BLASTX nr result

ID: Cimicifuga21_contig00024408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024408
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273651.1| PREDICTED: uncharacterized protein LOC100262...   162   3e-38
ref|XP_002323802.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_004142788.1| PREDICTED: uncharacterized protein LOC101221...   146   2e-33
ref|NP_001235995.1| uncharacterized protein LOC100305736 [Glycin...   141   6e-32
ref|XP_002298542.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_002273651.1| PREDICTED: uncharacterized protein LOC100262706 [Vitis vinifera]
           gi|296087605|emb|CBI34861.3| unnamed protein product
           [Vitis vinifera]
          Length = 110

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/100 (77%), Positives = 87/100 (87%)
 Frame = -1

Query: 439 MAMACNLATFQKSQGLQVFCRKKEXXXXXXXDPYKVIEITPPPKNLGIRCFPPNIQCGEN 260
           MAMA NL  +QKS+GLQ+FCRKK+        PYKVIEITPPPKNLG+RCFP N+QCGE+
Sbjct: 1   MAMASNLPAYQKSRGLQIFCRKKDRERDHH--PYKVIEITPPPKNLGVRCFPSNLQCGES 58

Query: 259 VTIEGQTYTVSSVTYRYQLRKGKYEPSEKRLDVLSTGRYI 140
           VTIEGQ YT+S+VT+RYQLRKGKYEPSEKRLDVLSTGRYI
Sbjct: 59  VTIEGQAYTISAVTHRYQLRKGKYEPSEKRLDVLSTGRYI 98


>ref|XP_002323802.1| predicted protein [Populus trichocarpa] gi|222866804|gb|EEF03935.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/101 (73%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
 Frame = -1

Query: 439 MAMAC-NLATFQKSQGLQVFCRKKEXXXXXXXDPYKVIEITPPPKNLGIRCFPPNIQCGE 263
           M MA  N+  +QK+  L V CRKKE        PYKVIE+TPPPKNLGIRCFPPN+QCGE
Sbjct: 1   MTMASWNVGAYQKTPALDVTCRKKERDRDRSY-PYKVIEVTPPPKNLGIRCFPPNLQCGE 59

Query: 262 NVTIEGQTYTVSSVTYRYQLRKGKYEPSEKRLDVLSTGRYI 140
           +VTIEGQ YT+SSVT+RYQLR+GKYEPSEKRLDVLSTGRYI
Sbjct: 60  SVTIEGQAYTISSVTHRYQLRRGKYEPSEKRLDVLSTGRYI 100


>ref|XP_004142788.1| PREDICTED: uncharacterized protein LOC101221627 [Cucumis sativus]
           gi|449522638|ref|XP_004168333.1| PREDICTED:
           uncharacterized LOC101221627 [Cucumis sativus]
          Length = 115

 Score =  146 bits (369), Expect = 2e-33
 Identities = 77/104 (74%), Positives = 84/104 (80%), Gaps = 4/104 (3%)
 Frame = -1

Query: 439 MAMAC---NLATFQKSQG-LQVFCRKKEXXXXXXXDPYKVIEITPPPKNLGIRCFPPNIQ 272
           MAMA     LA   K+QG  Q+ CR+KE        PYKVIEITPPPKNLGIRCFPPN+Q
Sbjct: 1   MAMASFNLPLAPRHKTQGRFQISCRRKEKERNNFD-PYKVIEITPPPKNLGIRCFPPNLQ 59

Query: 271 CGENVTIEGQTYTVSSVTYRYQLRKGKYEPSEKRLDVLSTGRYI 140
           CGE+VTIEGQTYT+S+VT RYQLRKGKYEPSEKRLDVLSTGRYI
Sbjct: 60  CGESVTIEGQTYTISAVTLRYQLRKGKYEPSEKRLDVLSTGRYI 103


>ref|NP_001235995.1| uncharacterized protein LOC100305736 [Glycine max]
           gi|255626475|gb|ACU13582.1| unknown [Glycine max]
          Length = 115

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/95 (68%), Positives = 77/95 (81%), Gaps = 2/95 (2%)
 Frame = -1

Query: 418 ATFQKSQGLQVFCRKKEXXXXXXXD--PYKVIEITPPPKNLGIRCFPPNIQCGENVTIEG 245
           A+FQK+   +V C +K           PYKV+EITPPPK+LG+RC PPN+QCGENVTIEG
Sbjct: 9   ASFQKTMSFEVSCNRKRDRDRERGSILPYKVVEITPPPKSLGVRCLPPNLQCGENVTIEG 68

Query: 244 QTYTVSSVTYRYQLRKGKYEPSEKRLDVLSTGRYI 140
           Q YT+S+VT+RYQLRKGKYEPSEKRLDVLSTGRY+
Sbjct: 69  QAYTISAVTHRYQLRKGKYEPSEKRLDVLSTGRYL 103


>ref|XP_002298542.1| predicted protein [Populus trichocarpa] gi|222845800|gb|EEE83347.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/85 (78%), Positives = 73/85 (85%)
 Frame = -1

Query: 394 LQVFCRKKEXXXXXXXDPYKVIEITPPPKNLGIRCFPPNIQCGENVTIEGQTYTVSSVTY 215
           + V CRKKE        PYKVIEITPPPKNLGIRCFP N+QCGE+VTIEGQ YT+S+VT+
Sbjct: 1   VHVTCRKKERDRDHSY-PYKVIEITPPPKNLGIRCFPTNLQCGESVTIEGQAYTISAVTH 59

Query: 214 RYQLRKGKYEPSEKRLDVLSTGRYI 140
           RYQLRKGKYEPSEKRLDVLSTGRYI
Sbjct: 60  RYQLRKGKYEPSEKRLDVLSTGRYI 84


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