BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025084
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    89   6e-16
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    89   1e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    86   8e-15
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    85   1e-14
ref|XP_002305539.1| f-box family protein [Populus trichocarpa] g...    78   1e-12

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 8/194 (4%)
 Frame = -1

Query: 642 MLEFYIYKAVMSSTCPTTG---VVMVIQGFSRKLALCKPGKDNKWISVRGDKEGKFNDIT 472
           M + +I K ++SS+ P  G   + +VI   +  LALC+   D+ W  +  D +    D+ 
Sbjct: 157 MRDSFIKKTILSSS-PANGSDFIAVVILNQTGDLALCRKS-DDSWTFLE-DAQSYAEDVI 213

Query: 471 YSQGQFLAVRDNGEVYVVCGLDTSFPFTKLIMSKPDYSMYYKTYLVESRGELMLLIRVRN 292
           + +G F AV   G +  VC +  S P   +I     +    + YLVES  EL+L+ R  +
Sbjct: 214 FHRGLFYAVNKYGSI-AVCDVSGSSPRVSIIEMPQQFGGDLQ-YLVESGEELLLVTRYLD 271

Query: 291 -----ETGPTSESRLTQGFEIKKIDFSRPMWVEEFDIDKDCALFVGINDAFSLSISDVPG 127
                E   TS    T  F++ ++D   P W E      D ALF+G N + SLS  D PG
Sbjct: 272 LTYDVEPDQTSLIYRTTRFQVCRLDLKAPRW-EVVSSLGDRALFLGENLSLSLSSVDFPG 330

Query: 126 CKGNCIYFTDDCLE 85
           CKGNCIY+TDD  E
Sbjct: 331 CKGNCIYYTDDYSE 344


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 8/194 (4%)
 Frame = -1

Query: 642 MLEFYIYKAVMSSTCPTTG---VVMVIQGFSRKLALCKPGKDNKWISVRGDKEGKFNDIT 472
           M + +I K ++SS+ P  G   + +VI   +  LALC+   D+ W  +  D +    D+ 
Sbjct: 157 MRDSFIKKTILSSS-PANGSDFIAVVILNQTGDLALCRKS-DDSWTFLE-DAQSYSEDVI 213

Query: 471 YSQGQFLAVRDNGEVYVVCGLDTSFPFTKLIMSKPDYSMYYKTYLVESRGELMLLIRVRN 292
           + +G F AV   G +  VC +  S P   +I     +    + YLVES  EL+L+ R  +
Sbjct: 214 FHRGLFYAVNKYGSI-AVCDVSGSSPRVSIIEMPQQFGGDLQ-YLVESGEELLLVTRYLD 271

Query: 291 -----ETGPTSESRLTQGFEIKKIDFSRPMWVEEFDIDKDCALFVGINDAFSLSISDVPG 127
                E   TS    T  F++ ++D   P W E      D ALF+G N + SLS  D PG
Sbjct: 272 LTYDVEXDQTSLIYRTTRFQVCRLDSKAPRW-EVVSSLGDRALFLGENLSLSLSSVDFPG 330

Query: 126 CKGNCIYFTDDCLE 85
           CKGNCIY+TDD  E
Sbjct: 331 CKGNCIYYTDDYSE 344


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 73/223 (32%), Positives = 104/223 (46%), Gaps = 9/223 (4%)
 Frame = -1

Query: 642 MLEFYIYKAVMSSTC--PTTGVVMVIQGFSRKLALCKPGKDNKWISVRGDKEGKFNDITY 469
           M + +I K V+SS+       VV+ I   +  LA C+ G D  W  V   +     D+ +
Sbjct: 160 MRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNG-DKSWSLVENARSF-CEDVIF 217

Query: 468 SQGQFLAVRDNGEVYVVCGLDTSFPFTKLIMSKPDYSMYYKTYLVESRGELMLLIRVRNE 289
             G F AV   G++ V+C + +  P     M  P  +     YLV S  EL+L+ R  + 
Sbjct: 218 VNGMFYAVNKAGQI-VICDISSDSPRVSF-METPRQAGGDMQYLVNSGDELLLVTRYLDL 275

Query: 288 T----GPTSESRL---TQGFEIKKIDFSRPMWVEEFDIDKDCALFVGINDAFSLSISDVP 130
                 P  E  L   T  FE+ ++D++ P W+    +  D ALF+G N + SLS +D  
Sbjct: 276 EYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLG-DKALFIGENSSLSLSATDFS 334

Query: 129 GCKGNCIYFTDDCLEKFMFVDDCPNNYVVDMFVYDPFGGHDLG 1
           GC GNCIY+TDD L+          NY         FG HDLG
Sbjct: 335 GCMGNCIYYTDDYLDA---------NY------DGHFGDHDLG 362


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 8/212 (3%)
 Frame = -1

Query: 636  EFYIYKAVMSS--TCPTTGVVMVIQGFSRKLALCKPGKDNKWISVRGDKEGKFNDITYSQ 463
            + +IYKAV+SS  + P   V+++   + R LA  KPG    W  +  +  G  +DI Y  
Sbjct: 1060 DIFIYKAVLSSAPSSPDCAVMIIYSDYGR-LAFTKPGHQT-WTLLESES-GPVDDIIYFN 1116

Query: 462  GQFLAVRDNGEVYVVCGLDTSFPFTKLIMSKP-----DYSMYYKTYLVESRGELMLLIRV 298
            G FLAV  + EV++ C +  S   T    + P     D   Y   YLVES GE+ ++ R 
Sbjct: 1117 GSFLAVNLSWEVWI-CDISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRN 1175

Query: 297  RNETGPTSESRL-TQGFEIKKIDFSRPMWVEEFDIDKDCALFVGINDAFSLSISDVPGCK 121
              +T       + T  F + K+D     W E  ++D  C+ F+G N +FS   SD P  +
Sbjct: 1176 LYDTARRDIPYMRTWTFSVLKLDMCNKRWEEVENLDH-CSFFLGNNHSFSTWASDYPEFR 1234

Query: 120  GNCIYFTDDCLEKFMFVDDCPNNYVVDMFVYD 25
             N IYFTDD    +    + P N+  DM +Y+
Sbjct: 1235 KNSIYFTDD----YCGFLNIPRNF--DMGIYN 1260


>ref|XP_002305539.1| f-box family protein [Populus trichocarpa]
           gi|222848503|gb|EEE86050.1| f-box family protein
           [Populus trichocarpa]
          Length = 469

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 61/193 (31%), Positives = 98/193 (50%), Gaps = 14/193 (7%)
 Frame = -1

Query: 630 YIYKAVMSSTCPTTGVVMVIQGFSRKLALCKPGKDNKWISVRGDKEGKFNDITYSQGQFL 451
           Y+ K VM      T  V++    S KLA+ K G D +W ++  +    F+D+   +G+F 
Sbjct: 159 YMEKVVMIWLNSLTEFVLLTIHVSGKLAIFKSG-DKRW-TIINEMPSPFDDVIVYKGRFY 216

Query: 450 AVRDNGEVYVVCGLDTSFPFTKLIMSKPDYSMYYKTYLVESRGELMLL---IRVRNETGP 280
           AV + G   VV  +DT+       +   D     K YLVES+G+L+L+   + + ++ G 
Sbjct: 217 AVDNTGRTVVVA-MDTNLGLVGNPVFGGD-----KKYLVESKGDLLLVDMYLSIDSDEGL 270

Query: 279 TSE-----------SRLTQGFEIKKIDFSRPMWVEEFDIDKDCALFVGINDAFSLSISDV 133
           +             S  T  F++ K++     W+E  D++ D  LF+G +  FS S S++
Sbjct: 271 SIGHDVVQDLVQYMSERTVWFKVFKLNEEGKCWIEVNDLE-DRVLFLGDDLTFSASASEL 329

Query: 132 PGCKGNCIYFTDD 94
            GCKGNCI+F DD
Sbjct: 330 SGCKGNCIFFNDD 342