BLASTX nr result

ID: Cimicifuga21_contig00025022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00025022
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containin...    82   3e-14
gb|ACN40315.1| unknown [Picea sitchensis]                              77   1e-12
gb|ABK25000.1| unknown [Picea sitchensis]                              77   1e-12
ref|XP_003526333.1| PREDICTED: zinc finger CCCH domain-containin...    74   9e-12
ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containin...    73   2e-11

>ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containing protein 13 [Vitis
           vinifera] gi|297739310|emb|CBI28961.3| unnamed protein
           product [Vitis vinifera]
          Length = 444

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +2

Query: 314 MADRKLFKTKLCVLYKRGNCSRQSCSFAHGDAELKRFSGSASFNGSRDYR 463
           M +RKL+KTKLCVLY+RG+C RQ+CSFAHGDAEL+ FSG  SFNG RDYR
Sbjct: 1   MVERKLYKTKLCVLYERGHCPRQTCSFAHGDAELRGFSG--SFNGRRDYR 48


>gb|ACN40315.1| unknown [Picea sitchensis]
          Length = 493

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = +2

Query: 314 MADRKLFKTKLCVLYKRGNCSRQSCSFAHGDAELKRFSGSASFNGSRDYR 463
           M DR L+KTKLC LY+RG+C RQSCSFAHGDAEL+RFSGS   NG R++R
Sbjct: 2   MFDRDLYKTKLCTLYQRGHCPRQSCSFAHGDAELRRFSGSG--NGRREHR 49


>gb|ABK25000.1| unknown [Picea sitchensis]
          Length = 493

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = +2

Query: 314 MADRKLFKTKLCVLYKRGNCSRQSCSFAHGDAELKRFSGSASFNGSRDYR 463
           M DR L+KTKLC LY+RG+C RQSCSFAHGDAEL+RFSGS   NG R++R
Sbjct: 2   MFDRDLYKTKLCTLYQRGHCPRQSCSFAHGDAELRRFSGSG--NGRREHR 49


>ref|XP_003526333.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Glycine max]
          Length = 399

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/49 (69%), Positives = 41/49 (83%)
 Frame = +2

Query: 314 MADRKLFKTKLCVLYKRGNCSRQSCSFAHGDAELKRFSGSASFNGSRDY 460
           M +RK FKTKLCVLY+RG C+R +CSFAHG AEL+RF  SAS++G RDY
Sbjct: 1   MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSAELRRF--SASYSGRRDY 47


>ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Glycine max]
          Length = 417

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = +2

Query: 314 MADRKLFKTKLCVLYKRGNCSRQSCSFAHGDAELKRFSGSASFNGSRDY 460
           M +RK FKTKLCVLY+RG C+R +CSFAHG A+L+RF  SAS++G RDY
Sbjct: 1   MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSADLRRF--SASYSGRRDY 47


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