BLASTX nr result

ID: Cimicifuga21_contig00025066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025066
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267174.1| PREDICTED: digestive organ expansion factor ...    75   4e-12
emb|CAN61704.1| hypothetical protein VITISV_025877 [Vitis vinifera]    61   1e-07
ref|XP_002892963.1| hypothetical protein ARALYDRAFT_471979 [Arab...    59   5e-07
gb|AAF99813.1|AC034257_5 Hypothetical protein [Arabidopsis thali...    58   7e-07
ref|NP_564032.1| uncharacterized protein [Arabidopsis thaliana] ...    58   7e-07

>ref|XP_002267174.1| PREDICTED: digestive organ expansion factor homolog [Vitis
           vinifera] gi|296090307|emb|CBI40126.3| unnamed protein
           product [Vitis vinifera]
          Length = 753

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
 Frame = +3

Query: 45  MAKGFGGNRGV--LKRHKTPDKVNHTNKRSRKNRKAEAKVARSPTPTS-GDSSEEDLPST 215
           M K FG  RG   LK   TP K + T+KR R  R+ E KVA SP+P+S G+SS+E   S+
Sbjct: 1   MGKRFGRKRGARGLKGTNTPAKYD-TSKRVR--RRTEEKVASSPSPSSSGESSDEQ--SS 55

Query: 216 NGAPEEVMVYKEPSMYDNLLTTLGSSNKTLAN 311
             A EE +VYKEPSMYDNLL TLG+ +++LAN
Sbjct: 56  GVASEEEVVYKEPSMYDNLLFTLGTGSESLAN 87


>emb|CAN61704.1| hypothetical protein VITISV_025877 [Vitis vinifera]
          Length = 598

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 18/91 (19%)
 Frame = +3

Query: 93  TPDKVNHTNKRSRKNRKAEAKVARSPTPTS------------------GDSSEEDLPSTN 218
           TP K + T+KR R  R+ E KVA SP+P+S                  G+SS+E   S+ 
Sbjct: 416 TPAKYD-TSKRVR--RRTEEKVASSPSPSSSGMITLLLYILLKNGVSLGESSDEQ--SSG 470

Query: 219 GAPEEVMVYKEPSMYDNLLTTLGSSNKTLAN 311
            A EE +VYKEPSMYDNLL TLG+ +++LAN
Sbjct: 471 VASEEEVVYKEPSMYDNLLFTLGTGSESLAN 501


>ref|XP_002892963.1| hypothetical protein ARALYDRAFT_471979 [Arabidopsis lyrata subsp.
           lyrata] gi|297338805|gb|EFH69222.1| hypothetical protein
           ARALYDRAFT_471979 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/80 (38%), Positives = 50/80 (62%)
 Frame = +3

Query: 72  GVLKRHKTPDKVNHTNKRSRKNRKAEAKVARSPTPTSGDSSEEDLPSTNGAPEEVMVYKE 251
           GV+KRH++ +K +   + ++K++  E  V  +P+    DS EED   T     E M+Y+E
Sbjct: 7   GVMKRHRSHEKFDK-KRDTKKHKHVEKAVVSNPSIEDPDSPEEDSIETES---EAMLYRE 62

Query: 252 PSMYDNLLTTLGSSNKTLAN 311
           P+ Y +LL +LGSSNK +A+
Sbjct: 63  PTQYQHLLASLGSSNKVVAD 82


>gb|AAF99813.1|AC034257_5 Hypothetical protein [Arabidopsis thaliana]
          Length = 699

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/80 (42%), Positives = 51/80 (63%)
 Frame = +3

Query: 72  GVLKRHKTPDKVNHTNKRSRKNRKAEAKVARSPTPTSGDSSEEDLPSTNGAPEEVMVYKE 251
           GVLKRH++ +K +   + ++K++  E  +  +P   S DS EE   S+  A  E MVY+E
Sbjct: 7   GVLKRHRSHEKFDK-KRDTKKHKHVEKTIVSNP---STDSPEE---SSIEAESEAMVYRE 59

Query: 252 PSMYDNLLTTLGSSNKTLAN 311
           P+ Y NLL +LGSSNK +A+
Sbjct: 60  PTQYQNLLVSLGSSNKVVAD 79


>ref|NP_564032.1| uncharacterized protein [Arabidopsis thaliana]
           gi|23297505|gb|AAN12983.1| unknown protein [Arabidopsis
           thaliana] gi|332191501|gb|AEE29622.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 754

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/80 (42%), Positives = 51/80 (63%)
 Frame = +3

Query: 72  GVLKRHKTPDKVNHTNKRSRKNRKAEAKVARSPTPTSGDSSEEDLPSTNGAPEEVMVYKE 251
           GVLKRH++ +K +   + ++K++  E  +  +P   S DS EE   S+  A  E MVY+E
Sbjct: 7   GVLKRHRSHEKFDK-KRDTKKHKHVEKTIVSNP---STDSPEE---SSIEAESEAMVYRE 59

Query: 252 PSMYDNLLTTLGSSNKTLAN 311
           P+ Y NLL +LGSSNK +A+
Sbjct: 60  PTQYQNLLVSLGSSNKVVAD 79


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