BLASTX nr result

ID: Cimicifuga21_contig00025070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025070
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608251.1| Protein AUXIN SIGNALING F-BOX [Medicago trun...   189   2e-46
ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   184   5e-45
emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]   184   5e-45
ref|XP_002316664.1| f-box family protein [Populus trichocarpa] g...   184   6e-45
ref|XP_003528427.1| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   183   1e-44

>ref|XP_003608251.1| Protein AUXIN SIGNALING F-BOX [Medicago truncatula]
           gi|355509306|gb|AES90448.1| Protein AUXIN SIGNALING
           F-BOX [Medicago truncatula]
          Length = 586

 Score =  189 bits (480), Expect = 2e-46
 Identities = 95/136 (69%), Positives = 110/136 (80%)
 Frame = -3

Query: 409 LRLKRMTISDGSLEFLAQSFPNFKALSLVSCEGFSTDGLATIATHCKNLTELDIQENDID 230
           LRLKRM +SD SLEFLA SFPNFKALSL+SC+GFSTDGLA +AT+CKNLTELDIQEN +D
Sbjct: 125 LRLKRMAVSDESLEFLAFSFPNFKALSLLSCDGFSTDGLAAVATNCKNLTELDIQENGVD 184

Query: 229 DTGGSWLSSFPESFTSLEVLNFTNMPSEVNFNSLARLVARCXXXXXXXXXXXXXLEQLQI 50
           D  G+WLS FPESFTSLE+LNF N+ ++VNF++L +LVARC             LEQLQ 
Sbjct: 185 DKSGNWLSCFPESFTSLEILNFANLSNDVNFDALEKLVARCNSLKTLKVNKSVTLEQLQR 244

Query: 49  LLVQAPQLAELGTGSF 2
           LLV+APQL ELGTGSF
Sbjct: 245 LLVRAPQLCELGTGSF 260


>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/136 (69%), Positives = 108/136 (79%)
 Frame = -3

Query: 409 LRLKRMTISDGSLEFLAQSFPNFKALSLVSCEGFSTDGLATIATHCKNLTELDIQENDID 230
           LRLKRMT++D SLEFLA +F NFKALSL+SC+GFSTDGLA IATHCKN+TELDIQEN ID
Sbjct: 122 LRLKRMTVTDESLEFLATTFTNFKALSLLSCDGFSTDGLAAIATHCKNMTELDIQENGID 181

Query: 229 DTGGSWLSSFPESFTSLEVLNFTNMPSEVNFNSLARLVARCXXXXXXXXXXXXXLEQLQI 50
           D GG WLS FPE+FTSLEVLNF N+ S+V+F++L +LV+RC             LEQLQ 
Sbjct: 182 DLGGGWLSCFPENFTSLEVLNFANLSSDVSFDALEKLVSRCRSLKFLKVNKNITLEQLQR 241

Query: 49  LLVQAPQLAELGTGSF 2
           LL  APQL ELGTGSF
Sbjct: 242 LLECAPQLTELGTGSF 257


>emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]
          Length = 620

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/136 (69%), Positives = 108/136 (79%)
 Frame = -3

Query: 409 LRLKRMTISDGSLEFLAQSFPNFKALSLVSCEGFSTDGLATIATHCKNLTELDIQENDID 230
           LRLKRMT++D SLEFLA +F NFKALSL+SC+GFSTDGLA IATHCKN+TELDIQEN ID
Sbjct: 122 LRLKRMTVTDESLEFLATTFTNFKALSLLSCDGFSTDGLAAIATHCKNMTELDIQENGID 181

Query: 229 DTGGSWLSSFPESFTSLEVLNFTNMPSEVNFNSLARLVARCXXXXXXXXXXXXXLEQLQI 50
           D GG WLS FPE+FTSLEVLNF N+ S+V+F++L +LV+RC             LEQLQ 
Sbjct: 182 DLGGGWLSCFPENFTSLEVLNFANLSSDVSFDALEKLVSRCRSLKFLKVNKNITLEQLQR 241

Query: 49  LLVQAPQLAELGTGSF 2
           LL  APQL ELGTGSF
Sbjct: 242 LLECAPQLTELGTGSF 257


>ref|XP_002316664.1| f-box family protein [Populus trichocarpa]
           gi|222859729|gb|EEE97276.1| f-box family protein
           [Populus trichocarpa]
          Length = 579

 Score =  184 bits (467), Expect = 6e-45
 Identities = 93/136 (68%), Positives = 107/136 (78%)
 Frame = -3

Query: 409 LRLKRMTISDGSLEFLAQSFPNFKALSLVSCEGFSTDGLATIATHCKNLTELDIQENDID 230
           LRLKRM +SD SLEFLA +FPNFK LSL+SC+GFSTDGLA IATHCKNLT+LD+QEN ID
Sbjct: 115 LRLKRMAVSDESLEFLALNFPNFKVLSLLSCDGFSTDGLAAIATHCKNLTQLDVQENGID 174

Query: 229 DTGGSWLSSFPESFTSLEVLNFTNMPSEVNFNSLARLVARCXXXXXXXXXXXXXLEQLQI 50
           D  G+WLS FPE+FTSLEVLNF N+ ++VNF++L RLV+RC             LE LQ 
Sbjct: 175 DKSGNWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKANKSISLEHLQR 234

Query: 49  LLVQAPQLAELGTGSF 2
           LLV APQL ELGTGSF
Sbjct: 235 LLVCAPQLTELGTGSF 250


>ref|XP_003528427.1| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like [Glycine
           max]
          Length = 578

 Score =  183 bits (465), Expect = 1e-44
 Identities = 92/136 (67%), Positives = 109/136 (80%)
 Frame = -3

Query: 409 LRLKRMTISDGSLEFLAQSFPNFKALSLVSCEGFSTDGLATIATHCKNLTELDIQENDID 230
           LRLKRMT++D SLEFLA  FPNFKALSL+SC+GFSTDGLA+IAT+CKNLTELDIQEN I+
Sbjct: 117 LRLKRMTVTDESLEFLALKFPNFKALSLLSCDGFSTDGLASIATNCKNLTELDIQENGIE 176

Query: 229 DTGGSWLSSFPESFTSLEVLNFTNMPSEVNFNSLARLVARCXXXXXXXXXXXXXLEQLQI 50
           D  G+WLS FP+SFTSLEVLNF N+ ++VNF++L +LV+RC             LEQLQ 
Sbjct: 177 DKSGNWLSCFPDSFTSLEVLNFANLHNDVNFDALEKLVSRCKSLKTLKVNKSVTLEQLQR 236

Query: 49  LLVQAPQLAELGTGSF 2
           L+V  PQL ELGTGSF
Sbjct: 237 LIVHVPQLGELGTGSF 252


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