BLASTX nr result

ID: Cimicifuga21_contig00024478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024478
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68348.1| hypothetical protein VITISV_032025 [Vitis vinifera]    64   2e-08
emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]    63   3e-08
emb|CAN66167.1| hypothetical protein VITISV_000143 [Vitis vinifera]    63   3e-08
emb|CAN61030.1| hypothetical protein VITISV_003969 [Vitis vinifera]    63   3e-08
emb|CAN60975.1| hypothetical protein VITISV_018843 [Vitis vinifera]    63   3e-08

>emb|CAN68348.1| hypothetical protein VITISV_032025 [Vitis vinifera]
          Length = 1670

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/88 (39%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3    SLLSLLETIQLSTEEDERVWDNGVDP-FSVKLVYRVLEQERMTHSHLGIADFPFKKVWRP 179
            ++L  L   +++ EED  +W  G D  F VK VYRVL            ADFP   VW  
Sbjct: 1549 NMLVELRNYRVTLEEDSVLWRGGADGLFKVKEVYRVLANAEG-------ADFPHSNVWVG 1601

Query: 180  NIPSKVCFFVWAVLRGKILTVDNLTKRG 263
             +P K+ FF W    GK+LT+D L +RG
Sbjct: 1602 KVPIKIAFFAWEATWGKVLTLDRLQRRG 1629


>emb|CAN80288.1| hypothetical protein VITISV_006820 [Vitis vinifera]
          Length = 1894

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +3

Query: 6    LLSLLETIQLSTEEDERVWDN-GVDPFSVKLVYRVLEQERMTHSHLGIADFPFKKVWRPN 182
            +L+LL+  ++S EED   W   G D F  K  YR L       S   +  FP +++W   
Sbjct: 1732 MLNLLKDFRISQEEDSVRWKREGNDVFGAKGAYRSL-------SGYSVGAFPNRRIWMDR 1784

Query: 183  IPSKVCFFVWAVLRGKILTVDNLTKRG 263
            +P+KV FF W    GKILT+D L +RG
Sbjct: 1785 VPTKVSFFAWEAAWGKILTLDKLQRRG 1811


>emb|CAN66167.1| hypothetical protein VITISV_000143 [Vitis vinifera]
          Length = 251

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
 Frame = +3

Query: 6   LLSLLETIQLSTEEDERVWDNGVD-PFSVKLVYRVLEQERMTHSHLGIADFPFKKVWRPN 182
           LL +L   +LS+EED  +W  G    + VK  Y  L    +T++     DFP+K VW   
Sbjct: 41  LLIMLRDFKLSSEEDGVLWKRGGHGKYGVKEAYNGLV---VTNA----CDFPYKSVWVNK 93

Query: 183 IPSKVCFFVWAVLRGKILTVDNLTKRG 263
           +P+KV FF W    GKILT+D L KRG
Sbjct: 94  VPTKVAFFAWEAAWGKILTLDRLQKRG 120


>emb|CAN61030.1| hypothetical protein VITISV_003969 [Vitis vinifera]
          Length = 664

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
 Frame = +3

Query: 6   LLSLLETIQLSTEEDERVWDNGVDP-FSVKLVYRVLEQERMTHSHLGIADFPFKKVWRPN 182
           LL  L   + S E+D  VW  G +  F +K  YR+L++  +T        FP +++W   
Sbjct: 518 LLHTLRGYRPSLEDDSVVWRQGRNGIFKIKEAYRLLDKPNVTV-------FPARRIWVDR 570

Query: 183 IPSKVCFFVWAVLRGKILTVDNLTKRGL 266
           +P+KVCFF W    GK+LT+D L  RG+
Sbjct: 571 VPTKVCFFAWEATWGKVLTLDRLQLRGV 598


>emb|CAN60975.1| hypothetical protein VITISV_018843 [Vitis vinifera]
          Length = 629

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   SLLSLLETIQLSTEEDERVWDNGVDP-FSVKLVYRVLEQERMTHSHLGIADFPFKKVWRP 179
           +LL  L   +++ EED  +W  G D  F VK  YRVL            A FP   VW  
Sbjct: 509 NLLVELRNYRVTVEEDSILWKEGADGLFKVKKAYRVLANAEG-------AGFPHSNVWVD 561

Query: 180 NIPSKVCFFVWAVLRGKILTVDNLTKRG 263
            +P+K+ FF W    GK+LT+D L +RG
Sbjct: 562 KVPTKIAFFAWEATWGKVLTLDRLQRRG 589


Top