BLASTX nr result

ID: Cimicifuga21_contig00025037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025037
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24131.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medic...   102   3e-20
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...   100   1e-19
ref|XP_003538968.1| PREDICTED: general transcription factor 3C p...    99   3e-19
ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...    99   3e-19

>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/93 (63%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
 Frame = +2

Query: 83  GLEWHSDDSDDESPRAR-RESPLPNLLKDNEHYQLIVNLCKALTSLRRYWDALKIIQDTQ 259
           G++W+SD+SDDESP  + RE PLPNLLKD EH+ LI++LCKAL SLR+YW+AL II  T 
Sbjct: 608 GVDWYSDESDDESPEQKLREPPLPNLLKDEEHHHLILDLCKALASLRKYWEALDIINLTL 667

Query: 260 RLACITLSTEKKDELRSLEAQVAHNITDPTFAF 358
           RLA   +  EKK+ELRSL AQ+A+NITDP   F
Sbjct: 668 RLAYNIMPIEKKEELRSLGAQIAYNITDPKHGF 700


>ref|XP_003607543.1| Transcription factor tau subunit sfc4 [Medicago truncatula]
           gi|355508598|gb|AES89740.1| Transcription factor tau
           subunit sfc4 [Medicago truncatula]
          Length = 937

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/92 (56%), Positives = 67/92 (72%)
 Frame = +2

Query: 83  GLEWHSDDSDDESPRARRESPLPNLLKDNEHYQLIVNLCKALTSLRRYWDALKIIQDTQR 262
           G++W SDDSDDE      +SPL NL KD  ++QLI++LC AL SL+RY +AL+II  T R
Sbjct: 631 GIDWLSDDSDDEPQEPNTDSPLCNLHKDEGYHQLIIDLCNALASLQRYSEALEIINLTLR 690

Query: 263 LACITLSTEKKDELRSLEAQVAHNITDPTFAF 358
           LA  +LSTEK ++LRSLE Q+A+N TDP   F
Sbjct: 691 LAHTSLSTEKNEKLRSLEVQMAYNTTDPKQGF 722


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Glycine max]
          Length = 919

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/75 (66%), Positives = 61/75 (81%)
 Frame = +2

Query: 134 RESPLPNLLKDNEHYQLIVNLCKALTSLRRYWDALKIIQDTQRLACITLSTEKKDELRSL 313
           RE PL NLLKD EH+QLI++LCKAL SL+RYW+AL+II  + RLA  +LSTEKK+ELRSL
Sbjct: 625 REPPLCNLLKDEEHHQLIIDLCKALASLQRYWEALEIINLSLRLAHTSLSTEKKEELRSL 684

Query: 314 EAQVAHNITDPTFAF 358
            AQ+A+N TDP   F
Sbjct: 685 GAQMAYNTTDPKHGF 699


>ref|XP_003538968.1| PREDICTED: general transcription factor 3C polypeptide 3-like
           [Glycine max]
          Length = 929

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/75 (66%), Positives = 60/75 (80%)
 Frame = +2

Query: 134 RESPLPNLLKDNEHYQLIVNLCKALTSLRRYWDALKIIQDTQRLACITLSTEKKDELRSL 313
           RE PL NLLKD EH+QLI++LCKAL SL+RYW+AL+II    RLA  +LSTEKK+ELRSL
Sbjct: 634 REPPLCNLLKDEEHHQLIIDLCKALASLQRYWEALEIINLFLRLAHTSLSTEKKEELRSL 693

Query: 314 EAQVAHNITDPTFAF 358
            AQ+A+N TDP   F
Sbjct: 694 GAQMAYNTTDPKHGF 708


>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis
            vinifera]
          Length = 1110

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/75 (65%), Positives = 58/75 (77%)
 Frame = +2

Query: 134  RESPLPNLLKDNEHYQLIVNLCKALTSLRRYWDALKIIQDTQRLACITLSTEKKDELRSL 313
            RE PLPNLLKD EH+ LI++LCKAL SLR+YW+AL II  T RLA   +  EKK+ELRSL
Sbjct: 821  REPPLPNLLKDEEHHHLILDLCKALASLRKYWEALDIINLTLRLAYNIMPIEKKEELRSL 880

Query: 314  EAQVAHNITDPTFAF 358
             AQ+A+NITDP   F
Sbjct: 881  GAQIAYNITDPKHGF 895


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