BLASTX nr result

ID: Cimicifuga21_contig00024448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024448
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331411.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
gb|ACJ84945.1| unknown [Medicago truncatula]                          137   9e-31
ref|XP_003606834.1| Arginine decarboxylase [Medicago truncatula]...   137   9e-31
ref|XP_003606835.1| Arginine decarboxylase [Medicago truncatula]...   135   3e-30
ref|XP_003606837.1| Arginine decarboxylase [Medicago truncatula]...   135   4e-30

>ref|XP_002331411.1| predicted protein [Populus trichocarpa] gi|222873625|gb|EEF10756.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/95 (72%), Positives = 79/95 (83%)
 Frame = +2

Query: 2   EKAEVVEHAPFTDIAISLNPREAFFAKKRSVSIKESPGEICGELICPYPPGIPVLFPGEI 181
           ++ E  EHAPF DI ISLNPR+AFFA KRSVS++ES G++CGELICPYPPGIPV+ PGEI
Sbjct: 390 KRVESREHAPFNDICISLNPRDAFFANKRSVSVRESLGKVCGELICPYPPGIPVMIPGEI 449

Query: 182 ITEGALKYLLDVRNKGAEIVGASDPLLSSIVVCRV 286
           ITE AL YLLDVR KGA + GASD  LSSIV+C V
Sbjct: 450 ITERALNYLLDVRRKGAVVTGASDSHLSSIVICDV 484


>gb|ACJ84945.1| unknown [Medicago truncatula]
          Length = 257

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/91 (72%), Positives = 75/91 (82%)
 Frame = +2

Query: 14  VVEHAPFTDIAISLNPREAFFAKKRSVSIKESPGEICGELICPYPPGIPVLFPGEIITEG 193
           + EH PF DI  SL PR+AFFA KR V+IKES G++ GELICPYPPGIPVL PGE+ITE 
Sbjct: 160 LTEHTPFDDIITSLTPRDAFFASKRKVTIKESIGKVSGELICPYPPGIPVLIPGEVITER 219

Query: 194 ALKYLLDVRNKGAEIVGASDPLLSSIVVCRV 286
           A+ YLL VR+KGA+I GASDPLLSSIVVC V
Sbjct: 220 AVNYLLHVRSKGADISGASDPLLSSIVVCNV 250


>ref|XP_003606834.1| Arginine decarboxylase [Medicago truncatula]
           gi|355507889|gb|AES89031.1| Arginine decarboxylase
           [Medicago truncatula]
          Length = 577

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/91 (72%), Positives = 75/91 (82%)
 Frame = +2

Query: 14  VVEHAPFTDIAISLNPREAFFAKKRSVSIKESPGEICGELICPYPPGIPVLFPGEIITEG 193
           + EH PF DI  SL PR+AFFA KR V+IKES G++ GELICPYPPGIPVL PGE+ITE 
Sbjct: 480 LTEHTPFDDIITSLTPRDAFFASKRKVTIKESIGKVSGELICPYPPGIPVLIPGEVITER 539

Query: 194 ALKYLLDVRNKGAEIVGASDPLLSSIVVCRV 286
           A+ YLL VR+KGA+I GASDPLLSSIVVC V
Sbjct: 540 AVNYLLHVRSKGADISGASDPLLSSIVVCNV 570


>ref|XP_003606835.1| Arginine decarboxylase [Medicago truncatula]
           gi|355507890|gb|AES89032.1| Arginine decarboxylase
           [Medicago truncatula]
          Length = 815

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/91 (70%), Positives = 76/91 (83%)
 Frame = +2

Query: 14  VVEHAPFTDIAISLNPREAFFAKKRSVSIKESPGEICGELICPYPPGIPVLFPGEIITEG 193
           + +HAPF DI +SL PR+AFFA KR V +KES G++ GELICPYPPGIPVL PGE+ITE 
Sbjct: 503 LTDHAPFDDIIMSLTPRDAFFASKRKVMVKESIGKVSGELICPYPPGIPVLIPGEVITEK 562

Query: 194 ALKYLLDVRNKGAEIVGASDPLLSSIVVCRV 286
           A+ YLL VR++GA+I GASDPLLSSIVVC V
Sbjct: 563 AVDYLLHVRSEGADISGASDPLLSSIVVCNV 593


>ref|XP_003606837.1| Arginine decarboxylase [Medicago truncatula]
           gi|355507892|gb|AES89034.1| Arginine decarboxylase
           [Medicago truncatula]
          Length = 526

 Score =  135 bits (339), Expect = 4e-30
 Identities = 63/91 (69%), Positives = 76/91 (83%)
 Frame = +2

Query: 14  VVEHAPFTDIAISLNPREAFFAKKRSVSIKESPGEICGELICPYPPGIPVLFPGEIITEG 193
           + +HAPF DI +SL PR+AFFA KR V +KES G++ GEL+CPYPPGIPVL PGE+ITE 
Sbjct: 436 LTDHAPFDDIIMSLTPRDAFFASKRKVMVKESIGKVSGELVCPYPPGIPVLIPGEVITEK 495

Query: 194 ALKYLLDVRNKGAEIVGASDPLLSSIVVCRV 286
           A+ YLL VR++GA+I GASDPLLSSIVVC V
Sbjct: 496 AVDYLLHVRSEGADISGASDPLLSSIVVCNV 526


Top