BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024454
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Popul...   217   4e-54
ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Popu...   217   4e-54
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   214   2e-53
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote...   210   5e-52
emb|CBI20795.3| unnamed protein product [Vitis vinifera]              210   5e-52

>gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
           tremuloides]
          Length = 1035

 Score =  217 bits (552), Expect = 4e-54
 Identities = 110/208 (52%), Positives = 145/208 (69%), Gaps = 7/208 (3%)
 Frame = +1

Query: 376 SLSNMEAVKSLLSTSNLQSNE-------VVDAMEAHFTDLCKNVLLLDEGTHRRAMVLFS 534
           +L NME  K+ + T++  SN+         DA+E  F+D CK+ L LDE T  +A+ LF 
Sbjct: 5   ALKNMEENKTTVMTTSHSSNDGGETVKGYSDAVEVRFSDFCKSGLALDENTCTQAIKLFK 64

Query: 535 ESKHLIVANMSAIGTGTPEEAQRFWFAFILYSVKRLTVVKMTKANVESSQSRFDLCQILR 714
           ++KHL++ N+S+IG GT EEA+RFWFAF+ YSVKRL+      A  +S      LCQILR
Sbjct: 65  DTKHLLMTNVSSIGNGTSEEAERFWFAFVSYSVKRLSEKNRDDAQQKSDDPGLTLCQILR 124

Query: 715 ATKLNIVDFFKEFPQFILRVGPILRILYGTDWEQRLEAMEMQANFVHLSVLSKYYRCAFQ 894
             KLNIVDFFKE P FI++ GPIL  +YG DWE RLEA E+QANFVHLS+LS++Y+ A +
Sbjct: 125 LAKLNIVDFFKELPHFIVKAGPILSNIYGADWENRLEAKELQANFVHLSILSRHYKRACR 184

Query: 895 EFFSTNDANSDKQLAVSTTAEHVLDYYR 978
           E F T+DA+SDKQ A+S  A HV D++R
Sbjct: 185 ELFLTSDASSDKQPAISNEATHVSDHHR 212


>ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
           gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName:
           Full=Retinoblastoma-related protein
           gi|222844988|gb|EEE82535.1| hypothetical protein
           POPTRDRAFT_547794 [Populus trichocarpa]
          Length = 1035

 Score =  217 bits (552), Expect = 4e-54
 Identities = 110/208 (52%), Positives = 145/208 (69%), Gaps = 7/208 (3%)
 Frame = +1

Query: 376 SLSNMEAVKSLLSTSNLQSNE-------VVDAMEAHFTDLCKNVLLLDEGTHRRAMVLFS 534
           +L NME  K+ + T++  SN+         DA+E  F+D CK+ L LDE T  +A+ LF 
Sbjct: 5   ALKNMEENKTTVMTTSHSSNDGGETVKGYSDAVEVRFSDFCKSGLALDENTCTQAIKLFK 64

Query: 535 ESKHLIVANMSAIGTGTPEEAQRFWFAFILYSVKRLTVVKMTKANVESSQSRFDLCQILR 714
           ++KHL++ N+S+IG GT EEA+RFWFAF+ YSVKRL+      A  +S      LCQILR
Sbjct: 65  DTKHLLMTNVSSIGNGTSEEAERFWFAFVSYSVKRLSEKNRDDAQQKSDDPGLTLCQILR 124

Query: 715 ATKLNIVDFFKEFPQFILRVGPILRILYGTDWEQRLEAMEMQANFVHLSVLSKYYRCAFQ 894
             KLNIVDFFKE P FI++ GPIL  +YG DWE RLEA E+QANFVHLS+LS++Y+ A +
Sbjct: 125 LAKLNIVDFFKELPHFIVKAGPILSNIYGADWENRLEAKELQANFVHLSILSRHYKRACR 184

Query: 895 EFFSTNDANSDKQLAVSTTAEHVLDYYR 978
           E F T+DA+SDKQ A+S  A HV D++R
Sbjct: 185 ELFLTSDASSDKQPAISNEATHVSDHHR 212


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score =  214 bits (546), Expect = 2e-53
 Identities = 108/184 (58%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
 Frame = +1

Query: 430 SNEVVDAMEAHFTDLCKNVLLLDEGTHRRAMVLFSESKHLI-VANMSAIGTGTPEEAQRF 606
           S E   A+EA FT+ CKN L LDE T  +AM LF ES HL+   ++SAIG G PE+++R+
Sbjct: 9   SAEQGGAVEARFTEFCKNGLQLDESTFAQAMKLFEESNHLLSTTSLSAIGNGVPEDSERY 68

Query: 607 WFAFILYSVKRLTVVKMTKANVESSQSRFDLCQILRATKLNIVDFFKEFPQFILRVGPIL 786
           WFAFILYSVKRL+          + ++ F+LCQILR +KLNIVDFFKE PQFI++VGPIL
Sbjct: 69  WFAFILYSVKRLSEGTAENVQQGNDENGFNLCQILRVSKLNIVDFFKELPQFIVKVGPIL 128

Query: 787 RILYGTDWEQRLEAMEMQANFVHLSVLSKYYRCAFQEFFSTNDANSDKQLAVSTTAEHVL 966
             LYG DWE+RLEA E+QANFVHLS+LSKYY+ A+ EFFST+ +N DKQ +V + + +V 
Sbjct: 129 GNLYGPDWEKRLEAKELQANFVHLSILSKYYKRAYLEFFSTSGSNLDKQSSVISASGYVS 188

Query: 967 DYYR 978
           DY+R
Sbjct: 189 DYHR 192


>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
           gi|89111303|dbj|BAE80326.1| retinoblastoma related
           protein [Camellia sinensis]
          Length = 1025

 Score =  210 bits (534), Expect = 5e-52
 Identities = 103/177 (58%), Positives = 130/177 (73%)
 Frame = +1

Query: 448 AMEAHFTDLCKNVLLLDEGTHRRAMVLFSESKHLIVANMSAIGTGTPEEAQRFWFAFILY 627
           +++A F   CK  L L+E T+  AM LFSESKHL+   +SAIGTGTPEEA+R+WFAF+LY
Sbjct: 26  SLDARFAYFCKTGLSLNENTYTEAMKLFSESKHLLSTTISAIGTGTPEEAERYWFAFVLY 85

Query: 628 SVKRLTVVKMTKANVESSQSRFDLCQILRATKLNIVDFFKEFPQFILRVGPILRILYGTD 807
           SVKRL+      ++  +    F LCQILR  KLNIVDFFKE PQFI++ GPIL   YGTD
Sbjct: 86  SVKRLSEANADDSSQGTGGDGFTLCQILRVAKLNIVDFFKELPQFIVKAGPILSNQYGTD 145

Query: 808 WEQRLEAMEMQANFVHLSVLSKYYRCAFQEFFSTNDANSDKQLAVSTTAEHVLDYYR 978
           WE+RLEA E+QANFVHLS+LSKYY+ AF+EFF T+DA   +Q   +  + +V DY+R
Sbjct: 146 WEKRLEAKELQANFVHLSLLSKYYKRAFREFFLTSDAKVGEQSTAAIASGYVSDYHR 202


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  210 bits (534), Expect = 5e-52
 Identities = 108/184 (58%), Positives = 138/184 (75%), Gaps = 1/184 (0%)
 Frame = +1

Query: 430 SNEVVDAMEAHFTDLCKNVLLLDEGTHRRAMVLFSESKHLI-VANMSAIGTGTPEEAQRF 606
           S E   A+EA FT+ CKN L LDE T  +AM LF ES HL+   ++SAIG G PE+++R+
Sbjct: 9   SAEQGGAVEARFTEFCKNGLQLDESTFAQAMKLFEESNHLLSTTSLSAIGNG-PEDSERY 67

Query: 607 WFAFILYSVKRLTVVKMTKANVESSQSRFDLCQILRATKLNIVDFFKEFPQFILRVGPIL 786
           WFAFILYSVKRL+          + ++ F+LCQILR +KLNIVDFFKE PQFI++VGPIL
Sbjct: 68  WFAFILYSVKRLSEGTAENVQQGNDENGFNLCQILRVSKLNIVDFFKELPQFIVKVGPIL 127

Query: 787 RILYGTDWEQRLEAMEMQANFVHLSVLSKYYRCAFQEFFSTNDANSDKQLAVSTTAEHVL 966
             LYG DWE+RLEA E+QANFVHLS+LSKYY+ A+ EFFST+ +N DKQ +V + + +V 
Sbjct: 128 GNLYGPDWEKRLEAKELQANFVHLSILSKYYKRAYLEFFSTSGSNLDKQSSVISASGYVS 187

Query: 967 DYYR 978
           DY+R
Sbjct: 188 DYHR 191