BLASTX nr result

ID: Cimicifuga21_contig00024470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024470
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317373.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
gb|AFK33304.1| unknown [Lotus japonicus]                              132   3e-29
ref|XP_002451379.1| hypothetical protein SORBIDRAFT_04g001080 [S...   131   6e-29
ref|XP_003637818.1| hypothetical protein MTR_103s0045 [Medicago ...   131   8e-29
gb|ADN34170.1| hypothetical protein [Cucumis melo subsp. melo]        128   5e-28

>ref|XP_002317373.1| predicted protein [Populus trichocarpa] gi|222860438|gb|EEE97985.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  134 bits (338), Expect = 8e-30
 Identities = 76/163 (46%), Positives = 92/163 (56%)
 Frame = +1

Query: 73  IQTLNHQLLQRCSVSXXXXXXXXXXXPLKRSIIXXXXXXXXXXXXXXXXXXNEATEHLNK 252
           +Q+L HQ LQRCSVS             KRS +                   + +E  N+
Sbjct: 11  LQSLTHQFLQRCSVSGTSKGKGKDGVAKKRSKVTTNKNKKSGSQDPSRSFSRQDSER-NR 69

Query: 253 MVDSCLNAPTPIRYLTPKQKAREAEREKLGLISKDRQREIDSLXXXXXXXXXXXXXXXXX 432
           + D C+NAP P+RYL PK +AREAEREK+GL+SKDR RE + L                 
Sbjct: 70  LYDQCINAPAPVRYLKPKDRAREAEREKMGLLSKDRIREKEILKKGGRQAMGVPDEPMII 129

Query: 433 XXXXXDLISLGLVDKEKIPKYELTVEDGRRLAKEYSRVLMRRH 561
                DLISLGLVD +KIPKYELT EDG +LAKEYSRVLMR+H
Sbjct: 130 GTPGLDLISLGLVDVDKIPKYELTEEDGMKLAKEYSRVLMRKH 172


>gb|AFK33304.1| unknown [Lotus japonicus]
          Length = 247

 Score =  132 bits (333), Expect = 3e-29
 Identities = 82/173 (47%), Positives = 97/173 (56%), Gaps = 3/173 (1%)
 Frame = +1

Query: 49  KPKPLISTIQT--LNHQLLQRCSVSXXXXXXXXXXX-PLKRSIIXXXXXXXXXXXXXXXX 219
           K KP + + Q+     QL+QRCSVS             LKRS I                
Sbjct: 6   KLKPFLHSTQSPCSGQQLIQRCSVSGTAKGKAKIKAGALKRSRITTKRGSEPSSGPPVGS 65

Query: 220 XXNEATEHLNKMVDSCLNAPTPIRYLTPKQKAREAEREKLGLISKDRQREIDSLXXXXXX 399
              +  E L    + CLNAPTP+RYLTPKQK REAEREK+GLISK+RQRE+D +      
Sbjct: 66  RERQERELL---YERCLNAPTPVRYLTPKQKKREAEREKMGLISKERQRELDMMKKKVFN 122

Query: 400 XXXXXXXXXXXXXXXXDLISLGLVDKEKIPKYELTVEDGRRLAKEYSRVLMRR 558
                           D ++LGLVD EK+PKYELTVEDGRRLAKEYSRVLMR+
Sbjct: 123 KYKAPEKPTIIGTPGLDYVTLGLVDVEKLPKYELTVEDGRRLAKEYSRVLMRK 175


>ref|XP_002451379.1| hypothetical protein SORBIDRAFT_04g001080 [Sorghum bicolor]
           gi|241931210|gb|EES04355.1| hypothetical protein
           SORBIDRAFT_04g001080 [Sorghum bicolor]
          Length = 265

 Score =  131 bits (330), Expect = 6e-29
 Identities = 82/187 (43%), Positives = 102/187 (54%), Gaps = 6/187 (3%)
 Frame = +1

Query: 19  VFITQKMIRLKPKPLISTIQTLNHQLLQRCSVSXXXXXXXXXXX--PLKRSIIXXXXXXX 192
           +F   K + + P  L S + + NHQL QR  VS             PLKRS I       
Sbjct: 9   MFRRLKTLTISPA-LASGVTSQNHQLQQRAPVSGTAKGKAKLKAGQPLKRSTIGAKKGAP 67

Query: 193 XXXXXXXXXXXNEATEHLNKMVDSCLNAPTPIRYLTPKQKAREAEREKLGLISKDRQREI 372
                       EA E +  + +SCLNA TP+R+L+PK++ REA+RE+LGL+SK+RQRE+
Sbjct: 68  STGGGGGGRGRREAIERITNISESCLNASTPLRHLSPKERLREAKREELGLVSKERQREL 127

Query: 373 D----SLXXXXXXXXXXXXXXXXXXXXXXDLISLGLVDKEKIPKYELTVEDGRRLAKEYS 540
           D                            D ISLGLVD+E IPKYELTVEDG+RLAKEYS
Sbjct: 128 DVAKAKAKAKSKSTGGGEGDRVLMGPPGLDYISLGLVDEEAIPKYELTVEDGQRLAKEYS 187

Query: 541 RVLMRRH 561
           RVLMRRH
Sbjct: 188 RVLMRRH 194


>ref|XP_003637818.1| hypothetical protein MTR_103s0045 [Medicago truncatula]
           gi|355503753|gb|AES84956.1| hypothetical protein
           MTR_103s0045 [Medicago truncatula]
          Length = 367

 Score =  131 bits (329), Expect = 8e-29
 Identities = 87/183 (47%), Positives = 103/183 (56%), Gaps = 3/183 (1%)
 Frame = +1

Query: 22  FITQK--MIRL-KPKPLISTIQTLNHQLLQRCSVSXXXXXXXXXXXPLKRSIIXXXXXXX 192
           FI+Q   M+RL K KP  S+     HQLLQRCSVS            LKRS I       
Sbjct: 50  FISQNSSMLRLTKLKPPSSS----PHQLLQRCSVSRTAKGKGKAGQILKRSKITVKKSGP 105

Query: 193 XXXXXXXXXXXNEATEHLNKMVDSCLNAPTPIRYLTPKQKAREAEREKLGLISKDRQREI 372
                       +  +   ++ D CLNAPTP+R+L PKQ+AREAEREKLGLISKDRQ E+
Sbjct: 106 EPTPGAPTGSREK--QERERLYDQCLNAPTPLRFLKPKQRAREAEREKLGLISKDRQIEL 163

Query: 373 DSLXXXXXXXXXXXXXXXXXXXXXXDLISLGLVDKEKIPKYELTVEDGRRLAKEYSRVLM 552
           D +                      D I+LGLVD EK+PKYELT EDG +LAKEYSRVLM
Sbjct: 164 D-MMKKKNAKFRVFEKPTIMGTPGLDYITLGLVDAEKLPKYELTKEDGMKLAKEYSRVLM 222

Query: 553 RRH 561
           R+H
Sbjct: 223 RKH 225


>gb|ADN34170.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 247

 Score =  128 bits (322), Expect = 5e-28
 Identities = 85/178 (47%), Positives = 99/178 (55%), Gaps = 3/178 (1%)
 Frame = +1

Query: 37  MIRL-KPKPLISTIQTLNHQLLQRCSVSXXXXXXXXXXX--PLKRSIIXXXXXXXXXXXX 207
           MIR  K K L     +  HQLLQRC VS             PLKRS I            
Sbjct: 1   MIRFTKFKSLSLYADSSAHQLLQRCWVSGTAKGKSKIKAGQPLKRSKITVKKGGAASKGG 60

Query: 208 XXXXXXNEATEHLNKMVDSCLNAPTPIRYLTPKQKAREAEREKLGLISKDRQREIDSLXX 387
                   + E   K+ D CLNAPTP+R+L  K++ REAEREKLGL+SK+RQREI+ +  
Sbjct: 61  DSGGGKKISPEE-EKLYDQCLNAPTPLRFLKAKEREREAEREKLGLMSKERQREIEMMKM 119

Query: 388 XXXXXXXXXXXXXXXXXXXXDLISLGLVDKEKIPKYELTVEDGRRLAKEYSRVLMRRH 561
                               DLISLG+VD +KIPKYELTVEDGRRLAKEYSRVLMR+H
Sbjct: 120 DKSKLGISDSPSIIGTPGL-DLISLGVVDADKIPKYELTVEDGRRLAKEYSRVLMRQH 176


Top