BLASTX nr result

ID: Cimicifuga21_contig00024404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024404
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS52645.1| GEM-like 1 [Vitis vinifera]                            365   2e-98
ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]            362   8e-98
ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|2...   360   3e-97
ref|XP_002301081.1| predicted protein [Populus trichocarpa] gi|2...   352   8e-95
ref|XP_003602953.1| GLABRA2 expression modulator [Medicago trunc...   349   9e-94

>gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  365 bits (936), Expect = 2e-98
 Identities = 187/295 (63%), Positives = 224/295 (75%), Gaps = 1/295 (0%)
 Frame = -2

Query: 1051 LSSLREMDRNIDKPDEKTEQSQSSDYAPYPKIDPIDVSPPNKDNSGSFAMESDSLXXXXX 872
            +S  + ++ ++ KP+  ++   S+DYAPYPK+DP DV+PP +D   +    S        
Sbjct: 1    MSQHQGLESHVAKPE--SDYPPSADYAPYPKLDPNDVAPPKED--WTTVTISSQTPHPVS 56

Query: 871  XXXXXXXSELTSEAPSR-SGNLATSMPTESNPYVXXXXXXXXXXXXXXSLTVKNTVATVK 695
                   SE  SE P+  + N AT+MP ESNPY+                ++KN + +VK
Sbjct: 57   QNSGSPISESASEGPAPIARNSATTMPVESNPYISSSPAPAS--------SMKNKMDSVK 108

Query: 694  DVLGKWGKKMGETSKKGQDLAGNVWQHLKTGPSFADAAMGRIAQGTKVLAEGGYEKIFQQ 515
            DVLGKWGKK  E +KK +DLAGN+WQHLKTGPSFADAA+GRIAQGTKVLAEGGYEKIFQQ
Sbjct: 109  DVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFQQ 168

Query: 514  TFDTIPEEKLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVV 335
            TF+T+PEE+LQ++YACYLSTSAGPVMGILY+ST KLAFCSD+PL YKVGEQ EWSYYKVV
Sbjct: 169  TFETVPEEQLQKSYACYLSTSAGPVMGILYLSTEKLAFCSDSPLSYKVGEQTEWSYYKVV 228

Query: 334  IPLHQLKAVNTSTSKVNRSEKYIQVISVDNHEFWFMGFVNYDSAVKYLQEALQAH 170
            IPLHQLKAVNTSTSKVN +EKY+Q+ISVDNHEFWFMGFV+YDSAVK LQ ALQ H
Sbjct: 229  IPLHQLKAVNTSTSKVNPAEKYVQIISVDNHEFWFMGFVHYDSAVKNLQGALQHH 283


>ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  362 bits (930), Expect = 8e-98
 Identities = 186/295 (63%), Positives = 223/295 (75%), Gaps = 1/295 (0%)
 Frame = -2

Query: 1051 LSSLREMDRNIDKPDEKTEQSQSSDYAPYPKIDPIDVSPPNKDNSGSFAMESDSLXXXXX 872
            +S  + ++ ++ KP+  ++   S+DYAPYPK+DP DV+PP +D   +    S        
Sbjct: 1    MSQHQGLESHVAKPE--SDYPPSADYAPYPKLDPNDVAPPKED--WTTVTISSQTPHPVS 56

Query: 871  XXXXXXXSELTSEAPSR-SGNLATSMPTESNPYVXXXXXXXXXXXXXXSLTVKNTVATVK 695
                   SE  SE P+  + N AT+MP ESNPY+                ++KN + +VK
Sbjct: 57   QNSGSPISESASEGPAPIARNSATTMPVESNPYISSSPAPAS--------SMKNKMDSVK 108

Query: 694  DVLGKWGKKMGETSKKGQDLAGNVWQHLKTGPSFADAAMGRIAQGTKVLAEGGYEKIFQQ 515
            DVLGKWGKK  E +KK +DLAGN+WQHLK GPSFADAA+GRIAQGTKVLAEGGYEKIFQQ
Sbjct: 109  DVLGKWGKKAAEATKKAEDLAGNMWQHLKMGPSFADAAVGRIAQGTKVLAEGGYEKIFQQ 168

Query: 514  TFDTIPEEKLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVV 335
            TF+T+PEE+LQ++YACYLSTSAGPVMGILY+ST KLAFCSD+PL YKVGEQ EWSYYKVV
Sbjct: 169  TFETVPEEQLQKSYACYLSTSAGPVMGILYLSTEKLAFCSDSPLSYKVGEQTEWSYYKVV 228

Query: 334  IPLHQLKAVNTSTSKVNRSEKYIQVISVDNHEFWFMGFVNYDSAVKYLQEALQAH 170
            IPLHQLKAVNTSTSKVN +EKY+Q+ISVDNHEFWFMGFV+YDSAVK LQ ALQ H
Sbjct: 229  IPLHQLKAVNTSTSKVNPAEKYVQIISVDNHEFWFMGFVHYDSAVKNLQGALQHH 283


>ref|XP_002307347.1| predicted protein [Populus trichocarpa] gi|222856796|gb|EEE94343.1|
            predicted protein [Populus trichocarpa]
          Length = 294

 Score =  360 bits (925), Expect = 3e-97
 Identities = 185/301 (61%), Positives = 222/301 (73%)
 Frame = -2

Query: 1072 ESEKSRVLSSLREMDRNIDKPDEKTEQSQSSDYAPYPKIDPIDVSPPNKDNSGSFAMESD 893
            +++K    SS  E +++++  D K     ++DYAPYPK+DP DV+PP  DN  + +M S 
Sbjct: 11   QTKKPAPSSSDLESEKHVEVKD-KISDPHTTDYAPYPKLDPQDVAPP-LDNWANVSMGST 68

Query: 892  SLXXXXXXXXXXXXSELTSEAPSRSGNLATSMPTESNPYVXXXXXXXXXXXXXXSLTVKN 713
            +L               T  +P  +G   T+MP +SNPYV                + KN
Sbjct: 69   TLSNPAGA---------TQGSPPIAGTTVTTMPADSNPYVSPAPVAPS--------SSKN 111

Query: 712  TVATVKDVLGKWGKKMGETSKKGQDLAGNVWQHLKTGPSFADAAMGRIAQGTKVLAEGGY 533
             +  VKDVLGKWGKK  E +KK +DLAGN+WQHLKTGPSFADAA+GRIAQGTKVLAEGGY
Sbjct: 112  KMEAVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGY 171

Query: 532  EKIFQQTFDTIPEEKLQRTYACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEW 353
            EKIF+QTF+T+PEE+L +T+ACYLSTSAGPVMG+LY+STAKLAFCSDNPL YK+GEQ EW
Sbjct: 172  EKIFRQTFETVPEEQLVKTFACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYKIGEQTEW 231

Query: 352  SYYKVVIPLHQLKAVNTSTSKVNRSEKYIQVISVDNHEFWFMGFVNYDSAVKYLQEALQA 173
            SYYKVVIPLHQLKAVN STSKV  +EKYIQ+ISVDNHEFWFMGFV YD+AVK LQEALQ 
Sbjct: 232  SYYKVVIPLHQLKAVNPSTSKVKSAEKYIQIISVDNHEFWFMGFVYYDNAVKSLQEALQH 291

Query: 172  H 170
            H
Sbjct: 292  H 292


>ref|XP_002301081.1| predicted protein [Populus trichocarpa] gi|222842807|gb|EEE80354.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  352 bits (904), Expect = 8e-95
 Identities = 181/279 (64%), Positives = 210/279 (75%), Gaps = 3/279 (1%)
 Frame = -2

Query: 1003 KTEQSQSSDYAPYPKIDPIDVSPPNKDNSGSFAMESDSLXXXXXXXXXXXXSELTSEAPS 824
            K   S +SDYAPYPK+DP DV+P + +N  + +  S +                 S+ P 
Sbjct: 33   KNSNSHTSDYAPYPKLDPKDVAP-SPENWANLSTGSTT----------------QSKPPG 75

Query: 823  RS---GNLATSMPTESNPYVXXXXXXXXXXXXXXSLTVKNTVATVKDVLGKWGKKMGETS 653
             S   G  AT+MP ESNPYV                + KNTV  VKDVLGKWGKK  E +
Sbjct: 76   PSPIAGTAATTMPAESNPYVSPGPVAPS--------SSKNTVEAVKDVLGKWGKKAAEAT 127

Query: 652  KKGQDLAGNVWQHLKTGPSFADAAMGRIAQGTKVLAEGGYEKIFQQTFDTIPEEKLQRTY 473
            KK +DLAGN+WQHLKTGPSFADAA+GRIAQGTKVLAEGGYEKIFQQTF+T+PEEKL +T+
Sbjct: 128  KKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEKLVKTF 187

Query: 472  ACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVVIPLHQLKAVNTSTS 293
            ACYLSTSAGPVMG+LY+STAKLAFCSDNPL YKVGEQ++WSYYKVVIPLHQLKAVN STS
Sbjct: 188  ACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYKVGEQSQWSYYKVVIPLHQLKAVNPSTS 247

Query: 292  KVNRSEKYIQVISVDNHEFWFMGFVNYDSAVKYLQEALQ 176
            KVN +EKYIQ+IS DNHEFWFMGFV YD+AV+ LQ+AL+
Sbjct: 248  KVNSAEKYIQIISADNHEFWFMGFVYYDNAVQSLQQALE 286


>ref|XP_003602953.1| GLABRA2 expression modulator [Medicago truncatula]
            gi|355492001|gb|AES73204.1| GLABRA2 expression modulator
            [Medicago truncatula]
          Length = 258

 Score =  349 bits (895), Expect = 9e-94
 Identities = 174/281 (61%), Positives = 206/281 (73%)
 Frame = -2

Query: 1015 KPDEKTEQSQSSDYAPYPKIDPIDVSPPNKDNSGSFAMESDSLXXXXXXXXXXXXSELTS 836
            KP +    S + DYAPYPK+DP DV+PP    +                           
Sbjct: 12   KPQDSDSHSHTPDYAPYPKLDPNDVAPPPPPVA--------------------------- 44

Query: 835  EAPSRSGNLATSMPTESNPYVXXXXXXXXXXXXXXSLTVKNTVATVKDVLGKWGKKMGET 656
               SR+ + AT+MP ESNPYV                + KNT+ +VKDVLGKWGKK  E 
Sbjct: 45   -TESRATDAATTMPAESNPYVSPAPVPAPT-------SAKNTLDSVKDVLGKWGKKAAEA 96

Query: 655  SKKGQDLAGNVWQHLKTGPSFADAAMGRIAQGTKVLAEGGYEKIFQQTFDTIPEEKLQRT 476
            +KK +DLAGN+WQHLKTGPSFADAA+GRIAQGTKVLAEGGYEKIF+QTF+T+PEE+L +T
Sbjct: 97   TKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKT 156

Query: 475  YACYLSTSAGPVMGILYISTAKLAFCSDNPLPYKVGEQNEWSYYKVVIPLHQLKAVNTST 296
            YACYLSTSAGPVMG+LY+STAKLAFCSDNPL Y+ G+Q +WSYYKVVIPLHQL+AVN ST
Sbjct: 157  YACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTGDQTQWSYYKVVIPLHQLRAVNPST 216

Query: 295  SKVNRSEKYIQVISVDNHEFWFMGFVNYDSAVKYLQEALQA 173
            SK N +EK+IQ+ISVDNHEFWFMGFV YDSAVK++QEALQ+
Sbjct: 217  SKANPTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQEALQS 257


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