BLASTX nr result
ID: Cimicifuga21_contig00024359
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00024359
(1069 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi... 347 4e-93
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi... 340 5e-91
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,... 339 6e-91
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi... 336 5e-90
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2... 332 7e-89
>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 347 bits (889), Expect = 4e-93
Identities = 177/360 (49%), Positives = 241/360 (66%), Gaps = 40/360 (11%)
Frame = -1
Query: 976 KFKDTLSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHNAVTYNGVLRVLGQQKSIKE 797
+ K++ S+N +L + REL PL+AL FF WV GY H+++TYN + RVLG+ SI E
Sbjct: 224 ELKNSFSDNFVLHVLRELRGYPLKALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIGE 283
Query: 796 FWCLVKEMKNAGHDIDMDTYIELSKEFQQESMLKDAVKLYELMMKSPYKPLIGNCFSLLR 617
FW +V+EMK+ GH++D+DTYI++S++FQ+ ML+DAVKLYE+MM PYKP + +C LLR
Sbjct: 284 FWSMVEEMKSKGHEMDIDTYIKISRQFQKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLR 343
Query: 616 ELSKPDSPDVDLLFRVFDKCEAMGYTFSKAIYRRIYMSFTSAGRFDETQRVLETMSNKGF 437
+S +PD+ L+FRV +K EA+G + KA+Y I+ S TS GRFDE +++E+M + G
Sbjct: 344 SISLSSNPDLALVFRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGC 403
Query: 436 ELDNSSYSHLVFGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHCMAGEIDQALK 257
E DN +YS LV+GLCKAR+L+EACK+LD ME GCVPDI TWTILIQGHC A E+D+AL
Sbjct: 404 EPDNITYSQLVYGLCKARKLEEACKLLDEMEACGCVPDIKTWTILIQGHCAAKEVDKALI 463
Query: 256 CYSKMLEKNIIADADLFKV----------------------------------------L 197
C++KM+EKN ADADL +V L
Sbjct: 464 CFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHLVPWQATYKLMINKL 523
Query: 196 LGETKLKEAMNLLRSVMQNHNLSPCPKQFIDFMSKHRTVDDALKFLKAMSLKEYPSSSAY 17
LG KL+EA+NLL +M+ N P P+ FI+++SK TV+DA +FL A+S K+YPS SAY
Sbjct: 524 LGVRKLEEAINLLH-LMKKQNYPPFPEPFIEYISKFGTVEDAGEFLNALSAKKYPSQSAY 582
Score = 81.3 bits (199), Expect = 4e-13
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 38/291 (13%)
Frame = -1
Query: 1018 ILESLRDDDMNDIL-----KFKDTLSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHN 854
I+E + ++D +D L K L+ T++ + ++L DP + +FF+WV G+ +
Sbjct: 68 IVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWVTEKNGFRPS 127
Query: 853 AVTYNGVLRVLGQQKSIKEFWCLVKEMKNAGHDIDMDTYIELSKEFQQESMLKDAV---- 686
+ Y+ +LR L +S+K+FW +++MK G ID +TY+ + F++ M + V
Sbjct: 128 SAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMASEEVALTH 187
Query: 685 ----------------KLYELMMKSPY-----KPL--IGNCFS------LLRELSKPDSP 593
K+ EL+ S + K L + N FS +LREL
Sbjct: 188 FYNRMVQENAMDEVVKKVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLRELRGYPLK 247
Query: 592 DVDLLFRVFDKCEAMGYTFSKAIYRRIYMSFTSAGRFDETQRVLETMSNKGFELDNSSYS 413
+ F+ +C GY S Y I E ++E M +KG E+D +Y
Sbjct: 248 AL-RFFQWVGECP--GYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMDIDTYI 304
Query: 412 HLVFGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHCMAGEIDQAL 260
+ K + L++A K+ + M + P + T+L++ ++ D AL
Sbjct: 305 KISRQFQKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLAL 355
>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 340 bits (871), Expect = 5e-91
Identities = 175/355 (49%), Positives = 233/355 (65%), Gaps = 40/355 (11%)
Frame = -1
Query: 961 LSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHNAVTYNGVLRVLGQQKSIKEFWCLV 782
LS+N ++R+ +EL PL+ALSFFHWV Y HN V+YN + RVLG+ SI+ FW ++
Sbjct: 222 LSDNFVIRVLKELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVI 281
Query: 781 KEMKNAGHDIDMDTYIELSKEFQQESMLKDAVKLYELMMKSPYKPLIGNCFSLLRELSKP 602
+EMK+A H+ID+DTYI++S++FQ+ M+ +AVKLYELMM PYKP + +C LLR ++
Sbjct: 282 EEMKHANHEIDIDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAAS 341
Query: 601 DSPDVDLLFRVFDKCEAMGYTFSKAIYRRIYMSFTSAGRFDETQRVLETMSNKGFELDNS 422
D+PD+ L++RV K EA GY+ SKA+Y I+ S TS G+FD+ + ++++M N G+E DN
Sbjct: 342 DNPDLSLVYRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNV 401
Query: 421 SYSHLVFGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHCMAGEIDQALKCYSKM 242
+YS LVFGLCKARRL+EA KVLD ME QGC+PDI TWTILIQGHC A E+D AL C++KM
Sbjct: 402 TYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKM 461
Query: 241 LEKNIIADADLFKV----------------------------------------LLGETK 182
+EKN DADL V LL K
Sbjct: 462 IEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRK 521
Query: 181 LKEAMNLLRSVMQNHNLSPCPKQFIDFMSKHRTVDDALKFLKAMSLKEYPSSSAY 17
L+EA+ LLR +M+ N P P+ F+ ++SK TV DA FLK +S KEYPS SAY
Sbjct: 522 LEEAIALLR-LMKKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAY 575
>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 627
Score = 339 bits (870), Expect = 6e-91
Identities = 171/360 (47%), Positives = 237/360 (65%), Gaps = 40/360 (11%)
Frame = -1
Query: 961 LSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHNAVTYNGVLRVLGQQKSIKEFWCLV 782
L++N ++R+ +EL PL+AL FF+W + Y N +TYN + RVLG+ SI EFW +V
Sbjct: 227 LTDNFVIRVLKELRNYPLKALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVV 286
Query: 781 KEMKNAGHDIDMDTYIELSKEFQQESMLKDAVKLYELMMKSPYKPLIGNCFSLLRELSKP 602
+EMKNAGH++D+DTYI++S++FQ+ ++ DAVKLYE MM P+KP + +C LLR +S
Sbjct: 287 EEMKNAGHEMDIDTYIKISRQFQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISAS 346
Query: 601 DSPDVDLLFRVFDKCEAMGYTFSKAIYRRIYMSFTSAGRFDETQRVLETMSNKGFELDNS 422
+ PD++L+FRV +K EA G + SKA+Y I+ S TS G FDE ++++ M G+E DN
Sbjct: 347 NYPDLNLVFRVVNKYEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEPDNI 406
Query: 421 SYSHLVFGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHCMAGEIDQALKCYSKM 242
+YS LVFGLCKARRL+EAC+VLD ME GC+PDI TWTILIQGHC+A E+ +AL C +KM
Sbjct: 407 TYSQLVFGLCKARRLEEACEVLDEMEAHGCLPDIKTWTILIQGHCVANEVGKALMCLAKM 466
Query: 241 LEKNIIADADLFKVLLGE----------------------------------------TK 182
+EK+ DADL VL+ K
Sbjct: 467 MEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVRK 526
Query: 181 LKEAMNLLRSVMQNHNLSPCPKQFIDFMSKHRTVDDALKFLKAMSLKEYPSSSAYDDLIQ 2
L+EA+NLLR +M+ HN P P+ F+ ++S+ TVDDA FLKA+S+KEYPS+SAY ++ Q
Sbjct: 527 LEEALNLLR-LMKQHNHPPFPEPFVQYISRFGTVDDAADFLKALSVKEYPSTSAYLNVFQ 585
Score = 70.5 bits (171), Expect = 7e-10
Identities = 70/337 (20%), Positives = 147/337 (43%), Gaps = 18/337 (5%)
Frame = -1
Query: 961 LSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHNAVTYNGVLRVLGQQKSIKEFWCLV 782
L+ T++ + ++L DP +A FF+WV G+ ++ Y+ +LR+L ++ S+K FW +
Sbjct: 90 LTHETVIYVLKKLDKDPHKAWDFFNWVCDRNGFKPSSPLYSLMLRILVKKDSMKNFWITL 149
Query: 781 KEMKNAGHDIDMDTYIELSKEFQQESMLKDAVKLY----ELMMKSPYKPLIGNCFSLLRE 614
++MK G D +TY+ + F++E M DAV ++ ++ ++ N S++
Sbjct: 150 RKMKEQGFYTDEETYLTILGVFRKERMDSDAVAFKHFFDRMVEENAMDSVVKNVVSVVSA 209
Query: 613 LSKPDSPDVDLLFRVFDKCEAMGYTFSKAIYRRIYMSFTSAGRFDETQRVLETMSNKG-- 440
+ + +L E MG + R+ + + L+ + G
Sbjct: 210 TEWSNEVEKEL--------EGMGILLTDNFVIRVLKELR-----NYPLKALQFFNWAGKC 256
Query: 439 --FELDNSSYSHLVFGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHCMAGEIDQ 266
+E + +Y+ + L + + E V++ M+ G DI+T+ + + +
Sbjct: 257 ERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMDIDTYIKISRQFQKNKLMGD 316
Query: 265 ALKCYSKMLE---KNIIADADLFKVLLGETKLKEAMNLLRSVMQNHNLSPCPKQFIDFMS 95
A+K Y M++ K + D + + + + +NL+ V+ + + +
Sbjct: 317 AVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPD-LNLVFRVVNKYEATGNSLSKAVYDG 375
Query: 94 KHRTV------DDALKFLKAMSLKEY-PSSSAYDDLI 5
HR++ D+A K +K M Y P + Y L+
Sbjct: 376 IHRSLTSIGNFDEAAKMMKCMQTAGYEPDNITYSQLV 412
>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 336 bits (862), Expect = 5e-90
Identities = 169/368 (45%), Positives = 235/368 (63%), Gaps = 40/368 (10%)
Frame = -1
Query: 1000 DDDMNDILKFKDTLSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHNAVTYNGVLRVL 821
D+ + ++ K + LS+N ++R+ +EL PL+A FFHWV + GY H+ VTYN V RVL
Sbjct: 215 DEVVGELAKLEIQLSDNFVIRVLKELRKTPLKAYKFFHWVGKQSGYEHDTVTYNAVARVL 274
Query: 820 GQQKSIKEFWCLVKEMKNAGHDIDMDTYIELSKEFQQESMLKDAVKLYELMMKSPYKPLI 641
+ +SI+EFW +++EMK GH++D+DTYI+++++ Q+ M++DAVKLYELMM KPL+
Sbjct: 275 PRAESIEEFWSVIEEMKRVGHELDIDTYIKITRQLQRNRMMEDAVKLYELMMDGSCKPLV 334
Query: 640 GNCFSLLRELSKPDSPDVDLLFRVFDKCEAMGYTFSKAIYRRIYMSFTSAGRFDETQRVL 461
+C LL+ +S D P++DL+FRV K E+ G+T SKAIY I+ S TSAG FDE + ++
Sbjct: 335 QDCNMLLKSISANDKPNLDLVFRVAKKYESTGHTLSKAIYDGIHRSLTSAGNFDEAENIV 394
Query: 460 ETMSNKGFELDNSSYSHLVFGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHCMA 281
TM N G+E DN +YS +VFGLCK RR +EACKVL+ ME C+PDI TWTILIQGHC A
Sbjct: 395 RTMRNAGYEPDNITYSQMVFGLCKMRRFEEACKVLEDMESSRCIPDIKTWTILIQGHCSA 454
Query: 280 GEIDQALKCYSKMLEKNIIADADLFKV--------------------------------- 200
E+D+AL C++KM+EK DADL V
Sbjct: 455 NEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEISRKCRISPWQAT 514
Query: 199 -------LLGETKLKEAMNLLRSVMQNHNLSPCPKQFIDFMSKHRTVDDALKFLKAMSLK 41
LLG K +EA+ LLR +M++HN P F+ ++SK +V+DA FLKA+S+K
Sbjct: 515 YKKLIEKLLGVMKFEEALELLR-LMKSHNYPPYHLPFVPYISKFGSVEDAEAFLKALSVK 573
Query: 40 EYPSSSAY 17
YPS Y
Sbjct: 574 SYPSHIVY 581
Score = 85.9 bits (211), Expect = 2e-14
Identities = 87/386 (22%), Positives = 166/386 (43%), Gaps = 47/386 (12%)
Frame = -1
Query: 1018 ILESLRDDDMNDILKFK-----DTLSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHN 854
I+E L +D + L+ K ++ T+L + + L +P +A FF+WV + + + +
Sbjct: 67 IVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEKASCFFNWVCKKVWFRPS 126
Query: 853 AVTYNGVLRVLGQQKSIKEFWCLVKEMKNAGHDIDMDTYIELSKEFQQESMLKDAVKL-- 680
Y+ ++R+L + ++K+FW ++ MK G +D +TY+ +S F++E M D+V L
Sbjct: 127 CSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREKMDSDSVALTH 186
Query: 679 -YELMM-KSPYKPLIGNCFSLLR----------ELSKPDSPDVD-LLFRVFDKC------ 557
Y M+ ++ + ++ N ++ EL+K + D + RV +
Sbjct: 187 FYNRMLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRVLKELRKTPLK 246
Query: 556 ---------EAMGYTFSKAIYRRIYMSFTSAGRFDETQRVLETMSNKGFELDNSSYSHLV 404
+ GY Y + A +E V+E M G ELD +Y +
Sbjct: 247 AYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHELDIDTYIKIT 306
Query: 403 FGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHC--------MAGEIDQALKCYS 248
L + R +++A K+ + M + C P + +L++ + + + +
Sbjct: 307 RQLQRNRMMEDAVKLYELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVFRVAKKYESTG 366
Query: 247 KMLEKNIIADADLFKVLLGETKLKEAMNLLRSVMQNHNLSP---CPKQFIDFMSKHRTVD 77
L K I + + L EA N++R+ M+N P Q + + K R +
Sbjct: 367 HTLSKAIY--DGIHRSLTSAGNFDEAENIVRT-MRNAGYEPDNITYSQMVFGLCKMRRFE 423
Query: 76 DALKFLKAM-SLKEYPSSSAYDDLIQ 2
+A K L+ M S + P + LIQ
Sbjct: 424 EACKVLEDMESSRCIPDIKTWTILIQ 449
>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
predicted protein [Populus trichocarpa]
Length = 476
Score = 332 bits (852), Expect = 7e-89
Identities = 167/355 (47%), Positives = 234/355 (65%), Gaps = 40/355 (11%)
Frame = -1
Query: 961 LSENTILRIFRELHIDPLQALSFFHWVRRDIGYTHNAVTYNGVLRVLGQQKSIKEFWCLV 782
L++N ++R+ +EL P++AL FF WV R GY HN VTYN ++RVLG+ SI EFW +V
Sbjct: 76 LTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHNTVTYNALVRVLGRDDSIGEFWSVV 135
Query: 781 KEMKNAGHDIDMDTYIELSKEFQQESMLKDAVKLYELMMKSPYKPLIGNCFSLLRELSKP 602
EMKNAG+++D+DTYI++S++FQ+ +++DAV+LYE MM P+KP + +C+ LLR ++
Sbjct: 136 DEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMMDGPFKPSVQDCYILLRSVAAS 195
Query: 601 DSPDVDLLFRVFDKCEAMGYTFSKAIYRRIYMSFTSAGRFDETQRVLETMSNKGFELDNS 422
D+PD+DL+ RV D +A G + SK++Y ++ SFTSAG+FDE +++++ M + G+E DN
Sbjct: 196 DNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNI 255
Query: 421 SYSHLVFGLCKARRLDEACKVLDRMEEQGCVPDINTWTILIQGHCMAGEIDQALKCYSKM 242
+YS LVFGLCK++RL+EACKVLD ME GC+PDI TWTILIQGH A ++D+ L C KM
Sbjct: 256 TYSQLVFGLCKSKRLEEACKVLDEMEAGGCIPDIKTWTILIQGHFAANQVDKGLLCLVKM 315
Query: 241 LEKNIIADADLFKV----------------------------------------LLGETK 182
EKN DADL V LL K
Sbjct: 316 TEKNTDPDADLLDVLVKGFLSQRKMDGAYTFLVEMVNKLRLVPWQATYKLLIEKLLQVRK 375
Query: 181 LKEAMNLLRSVMQNHNLSPCPKQFIDFMSKHRTVDDALKFLKAMSLKEYPSSSAY 17
L+EA +LLR +M+ HN P P+ F ++SK TV+DA+ F K +S+KEYPSS AY
Sbjct: 376 LEEATDLLR-LMKKHNYPPFPEPFDQYISKFGTVEDAVNFFKVLSVKEYPSSVAY 429