +YQ YCEAMKK+SLVI ELLAISLGVDRLH+RKFFED +SI+RCNYYPPC   +LT G
Sbjct: 181 GWVYQSYCEAMKKVSLVIFELLAISLGVDRLHYRKFFEDGSSIMRCNYYPPCNNSTLTLG 240

Query: 732 TGPHCDPTSLTILHQDQVGGLEVFTQNRWQAVQPRPDALVIN 857
           TGPHCDPTSLTILHQDQVGGL+VF+ N+W A++PRPDALV+N
Sbjct: 241 TGPHCDPTSLTILHQDQVGGLQVFSNNKWLAIRPRPDALVVN 282


>ref|XP_002527163.1| gibberellin 20-oxidase, putative [Ricinus communis]
           gi|223533472|gb|EEF35218.1| gibberellin 20-oxidase,
           putative [Ricinus communis]
          Length = 387

 Score =  394 bits (1012), Expect = e-107
 Identities = 184/286 (64%), Positives = 222/286 (77%), Gaps = 6/286 (2%)
 Frame = +3

Query: 18  LMDTSAPTLLLCPSTDLKHHR------DMVFDSSLLQKQTRIPREFIWPQRDLVHTVEGL 179
           LM T+  TLLLCP  D K H+      + +FDSS LQKQ ++P EFIWP  DLV   + L
Sbjct: 6   LMKTTTSTLLLCPPMDTKDHKSATTGVNFLFDSSFLQKQPKLPTEFIWPNGDLVSNQDEL 65

Query: 180 SEPLVDLQGVLGGDQIETSKAAELIREACLKHGFFQAVNHGVDAQLISAAHDHMDAFFKL 359
            EPL+DL G+L GD++ET+ AAEL+R ACL HGFFQ  NHGVDA LI AAH+ +D  FKL
Sbjct: 66  KEPLIDLDGILKGDEVETAHAAELVRAACLNHGFFQVTNHGVDASLIRAAHEEVDTIFKL 125

Query: 360 PISQKLRVLKKPGSMWGYSGAHANRFSSKLPWKETLSFGYHDNDSNPIVQDYFTSSLGKE 539
           P+ +KL V + PGS++GYSGAHA+R+S KLPWKET +FGY  +DS PIV DYF   LG++
Sbjct: 126 PLDKKLSVRRMPGSVYGYSGAHADRYSFKLPWKETFTFGYSRSDSEPIVVDYFKHVLGED 185

Query: 540 FEHTGLIYQRYCEAMKKLSLVIMELLAISLGVDRLHFRKFFEDSNSIVRCNYYPPCQEPS 719
           +E TG IYQ++CE MKKLS VI ELLAISLGVDR H+RK+FED +SI+RCNYYP C   S
Sbjct: 186 YERTGGIYQKFCEEMKKLSFVIFELLAISLGVDRFHYRKYFEDGSSIMRCNYYPACNNSS 245

Query: 720 LTFGTGPHCDPTSLTILHQDQVGGLEVFTQNRWQAVQPRPDALVIN 857
           LT GTGPHCDPTSLTILHQD+VGGLEVF  ++WQA++PRPDA VIN
Sbjct: 246 LTLGTGPHCDPTSLTILHQDEVGGLEVFANSKWQAIRPRPDAFVIN 291


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