BLASTX nr result

ID: Cimicifuga21_contig00025036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025036
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238608.1| ubiquitin specific protease 12 [Glycine max]...    57   2e-08
dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]                        61   8e-08
gb|ABA94399.1| Ubiquitin carboxyl-terminal hydrolase family prot...    61   1e-07
gb|EEE52311.1| hypothetical protein OsJ_34325 [Oryza sativa Japo...    61   1e-07
gb|EAY81382.1| hypothetical protein OsI_36553 [Oryza sativa Indi...    61   1e-07

>ref|NP_001238608.1| ubiquitin specific protease 12 [Glycine max]
            gi|255317079|gb|ACU01857.1| ubiquitin specific protease
            12 [Glycine max] gi|255317096|gb|ACU01870.1| ubiquitin
            specific protease 12 [Glycine max]
          Length = 1116

 Score = 57.0 bits (136), Expect(2) = 2e-08
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = +3

Query: 3    LRAEEIPEEEKNLGPRDRLIHVYHFIKDLSHSGMLSLNIKH 125
            LRAEE+ EEEKNLGP DRLIHVYHF+KD + +     N  H
Sbjct: 979  LRAEEVLEEEKNLGPHDRLIHVYHFLKDTTQNQQQVQNFGH 1019



 Score = 26.2 bits (56), Expect(2) = 2e-08
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 233  QIRNFGKPFFFTIHE 277
            Q++NFG PF   IHE
Sbjct: 1013 QVQNFGHPFLLVIHE 1027


>dbj|BAF98601.1| CM0545.290.nc [Lotus japonicus]
          Length = 1118

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/60 (55%), Positives = 37/60 (61%)
 Frame = +3

Query: 3    LRAEEIPEEEKNLGPRDRLIHVYHFIKDLSHSGMLSLNIKHNSSSNWYLSTEEGTASTLI 182
            LRAEE+PEEEKNLGP DRLIHVYHF KD S + M       N    ++L   EG   T I
Sbjct: 979  LRAEEVPEEEKNLGPHDRLIHVYHFTKDTSQNQMQI----QNFGEPFFLVIREGETLTEI 1034


>gb|ABA94399.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
            [Oryza sativa Japonica Group]
          Length = 1451

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/54 (57%), Positives = 36/54 (66%)
 Frame = +3

Query: 3    LRAEEIPEEEKNLGPRDRLIHVYHFIKDLSHSGMLSLNIKHNSSSNWYLSTEEG 164
            LRAEEIPEEEKNLGP DRLIHVYHF+KD   +  +      N    +YL+  EG
Sbjct: 983  LRAEEIPEEEKNLGPNDRLIHVYHFMKDPLQNQQI-----QNFGDPFYLAIREG 1031


>gb|EEE52311.1| hypothetical protein OsJ_34325 [Oryza sativa Japonica Group]
          Length = 1142

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/54 (57%), Positives = 36/54 (66%)
 Frame = +3

Query: 3    LRAEEIPEEEKNLGPRDRLIHVYHFIKDLSHSGMLSLNIKHNSSSNWYLSTEEG 164
            LRAEEIPEEEKNLGP DRLIHVYHF+KD   +  +      N    +YL+  EG
Sbjct: 1004 LRAEEIPEEEKNLGPNDRLIHVYHFMKDPLQNQQI-----QNFGDPFYLAIREG 1052


>gb|EAY81382.1| hypothetical protein OsI_36553 [Oryza sativa Indica Group]
          Length = 1148

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 31/54 (57%), Positives = 36/54 (66%)
 Frame = +3

Query: 3    LRAEEIPEEEKNLGPRDRLIHVYHFIKDLSHSGMLSLNIKHNSSSNWYLSTEEG 164
            LRAEEIPEEEKNLGP DRLIHVYHF+KD   +  +      N    +YL+  EG
Sbjct: 1010 LRAEEIPEEEKNLGPNDRLIHVYHFMKDPLQNQQI-----QNFGDPFYLAIREG 1058


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