BLASTX nr result

ID: Cimicifuga21_contig00025085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025085
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...    72   7e-11
ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containin...    72   7e-11
ref|XP_002533810.1| nuclear receptor binding set domain containi...    72   1e-10
ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containin...    71   2e-10
ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815...    70   5e-10

>ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
            protein 19-like [Cucumis sativus]
          Length = 1475

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = -3

Query: 606  LWNYKDPSGKIQGPFSLK*LSIWCSSGNFPLDLRIWRVGKDQESSYLLIDTIVG 445
            +W+Y+DPSGK+QGPFS+  L  W ++G FP DLRIWR+   QE S LL D + G
Sbjct: 894  IWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAG 947


>ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
            [Cucumis sativus]
          Length = 1470

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = -3

Query: 606  LWNYKDPSGKIQGPFSLK*LSIWCSSGNFPLDLRIWRVGKDQESSYLLIDTIVG 445
            +W+Y+DPSGK+QGPFS+  L  W ++G FP DLRIWR+   QE S LL D + G
Sbjct: 894  IWHYQDPSGKVQGPFSMVQLRKWSNTGYFPTDLRIWRISDQQEDSLLLTDVLAG 947


>ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
            putative [Ricinus communis] gi|223526264|gb|EEF28579.1|
            nuclear receptor binding set domain containing protein 1,
            nsd, putative [Ricinus communis]
          Length = 1586

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = -3

Query: 606  LWNYKDPSGKIQGPFSLK*LSIWCSSGNFPLDLRIWRVGKDQESSYLLIDTIVG 445
            LW+Y+DP GK+QGPF++  L  W +SG FP DLR+WR+ K Q+ S LL D +VG
Sbjct: 839  LWHYQDPFGKVQGPFAMMQLRKWSTSGLFPPDLRVWRIDKKQDDSILLTDALVG 892


>ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
           [Glycine max]
          Length = 1953

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 32/53 (60%), Positives = 41/53 (77%)
 Frame = -3

Query: 603 WNYKDPSGKIQGPFSLK*LSIWCSSGNFPLDLRIWRVGKDQESSYLLIDTIVG 445
           W+Y+DP+GKIQGPFS+  L  W +SG FP DLRIWRVG+ Q++S LL D + G
Sbjct: 748 WHYQDPTGKIQGPFSMLQLYKWNASGCFPPDLRIWRVGEKQDNSILLTDALSG 800



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 29/53 (54%), Positives = 37/53 (69%)
 Frame = -3

Query: 603  WNYKDPSGKIQGPFSLK*LSIWCSSGNFPLDLRIWRVGKDQESSYLLIDTIVG 445
            W+Y+DP+GK+QGPFSL  L  W + G FP DLRIWRV + Q +S  L D + G
Sbjct: 1562 WHYQDPTGKVQGPFSLLQLYKWNACGYFPSDLRIWRVDETQNNSIFLTDVLNG 1614


>ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
          Length = 1421

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 29/54 (53%), Positives = 39/54 (72%)
 Frame = -3

Query: 606  LWNYKDPSGKIQGPFSLK*LSIWCSSGNFPLDLRIWRVGKDQESSYLLIDTIVG 445
            +W+Y+DPSGK+QGPFS+  L  W ++G FP DLRIWR  + Q+ S LL D + G
Sbjct: 869  MWHYQDPSGKVQGPFSMVQLHKWSNTGYFPADLRIWRTTEKQDDSILLTDALAG 922


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