BLASTX nr result

ID: Cimicifuga21_contig00025060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025060
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283193.1| PREDICTED: phytoene synthase, chloroplastic ...   284   2e-74
emb|CAN70878.1| hypothetical protein VITISV_032970 [Vitis vinifera]   284   2e-74
gb|ACR61392.1| phytoene synthase protein [Fragaria x ananassa]        283   4e-74
ref|XP_003633261.1| PREDICTED: phytoene synthase, chloroplastic ...   272   5e-71
gb|AFP65822.1| phytoene synthase, partial [Eriobotrya japonica]       268   1e-69

>ref|XP_002283193.1| PREDICTED: phytoene synthase, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 396

 Score =  284 bits (726), Expect = 2e-74
 Identities = 146/219 (66%), Positives = 168/219 (76%), Gaps = 1/219 (0%)
 Frame = -2

Query: 656 MTSVVLWVVSPKENLTCVVRFMXXXXXXXXXXXXXXXGSSFLNISTGFSVLPSEIVNPSA 477
           M+ V+LWVV PKEN +    F                  S L  STGFS + + + NPS 
Sbjct: 1   MSGVLLWVVCPKENASFSSLFSFIPRNGMQRRFKP---GSRLKFSTGFSAVRNAVANPSI 57

Query: 476 SSEEKVYQVVLKQAALVGEEKIMKKRSYVDLKHSKD-DGMTNPSLLNEAYERCGEVCAEY 300
           SSEE+VY+VVL+QAALV E+K   +   +DLK   + DGM N  LLN AY+RCGEVCAEY
Sbjct: 58  SSEERVYEVVLRQAALVREQK---RDRALDLKKPVETDGMVNWDLLNGAYDRCGEVCAEY 114

Query: 299 AKTFYLGTLLMTPERKRAVWAIYVWCRRTDELVDGPNASHITPIALDRWEQRLVDLFEGR 120
           AKTFYLGTLLMTPER+RAVWAIYVWCRRTDELVDGPNASH++P ALDRWEQRL+DLFEG 
Sbjct: 115 AKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHMSPKALDRWEQRLIDLFEGH 174

Query: 119 PYDLYDAALSDTVAKYPVDIQPFMDMIDGMRLDLKKSRY 3
           PYD+YDAALSDTVAKYPVD+QPF DMI+GMRLDL+KSRY
Sbjct: 175 PYDMYDAALSDTVAKYPVDVQPFKDMIEGMRLDLRKSRY 213


>emb|CAN70878.1| hypothetical protein VITISV_032970 [Vitis vinifera]
          Length = 428

 Score =  284 bits (726), Expect = 2e-74
 Identities = 146/219 (66%), Positives = 168/219 (76%), Gaps = 1/219 (0%)
 Frame = -2

Query: 656 MTSVVLWVVSPKENLTCVVRFMXXXXXXXXXXXXXXXGSSFLNISTGFSVLPSEIVNPSA 477
           M+ V+LWVV PKEN +    F                  S L  STGFS + + + NPS 
Sbjct: 1   MSGVLLWVVCPKENASFSSLFSFIPRNGMQRRFKP---GSRLKFSTGFSAVRNAVANPSI 57

Query: 476 SSEEKVYQVVLKQAALVGEEKIMKKRSYVDLKHSKD-DGMTNPSLLNEAYERCGEVCAEY 300
           SSEE+VY+VVL+QAALV E+K   +   +DLK   + DGM N  LLN AY+RCGEVCAEY
Sbjct: 58  SSEERVYEVVLRQAALVREQK---RDRALDLKKPVETDGMVNWDLLNGAYDRCGEVCAEY 114

Query: 299 AKTFYLGTLLMTPERKRAVWAIYVWCRRTDELVDGPNASHITPIALDRWEQRLVDLFEGR 120
           AKTFYLGTLLMTPER+RAVWAIYVWCRRTDELVDGPNASH++P ALDRWEQRL+DLFEG 
Sbjct: 115 AKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASHMSPKALDRWEQRLIDLFEGH 174

Query: 119 PYDLYDAALSDTVAKYPVDIQPFMDMIDGMRLDLKKSRY 3
           PYD+YDAALSDTVAKYPVD+QPF DMI+GMRLDL+KSRY
Sbjct: 175 PYDMYDAALSDTVAKYPVDVQPFKDMIEGMRLDLRKSRY 213


>gb|ACR61392.1| phytoene synthase protein [Fragaria x ananassa]
          Length = 398

 Score =  283 bits (723), Expect = 4e-74
 Identities = 143/219 (65%), Positives = 167/219 (76%), Gaps = 1/219 (0%)
 Frame = -2

Query: 656 MTSVVLWVVSPKENLTCVVRFMXXXXXXXXXXXXXXXGSSFLNISTGFSVLPSEIVNPSA 477
           M+ V+LWVV+PKEN T ++  M                 S L+ S G       + +P  
Sbjct: 1   MSGVLLWVVNPKENATSLLSLMPRIGSPKRSKFC-----SRLSFSPGIIAYSGAVAHPPR 55

Query: 476 SSEEKVYQVVLKQAALVGEEKIMKKRSY-VDLKHSKDDGMTNPSLLNEAYERCGEVCAEY 300
           SSEE+VY+VVLKQAALV E++  K+++   D +    DGMTN  LLNEAY+RCGEVCAEY
Sbjct: 56  SSEERVYEVVLKQAALVREQRRPKEKALDFDQRIEGSDGMTNWDLLNEAYDRCGEVCAEY 115

Query: 299 AKTFYLGTLLMTPERKRAVWAIYVWCRRTDELVDGPNASHITPIALDRWEQRLVDLFEGR 120
           AKTFYLGTLLMTPER+RAVWAIYVWCRRTDELVDGPNAS+ITP ALDRWE+RL DLFEGR
Sbjct: 116 AKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASYITPKALDRWEKRLTDLFEGR 175

Query: 119 PYDLYDAALSDTVAKYPVDIQPFMDMIDGMRLDLKKSRY 3
           PYD+YDAALSDTV KYPVDIQPF DM++GMRLDL+KSRY
Sbjct: 176 PYDMYDAALSDTVTKYPVDIQPFKDMVEGMRLDLRKSRY 214


>ref|XP_003633261.1| PREDICTED: phytoene synthase, chloroplastic isoform 2 [Vitis
           vinifera]
          Length = 415

 Score =  272 bits (696), Expect = 5e-71
 Identities = 146/238 (61%), Positives = 168/238 (70%), Gaps = 20/238 (8%)
 Frame = -2

Query: 656 MTSVVLWVVSPKENLTCVVRFMXXXXXXXXXXXXXXXGSSFLNISTGFSVLPSEIVNPSA 477
           M+ V+LWVV PKEN +    F                  S L  STGFS + + + NPS 
Sbjct: 1   MSGVLLWVVCPKENASFSSLFSFIPRNGMQRRFKP---GSRLKFSTGFSAVRNAVANPSI 57

Query: 476 SSEEKVYQVVLKQAALVGEEKIMKKRSYVDLKHSKD-DGMTNPSLLNEAYERCGEVCAEY 300
           SSEE+VY+VVL+QAALV E+K   +   +DLK   + DGM N  LLN AY+RCGEVCAEY
Sbjct: 58  SSEERVYEVVLRQAALVREQK---RDRALDLKKPVETDGMVNWDLLNGAYDRCGEVCAEY 114

Query: 299 AKTFYLGTLLMTPERKRAVWAIY-------------------VWCRRTDELVDGPNASHI 177
           AKTFYLGTLLMTPER+RAVWAIY                   VWCRRTDELVDGPNASH+
Sbjct: 115 AKTFYLGTLLMTPERRRAVWAIYALRLPDKFSWQLNHAFSSAVWCRRTDELVDGPNASHM 174

Query: 176 TPIALDRWEQRLVDLFEGRPYDLYDAALSDTVAKYPVDIQPFMDMIDGMRLDLKKSRY 3
           +P ALDRWEQRL+DLFEG PYD+YDAALSDTVAKYPVD+QPF DMI+GMRLDL+KSRY
Sbjct: 175 SPKALDRWEQRLIDLFEGHPYDMYDAALSDTVAKYPVDVQPFKDMIEGMRLDLRKSRY 232


>gb|AFP65822.1| phytoene synthase, partial [Eriobotrya japonica]
          Length = 382

 Score =  268 bits (684), Expect = 1e-69
 Identities = 132/179 (73%), Positives = 148/179 (82%)
 Frame = -2

Query: 539 SFLNISTGFSVLPSEIVNPSASSEEKVYQVVLKQAALVGEEKIMKKRSYVDLKHSKDDGM 360
           S L  S+G       + NP+ SSEEKVY+VVLKQAALV E   +KK+S +DL     DG 
Sbjct: 21  SKLGFSSGVLAYSGAVANPARSSEEKVYEVVLKQAALVREPNTVKKKS-LDLDERITDGW 79

Query: 359 TNPSLLNEAYERCGEVCAEYAKTFYLGTLLMTPERKRAVWAIYVWCRRTDELVDGPNASH 180
            N  LLN+AY+RCGEVCAEYAKTFYLGTLLMTPER+RAVWAIYVWCRRTDELVDGPNAS+
Sbjct: 80  NNWDLLNKAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIYVWCRRTDELVDGPNASY 139

Query: 179 ITPIALDRWEQRLVDLFEGRPYDLYDAALSDTVAKYPVDIQPFMDMIDGMRLDLKKSRY 3
           ITP ALDRWE+RL DLFEGRPYD+ DAALSDTV KYPVDIQPF DM++GMRLDL+KSRY
Sbjct: 140 ITPKALDRWEKRLTDLFEGRPYDMLDAALSDTVTKYPVDIQPFRDMVEGMRLDLRKSRY 198


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