BLASTX nr result

ID: Cimicifuga21_contig00024423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024423
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280934.2| PREDICTED: uncharacterized protein LOC100242...   110   9e-23
ref|XP_002514295.1| raspberry3, putative [Ricinus communis] gi|2...   103   1e-20
ref|XP_003533390.1| PREDICTED: uncharacterized protein LOC100777...    99   4e-19
ref|XP_004151568.1| PREDICTED: uncharacterized protein LOC101213...    96   4e-18
ref|XP_002324421.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18

>ref|XP_002280934.2| PREDICTED: uncharacterized protein LOC100242283 [Vitis vinifera]
           gi|297738821|emb|CBI28066.3| unnamed protein product
           [Vitis vinifera]
          Length = 707

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 6/101 (5%)
 Frame = +1

Query: 1   LSRGQVSQEH------ISREVDNSTEKKTSCSEYTRLSAYRALQALKFIPLAARRGVPVL 162
           LS+ Q  + H      ++  ++  +EK   CS++ RLSA RAL +LK IP+AARR +PVL
Sbjct: 607 LSKHQNLENHEKERVILASAMEQISEKTILCSDFARLSAERALHSLKSIPVAARRSLPVL 666

Query: 163 VNSQGLLLSIPSISFKHCPCVSASAAFKPRVPIGGGHTSFI 285
           +NS GLLLSIPSI F+HCP +  SA FKPRVP+GGGH+SF+
Sbjct: 667 INSHGLLLSIPSICFRHCPYLMVSAVFKPRVPLGGGHSSFL 707


>ref|XP_002514295.1| raspberry3, putative [Ricinus communis] gi|223546751|gb|EEF48249.1|
           raspberry3, putative [Ricinus communis]
          Length = 679

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/82 (60%), Positives = 62/82 (75%)
 Frame = +1

Query: 40  EVDNSTEKKTSCSEYTRLSAYRALQALKFIPLAARRGVPVLVNSQGLLLSIPSISFKHCP 219
           E++ + EK     EY R SA RAL ALK IP+AAR+ +PVLVN QG LLSIPSI FK CP
Sbjct: 598 EMEQTMEKSNLYLEYLRFSAERALTALKSIPIAARKSLPVLVNHQGHLLSIPSIGFKTCP 657

Query: 220 CVSASAAFKPRVPIGGGHTSFI 285
           C++ S  FKPRVP+GGG++SF+
Sbjct: 658 CLAVSCEFKPRVPLGGGYSSFL 679


>ref|XP_003533390.1| PREDICTED: uncharacterized protein LOC100777173 [Glycine max]
          Length = 705

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/101 (52%), Positives = 71/101 (70%), Gaps = 6/101 (5%)
 Frame = +1

Query: 1   LSRGQVSQEHISREVD--NSTEK---KTS-CSEYTRLSAYRALQALKFIPLAARRGVPVL 162
           LS+  +S+     EV+  N TE+   +TS C  Y  +SA +AL+ LK IP+AARR +PVL
Sbjct: 605 LSKYPLSKNFPQYEVESVNGTERIMDRTSLCLHYASVSAKQALRLLKSIPVAARRSLPVL 664

Query: 163 VNSQGLLLSIPSISFKHCPCVSASAAFKPRVPIGGGHTSFI 285
           +N QG LLSIPS++FKHCP +     FKP++P+GGGHTSFI
Sbjct: 665 INQQGQLLSIPSVNFKHCPFLMVHMEFKPKIPLGGGHTSFI 705


>ref|XP_004151568.1| PREDICTED: uncharacterized protein LOC101213951 [Cucumis sativus]
           gi|449531852|ref|XP_004172899.1| PREDICTED:
           uncharacterized LOC101213951 [Cucumis sativus]
          Length = 435

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/76 (63%), Positives = 53/76 (69%)
 Frame = +1

Query: 58  EKKTSCSEYTRLSAYRALQALKFIPLAARRGVPVLVNSQGLLLSIPSISFKHCPCVSASA 237
           E    C    R SA  AL  LK IP+AARR +PVLVN QGLLLSIPSI F HCP + ASA
Sbjct: 360 ESTNRCLNSARSSAREALVLLKLIPVAARRSLPVLVNHQGLLLSIPSIRFSHCPWLVASA 419

Query: 238 AFKPRVPIGGGHTSFI 285
            FKP VP GGGH+SF+
Sbjct: 420 EFKPMVPFGGGHSSFL 435


>ref|XP_002324421.1| predicted protein [Populus trichocarpa] gi|222865855|gb|EEF02986.1|
           predicted protein [Populus trichocarpa]
          Length = 461

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/64 (68%), Positives = 52/64 (81%)
 Frame = +1

Query: 94  SAYRALQALKFIPLAARRGVPVLVNSQGLLLSIPSISFKHCPCVSASAAFKPRVPIGGGH 273
           S  +AL+ LK IP+AARR +PVLVN QGLLLSIPSI FKHCPC+  S  FKP VP+GGGH
Sbjct: 398 STQKALEVLKSIPVAARRSLPVLVNHQGLLLSIPSIGFKHCPCLMVSCEFKPIVPLGGGH 457

Query: 274 TSFI 285
           +SF+
Sbjct: 458 SSFM 461


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