BLASTX nr result

ID: Cimicifuga21_contig00024348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024348
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   137   9e-31
ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   137   1e-30
emb|CBI23303.3| unnamed protein product [Vitis vinifera]              137   1e-30
emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]   137   1e-30
ref|XP_004134961.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3-l...   134   1e-29

>ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
           gi|223536047|gb|EEF37705.1| TRANSPORT INHIBITOR RESPONSE
           1 protein, putative [Ricinus communis]
          Length = 589

 Score =  137 bits (346), Expect = 9e-31
 Identities = 68/84 (80%), Positives = 72/84 (85%)
 Frame = -2

Query: 253 EEDKKRALGSVFVCLESNKDRSSVSLVCKDWYNAERFSRTHVFIGNCYSVSPEIVVDRFP 74
           +E  +R LG     L+SNKDRSSVSLVCKDWYNAER+SRTHVFIGNCYSVSPEIV  RFP
Sbjct: 26  DEVLERVLG----LLKSNKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRFP 81

Query: 73  NIRSVTLKGKPRFSDFNLVPPNWG 2
            IRSVTLKGKPRFSDFNLVP NWG
Sbjct: 82  KIRSVTLKGKPRFSDFNLVPRNWG 105


>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score =  137 bits (345), Expect = 1e-30
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 EEDKKRALGSVFVCLESNKDRSSVSLVCKDWYNAERFSRTHVFIGNCYSVSPEIVVDRFP 74
           +E  +R LG V    +S+KDRSSVSLVCKDWYNAER+SRTHVFIGNCYSVSPEIV  RFP
Sbjct: 23  DEVLERVLGLV----KSHKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRFP 78

Query: 73  NIRSVTLKGKPRFSDFNLVPPNWG 2
           NIRSVTLKGKPRFSDFNLVP NWG
Sbjct: 79  NIRSVTLKGKPRFSDFNLVPLNWG 102


>emb|CBI23303.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  137 bits (345), Expect = 1e-30
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 EEDKKRALGSVFVCLESNKDRSSVSLVCKDWYNAERFSRTHVFIGNCYSVSPEIVVDRFP 74
           +E  +R LG V    +S+KDRSSVSLVCKDWYNAER+SRTHVFIGNCYSVSPEIV  RFP
Sbjct: 26  DEVLERVLGLV----KSHKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRFP 81

Query: 73  NIRSVTLKGKPRFSDFNLVPPNWG 2
           NIRSVTLKGKPRFSDFNLVP NWG
Sbjct: 82  NIRSVTLKGKPRFSDFNLVPLNWG 105


>emb|CAN66468.1| hypothetical protein VITISV_016565 [Vitis vinifera]
          Length = 620

 Score =  137 bits (345), Expect = 1e-30
 Identities = 68/84 (80%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 EEDKKRALGSVFVCLESNKDRSSVSLVCKDWYNAERFSRTHVFIGNCYSVSPEIVVDRFP 74
           +E  +R LG V    +S+KDRSSVSLVCKDWYNAER+SRTHVFIGNCYSVSPEIV  RFP
Sbjct: 23  DEVLERVLGLV----KSHKDRSSVSLVCKDWYNAERWSRTHVFIGNCYSVSPEIVARRFP 78

Query: 73  NIRSVTLKGKPRFSDFNLVPPNWG 2
           NIRSVTLKGKPRFSDFNLVP NWG
Sbjct: 79  NIRSVTLKGKPRFSDFNLVPLNWG 102


>ref|XP_004134961.1| PREDICTED: protein AUXIN SIGNALING F-BOX 3-like [Cucumis sativus]
           gi|449528142|ref|XP_004171065.1| PREDICTED: protein
           AUXIN SIGNALING F-BOX 3-like [Cucumis sativus]
          Length = 584

 Score =  134 bits (337), Expect = 1e-29
 Identities = 64/93 (68%), Positives = 75/93 (80%), Gaps = 9/93 (9%)
 Frame = -2

Query: 253 EEDKKRALGSVFV---------CLESNKDRSSVSLVCKDWYNAERFSRTHVFIGNCYSVS 101
           + D+    GS+F           ++S++DRSSVSLVCKDW+NAER+SRTHVFIGNCYSVS
Sbjct: 11  DSDESNRAGSIFPDEVLERVLSLVKSHRDRSSVSLVCKDWFNAERWSRTHVFIGNCYSVS 70

Query: 100 PEIVVDRFPNIRSVTLKGKPRFSDFNLVPPNWG 2
           PEIV+ RFPNIRSVTLKGKPRFSDFNLVP +WG
Sbjct: 71  PEIVIRRFPNIRSVTLKGKPRFSDFNLVPSDWG 103


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