BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025065
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus c...   198   4e-49
ref|XP_002298107.1| peptide deformylase [Populus trichocarpa] gi...   189   2e-46
dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]                         186   3e-45
ref|XP_002281834.1| PREDICTED: peptide deformylase 1A, chloropla...   182   4e-44
ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloropla...   178   5e-43

>ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223543236|gb|EEF44768.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 266

 Score =  198 bits (504), Expect = 4e-49
 Identities = 106/178 (59%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
 Frame = +3

Query: 36  MDTIHRISPRLLPISIAEKCFKLTKSNHLLKYPILGFHGNLEQPPKPRVSDLKRAFNGSL 215
           M+T+HR S RLLPIS+A+KC K TK + + +                R+   K  F  ++
Sbjct: 1   METLHRFSLRLLPISLADKCLKPTKHHPIYRLT--------------RIPISKPDFRTTI 46

Query: 216 ITNXXXXXXXXXXXXXAGWFLGIGDKKPM-LPDIVKAGDPVLHEPAQDVSTDEIGSEKIQ 392
             +             AGW LG+G+ K M LPDIVKAGDPVLHEPA++V  DEIGSE+IQ
Sbjct: 47  PYSITRKSLSSSSIAKAGWLLGLGENKKMSLPDIVKAGDPVLHEPAREVDPDEIGSERIQ 106

Query: 393 KIIDDMIKVMRKAPGVGLAAPQIGVPLKIIVLEDTNEYIGYAPKEETEAQDRRPFDLL 566
           KIIDDM+KVMR+APGVGLAAPQIGVPL+IIVLEDT EYIGYAPKEET+AQDRRPFDLL
Sbjct: 107 KIIDDMVKVMRRAPGVGLAAPQIGVPLRIIVLEDTTEYIGYAPKEETKAQDRRPFDLL 164


>ref|XP_002298107.1| peptide deformylase [Populus trichocarpa]
           gi|222845365|gb|EEE82912.1| peptide deformylase [Populus
           trichocarpa]
          Length = 299

 Score =  189 bits (481), Expect = 2e-46
 Identities = 104/188 (55%), Positives = 125/188 (66%), Gaps = 1/188 (0%)
 Frame = +3

Query: 6   IGNALTEEQEMDTIHRISPRLLPISIAEKCFKLTKSNHLLKYPILGFHGNLEQPPKPRVS 185
           +G   +    M+++HR S RLLPIS+AEKCFK T    + ++  +         P P  +
Sbjct: 24  VGVQHSSSYHMESLHRCSLRLLPISLAEKCFKPTTLPTIFRFTRMLVPKPEFMNPNPHFT 83

Query: 186 DLKRAFNGSLITNXXXXXXXXXXXXXAGWFLGIGDKKPM-LPDIVKAGDPVLHEPAQDVS 362
             K   +                   AGW LG+G+KK   LPDIVKAGDPVLHEPA++V 
Sbjct: 84  TRKSLSSSHTAK--------------AGWLLGMGEKKKTSLPDIVKAGDPVLHEPAREVD 129

Query: 363 TDEIGSEKIQKIIDDMIKVMRKAPGVGLAAPQIGVPLKIIVLEDTNEYIGYAPKEETEAQ 542
             EIGSE+IQKIIDDM+KVMR APGVGLAAPQIG+PL+IIVLEDT EYIGYAPK ET+AQ
Sbjct: 130 PKEIGSERIQKIIDDMVKVMRMAPGVGLAAPQIGIPLRIIVLEDTAEYIGYAPKNETKAQ 189

Query: 543 DRRPFDLL 566
           DRRPFDLL
Sbjct: 190 DRRPFDLL 197


>dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
          Length = 274

 Score =  186 bits (471), Expect = 3e-45
 Identities = 107/183 (58%), Positives = 125/183 (68%), Gaps = 6/183 (3%)
 Frame = +3

Query: 36  MDTIHRISPRLLPISIAEKCFKLTKSNH-----LLKYPILGFHGNLEQPPKPRVSDLKRA 200
           M+T+ R S RLLPIS+AEKC  L    H     +   P+  F       P+   S+ K  
Sbjct: 1   METLQRFSLRLLPISLAEKC--LNPYTHGVPRAVTLAPLSRFARMSISKPEFLSSNPKST 58

Query: 201 FNGSLITNXXXXXXXXXXXXXAGWFLGIGDKKPM-LPDIVKAGDPVLHEPAQDVSTDEIG 377
           F+ S  ++             AGWFLG+G+KK    PDIVKAGDPVLHEPA++V  +EIG
Sbjct: 59  FHNSFSSSLTAK---------AGWFLGLGEKKKTSFPDIVKAGDPVLHEPAREVDPEEIG 109

Query: 378 SEKIQKIIDDMIKVMRKAPGVGLAAPQIGVPLKIIVLEDTNEYIGYAPKEETEAQDRRPF 557
           SE+IQKIIDDMIK MR APGVGLAAPQIGVPL+IIVLEDT EYI YAPKEET+AQDRRPF
Sbjct: 110 SERIQKIIDDMIKAMRMAPGVGLAAPQIGVPLRIIVLEDTKEYIRYAPKEETKAQDRRPF 169

Query: 558 DLL 566
           DLL
Sbjct: 170 DLL 172


>ref|XP_002281834.1| PREDICTED: peptide deformylase 1A, chloroplastic [Vitis vinifera]
           gi|297743418|emb|CBI36285.3| unnamed protein product
           [Vitis vinifera]
          Length = 277

 Score =  182 bits (461), Expect = 4e-44
 Identities = 100/177 (56%), Positives = 115/177 (64%)
 Frame = +3

Query: 36  MDTIHRISPRLLPISIAEKCFKLTKSNHLLKYPILGFHGNLEQPPKPRVSDLKRAFNGSL 215
           M++I R S RLLP  +AE C     ++     P L FH  L    KP  SD  R F  S 
Sbjct: 1   MESISRFSQRLLPTCLAENCLINPITSPFRLIPSLQFHPTLIPTSKPGPSDPNRIF--ST 58

Query: 216 ITNXXXXXXXXXXXXXAGWFLGIGDKKPMLPDIVKAGDPVLHEPAQDVSTDEIGSEKIQK 395
                           AGW LG+GDKKP LP+IVKAGDPVLHE AQ+V   EIGS++IQK
Sbjct: 59  RKTYRPSSSSSTLIASAGWILGLGDKKPALPEIVKAGDPVLHESAQEVEPGEIGSDRIQK 118

Query: 396 IIDDMIKVMRKAPGVGLAAPQIGVPLKIIVLEDTNEYIGYAPKEETEAQDRRPFDLL 566
           IIDDMIK MR APGVGLAAPQIG+PL+IIVLEDT EYI Y  K+  +AQ+RRPFDLL
Sbjct: 119 IIDDMIKAMRTAPGVGLAAPQIGIPLRIIVLEDTKEYISYDRKDVIKAQERRPFDLL 175


>ref|XP_004156806.1| PREDICTED: peptide deformylase 1A, chloroplastic-like isoform 1
           [Cucumis sativus]
          Length = 267

 Score =  178 bits (452), Expect = 5e-43
 Identities = 101/182 (55%), Positives = 121/182 (66%), Gaps = 5/182 (2%)
 Frame = +3

Query: 36  MDTIHRISPRLLPISIAEKCFKLT----KSNHLLKYPILGFHGNLEQPPKPRVSDLKRAF 203
           M+ IHR S RL PIS+AE+C K +        L+  PI         P  P+   + + +
Sbjct: 1   MEAIHRFSFRLFPISLAERCRKPSLLPPNFRKLIHRPISS------SPNIPKFIPVPKTY 54

Query: 204 NGSLITNXXXXXXXXXXXXXAGWFLGIGDKKPM-LPDIVKAGDPVLHEPAQDVSTDEIGS 380
           + S  +              AGWFLG+G++K M LP IVKAGDPVLHEPA++V   EIGS
Sbjct: 55  SSSSTS-----------IAKAGWFLGLGEQKKMSLPSIVKAGDPVLHEPAREVDPKEIGS 103

Query: 381 EKIQKIIDDMIKVMRKAPGVGLAAPQIGVPLKIIVLEDTNEYIGYAPKEETEAQDRRPFD 560
           EK+QKIIDDMI  MRKAPGVGLAAPQIG+PL+IIVLEDT EYI YAPKEE +AQDRR FD
Sbjct: 104 EKVQKIIDDMILTMRKAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEIKAQDRRSFD 163

Query: 561 LL 566
           LL
Sbjct: 164 LL 165