BLASTX nr result

ID: Cimicifuga21_contig00025053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025053
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250...   238   2e-60
ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinu...   219   9e-55
ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248...   218   1e-54
emb|CBI24230.3| unnamed protein product [Vitis vinifera]              218   1e-54
ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|2...   218   2e-54

>ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  238 bits (606), Expect = 2e-60
 Identities = 136/263 (51%), Positives = 167/263 (63%), Gaps = 4/263 (1%)
 Frame = +1

Query: 1    HNCYNCGLVFXXXXXXXXXXXXXXXPNFNKPYRVCDECYTKLKKAMESGLTSRLSKIQSG 180
            HNCYNCGLVF               PN NKPYRVCD+C+TKLKKAMESG   R+ K +S 
Sbjct: 665  HNCYNCGLVFCNTCSSRKSLKASLAPNMNKPYRVCDDCFTKLKKAMESGSVLRIPKARSS 724

Query: 181  PMQYNCNEVAEKETLDPRLHGQLSRISSVESLKLGENKHTXXXXXXXXXXXXFAPIPSGS 360
             +    NE+AE++T+ PR+ GQLSR+SSV+S    E+KH              +P  +G+
Sbjct: 725  NILQKSNEIAERDTMGPRVQGQLSRLSSVDSFSRAESKHYKCDTKLEFNDARVSPHLNGN 784

Query: 361  SQWGSFYSVK-STSLIVSSKKLFSASVPGSKTVSRAXXXXXXXXXXXXXXXLLPT--ILA 531
             Q GSF+S K S SL   S+K+FSAS PGS+ VSRA               L  +  ++ 
Sbjct: 785  VQRGSFHSSKLSNSLFGGSRKIFSASRPGSRIVSRATSPVSGKSSPPQSAMLAASLAVVR 844

Query: 532  SPE-VDTDSKQENDSLSQEIMELKAQVENLTSKSKLLEAELESTSRKLKEANSKAGEETA 708
            SPE  D D K  NDSLS+EI+ L+AQVENLT KS++LEAELE +SRKLKE  + A  E  
Sbjct: 845  SPEATDDDPKHTNDSLSREIINLRAQVENLTGKSQILEAELERSSRKLKEVTAVAEGEAE 904

Query: 709  KCKAAKEVIKSLTAQLKDMAELV 777
            KCKAAKEVIKSLTAQLK+MAE V
Sbjct: 905  KCKAAKEVIKSLTAQLKEMAERV 927


>ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223533605|gb|EEF35343.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1100

 Score =  219 bits (557), Expect = 9e-55
 Identities = 129/262 (49%), Positives = 167/262 (63%), Gaps = 5/262 (1%)
 Frame = +1

Query: 1    HNCYNCGLVFXXXXXXXXXXXXXXXPNFNKPYRVCDECYTKLKKAMESGLTSRLSKIQSG 180
            HNCYNCGLVF               PN NKP+RVCD CY+KL+KA+E+  +S+ S  + G
Sbjct: 674  HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPFRVCDNCYSKLRKAIETDASSQSSVSRRG 733

Query: 181  PMQYNCNEVAEK-ETLDPRLHGQLSRISSVESLKLGENKHTXXXXXXXXXXXXFAPIPSG 357
             + +  NE  +K E LD R   QL+R SS+ESLK  EN+ +             +P+P+G
Sbjct: 734  SVNHGSNEFIDKDEKLDSRSRAQLARFSSMESLKQAENR-SKRNKKLEFNSSRVSPVPNG 792

Query: 358  SSQWGSFYSVKSTS-LIVSSKKLFSASVPGSKTVSRAXXXXXXXXXXXXXXXLLPTI--L 528
             SQWG+    KS + +  SSKK FSASVPGS+ VSRA                 PT+  L
Sbjct: 793  GSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGL 852

Query: 529  ASPE-VDTDSKQENDSLSQEIMELKAQVENLTSKSKLLEAELESTSRKLKEANSKAGEET 705
             SP+ V  D+K+ N+SLSQE+ +L+AQVE+LT K+++ E ELE  +++LKEA + AGEET
Sbjct: 853  TSPKLVVNDAKRTNESLSQEVNKLRAQVESLTRKAQVQEVELERAAKQLKEAIAIAGEET 912

Query: 706  AKCKAAKEVIKSLTAQLKDMAE 771
            AKCKAAKEVIKSLTAQLKDMAE
Sbjct: 913  AKCKAAKEVIKSLTAQLKDMAE 934


>ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
            vinifera]
          Length = 1107

 Score =  218 bits (556), Expect = 1e-54
 Identities = 128/262 (48%), Positives = 167/262 (63%), Gaps = 5/262 (1%)
 Frame = +1

Query: 1    HNCYNCGLVFXXXXXXXXXXXXXXXPNFNKPYRVCDECYTKLKKAMESGLTSRLSKIQSG 180
            HNCYNCGLVF               PN NKPYRVCD C++KL+KA+E+  +S+ +  + G
Sbjct: 682  HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQSAVSRRG 741

Query: 181  PMQYNCNEVAEK-ETLDPRLHGQLSRISSVESLKLGENKHTXXXXXXXXXXXXFAPIPSG 357
                  NE+ +K E LD R   QL+R SS+ESLK  E++ +             +PIP+G
Sbjct: 742  VTNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNG 801

Query: 358  SSQWGSFYSVKSTSLIV-SSKKLFSASVPGSKTVSRAXXXXXXXXXXXXXXXLLPTI--L 528
             SQWG   ++KS + +  SSKK FSASVPGS+ VSR                  PT+  L
Sbjct: 802  GSQWGG--ALKSLNPVFGSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGL 859

Query: 529  ASPEVDTD-SKQENDSLSQEIMELKAQVENLTSKSKLLEAELESTSRKLKEANSKAGEET 705
             SP++  D +K+ NDSLSQE+++L+ QVENLT K++L E ELE T+++LKEA + AGEET
Sbjct: 860  TSPKIVVDDAKRTNDSLSQEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGEET 919

Query: 706  AKCKAAKEVIKSLTAQLKDMAE 771
            A+CKAAKEVIKSLTAQLKDMAE
Sbjct: 920  ARCKAAKEVIKSLTAQLKDMAE 941


>emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  218 bits (556), Expect = 1e-54
 Identities = 128/262 (48%), Positives = 167/262 (63%), Gaps = 5/262 (1%)
 Frame = +1

Query: 1    HNCYNCGLVFXXXXXXXXXXXXXXXPNFNKPYRVCDECYTKLKKAMESGLTSRLSKIQSG 180
            HNCYNCGLVF               PN NKPYRVCD C++KL+KA+E+  +S+ +  + G
Sbjct: 528  HNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQSAVSRRG 587

Query: 181  PMQYNCNEVAEK-ETLDPRLHGQLSRISSVESLKLGENKHTXXXXXXXXXXXXFAPIPSG 357
                  NE+ +K E LD R   QL+R SS+ESLK  E++ +             +PIP+G
Sbjct: 588  VTNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNG 647

Query: 358  SSQWGSFYSVKSTSLIV-SSKKLFSASVPGSKTVSRAXXXXXXXXXXXXXXXLLPTI--L 528
             SQWG   ++KS + +  SSKK FSASVPGS+ VSR                  PT+  L
Sbjct: 648  GSQWGG--ALKSLNPVFGSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGL 705

Query: 529  ASPEVDTD-SKQENDSLSQEIMELKAQVENLTSKSKLLEAELESTSRKLKEANSKAGEET 705
             SP++  D +K+ NDSLSQE+++L+ QVENLT K++L E ELE T+++LKEA + AGEET
Sbjct: 706  TSPKIVVDDAKRTNDSLSQEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGEET 765

Query: 706  AKCKAAKEVIKSLTAQLKDMAE 771
            A+CKAAKEVIKSLTAQLKDMAE
Sbjct: 766  ARCKAAKEVIKSLTAQLKDMAE 787


>ref|XP_002298476.1| predicted protein [Populus trichocarpa] gi|222845734|gb|EEE83281.1|
            predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  218 bits (554), Expect = 2e-54
 Identities = 127/262 (48%), Positives = 165/262 (62%), Gaps = 5/262 (1%)
 Frame = +1

Query: 1    HNCYNCGLVFXXXXXXXXXXXXXXXPNFNKPYRVCDECYTKLKKAMESGLTSRLSKIQSG 180
            HNCYNCGLV+               PN NK YRVCD CY KL+KAME+  +S+ S  + G
Sbjct: 685  HNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCYNKLRKAMETDASSQSSVSRRG 744

Query: 181  PMQYNCNEVAEK-ETLDPRLHGQLSRISSVESLKLGENKHTXXXXXXXXXXXXFAPIPSG 357
             +    +E  +K E LD R   QL+R SS+ESLK  E++ +             +P+P+G
Sbjct: 745  SVNQGPSEFIDKDEKLDTRSRAQLARFSSMESLKQAESR-SKRNKKLEFNSSRVSPVPNG 803

Query: 358  SSQWGSFYSVKSTS-LIVSSKKLFSASVPGSKTVSRAXXXXXXXXXXXXXXXLLPTI--L 528
             SQWG+F   KS + +  SSKK FSASVPGS+ +SRA                 PT+  L
Sbjct: 804  GSQWGAFNISKSFNPMFASSKKFFSASVPGSRIISRATSPISRRPSPPRSTTPTPTLGGL 863

Query: 529  ASPEVDTD-SKQENDSLSQEIMELKAQVENLTSKSKLLEAELESTSRKLKEANSKAGEET 705
             SP++  D +K+ N+SLSQE+++L+AQVENL+ K++L E ELE  + +LKEA + AGEET
Sbjct: 864  TSPKIVVDDAKRTNESLSQEVLKLRAQVENLSHKTQLQEVELERITERLKEARAIAGEET 923

Query: 706  AKCKAAKEVIKSLTAQLKDMAE 771
            AKCKAAKEVIKSLTAQLKDMAE
Sbjct: 924  AKCKAAKEVIKSLTAQLKDMAE 945


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