BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025091
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group] g...    94   9e-18
ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [S...    94   9e-18

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/139 (52%), Positives = 102/139 (73%)
 Frame = -2

Query: 418 SVMNTLVNLYSKLWHPQRALGLSSFIPEAEFMWSSVIEACVRIKDHKTNFKLLPKIQRSY 239
           SV+NTL+NLYS+LW  ++AL L S IP++E  W+ +I AC+  +D++   KLL +IQ S+
Sbjct: 500 SVVNTLINLYSELWQHKQALKLCSMIPDSEISWNFLIRACLGAEDYEIIHKLLWRIQVSH 559

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
           G LD  S C + +SC++ VLLNVGTQ  AY+TKRGLIS    +NSLI+MYS CG   +AV
Sbjct: 560 GNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAV 619

Query: 58  AAFQSIPEKNSDSWTAVIS 2
            AF  +PEK++ SWT+++S
Sbjct: 620 QAFNLMPEKDTCSWTSILS 638



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
 Frame = -2

Query: 415 VMNTLVNLYSKLWHPQRALGLSSFIPEAEFM-WSSVIEACVRIKDHKTNFKLLPKIQRSY 239
           V N LV++Y      + A  +   I + + + WSS++   V+    +   ++   +    
Sbjct: 158 VENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGG 217

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
            + D+ +   +L +C N    + GTQ   Y+ K G  S     NSL+  Y++CG+L    
Sbjct: 218 IEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMR 277

Query: 58  AAFQSIPEKNSDSWTAVIS 2
             F  + EKN  SW   I+
Sbjct: 278 RVFSHMSEKNLVSWNTFIN 296


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/139 (52%), Positives = 102/139 (73%)
 Frame = -2

Query: 418 SVMNTLVNLYSKLWHPQRALGLSSFIPEAEFMWSSVIEACVRIKDHKTNFKLLPKIQRSY 239
           SV+NTL+NLYS+LW  ++AL L S IP++E  W+ +I AC+  +D++   KLL +IQ S+
Sbjct: 476 SVVNTLINLYSELWQHKQALKLCSMIPDSEISWNFLIRACLGAEDYEIIHKLLWRIQVSH 535

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
           G LD  S C + +SC++ VLLNVGTQ  AY+TKRGLIS    +NSLI+MYS CG   +AV
Sbjct: 536 GNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAV 595

Query: 58  AAFQSIPEKNSDSWTAVIS 2
            AF  +PEK++ SWT+++S
Sbjct: 596 QAFNLMPEKDTCSWTSILS 614



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
 Frame = -2

Query: 415 VMNTLVNLYSKLWHPQRALGLSSFIPEAEFM-WSSVIEACVRIKDHKTNFKLLPKIQRSY 239
           V N LV++Y      + A  +   I + + + WSS++   V+    +   ++   +    
Sbjct: 99  VENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGG 158

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
            + D+ +   +L +C N    + GTQ   Y+ K G  S     NSL+  Y++CG+L    
Sbjct: 159 IEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMR 218

Query: 58  AAFQSIPEKNSDSWTAVIS 2
             F  + EKN  SW   I+
Sbjct: 219 RVFSHMSEKNLVSWNTFIN 237


>ref|XP_003575063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 789

 Score =  100 bits (248), Expect = 2e-19
 Identities = 54/138 (39%), Positives = 78/138 (56%)
 Frame = -2

Query: 418 SVMNTLVNLYSKLWHPQRALGLSSFIPEAEFMWSSVIEACVRIKDHKTNFKLLPKIQRSY 239
           SV+ +L++ Y +     +AL L   +   E  W ++++   +  DH     L   IQRS 
Sbjct: 521 SVVKSLISFYLREGQFHQALKLCLSLSNREISWDTLVKEFSQAGDHIGVLNLFHVIQRSG 580

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
           G LD  + CH+L+SC    LL  G Q  AYLTKRGL S    ++ LI MYS+CG + DA 
Sbjct: 581 GVLDYPTACHILTSCGKLKLLCEGLQAHAYLTKRGLASKPCISSHLIDMYSKCGTVKDAF 640

Query: 58  AAFQSIPEKNSDSWTAVI 5
            AF+ + +KN+  WT+VI
Sbjct: 641 DAFRYMSDKNASCWTSVI 658



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/79 (35%), Positives = 42/79 (53%)
 Frame = -2

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
           GK D   V   L SCA+ + L  G  + AY+ K  + SD    +SL+ MY++CG L ++ 
Sbjct: 380 GKFDQFIVASSLRSCASDLDLAAGRMLHAYILKLNMNSDAFVTSSLVDMYAKCGCLEESH 439

Query: 58  AAFQSIPEKNSDSWTAVIS 2
             F +     +  W+AVIS
Sbjct: 440 LLFSTTKYPGTAEWSAVIS 458


>ref|NP_001047017.1| Os02g0529900 [Oryza sativa Japonica Group]
           gi|49388326|dbj|BAD25438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113536548|dbj|BAF08931.1| Os02g0529900 [Oryza
           sativa Japonica Group] gi|125582364|gb|EAZ23295.1|
           hypothetical protein OsJ_06992 [Oryza sativa Japonica
           Group] gi|215696993|dbj|BAG90987.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 53/138 (38%), Positives = 74/138 (53%)
 Frame = -2

Query: 418 SVMNTLVNLYSKLWHPQRALGLSSFIPEAEFMWSSVIEACVRIKDHKTNFKLLPKIQRSY 239
           SV+ +L++ Y +     +AL L   +  +E  W ++ +    + DH     L   IQRS 
Sbjct: 519 SVLRSLISFYLREGQFNQALRLCLSLSNSEISWGTLFQEFAELGDHLGILNLFHVIQRSG 578

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
           G LD  + C +LSSC     L  G Q  AYL KRGL S     + LI MYS CG+LT A 
Sbjct: 579 GVLDYPTACLILSSCGKKAHLPEGLQAHAYLMKRGLSSTGCMCDYLIDMYSGCGSLTHAF 638

Query: 58  AAFQSIPEKNSDSWTAVI 5
            AF++   +NS SWT++I
Sbjct: 639 EAFRNTSGRNSSSWTSII 656


>ref|XP_002453928.1| hypothetical protein SORBIDRAFT_04g021580 [Sorghum bicolor]
           gi|241933759|gb|EES06904.1| hypothetical protein
           SORBIDRAFT_04g021580 [Sorghum bicolor]
          Length = 798

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/139 (35%), Positives = 76/139 (54%)
 Frame = -2

Query: 418 SVMNTLVNLYSKLWHPQRALGLSSFIPEAEFMWSSVIEACVRIKDHKTNFKLLPKIQRSY 239
           SV+ +L+  Y +     +AL L   +   +  W +++E+  ++  H     L   IQR  
Sbjct: 531 SVLKSLITFYLRQGRYHQALKLCLALSNHDISWDTLVESFSQVDHHVGIVNLFHVIQRCG 590

Query: 238 GKLDSTSVCHLLSSCANSVLLNVGTQVQAYLTKRGLISDTLTNNSLIKMYSECGNLTDAV 59
             LD  +   +LSSC    LL  G Q  AY+TKRGL S   TN+ LI MYS CG+L  A 
Sbjct: 591 ANLDYHTARLILSSCGKLGLLEEGLQAHAYMTKRGLASTACTNSYLIDMYSSCGSLRHAF 650

Query: 58  AAFQSIPEKNSDSWTAVIS 2
            AF  +P+K++ SWT++++
Sbjct: 651 DAFNYMPDKDASSWTSIVA 669