BLASTX nr result

ID: Cimicifuga21_contig00024347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024347
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315865.1| predicted protein [Populus trichocarpa] gi|2...   185   3e-45
ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-l...   184   5e-45
emb|CBI26852.3| unnamed protein product [Vitis vinifera]              184   5e-45
ref|XP_004150121.1| PREDICTED: dynein light chain 1, cytoplasmic...   184   9e-45
ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycin...   181   5e-44

>ref|XP_002315865.1| predicted protein [Populus trichocarpa] gi|222864905|gb|EEF02036.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/109 (79%), Positives = 100/109 (91%)
 Frame = +1

Query: 127 IQKKKAVQQEEQHELLNVRVRASDMPLYLQNQAFQCARHSLDSMPNKLDSKRLALALKKE 306
           I+KKKA + +EQH  LNVRVRA+DMP+ LQ++AF+CAR  LDSMP KLDSKRLALALKKE
Sbjct: 19  IEKKKAKEHQEQHSKLNVRVRAADMPVLLQDRAFRCARDQLDSMPGKLDSKRLALALKKE 78

Query: 307 FDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTAVEPLD 453
           FD++YGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLF+TAVEPL+
Sbjct: 79  FDAAYGPAWHCIVGTSFGSYVTHSTGGFLYFSIDKVYILLFRTAVEPLN 127


>ref|XP_002284827.1| PREDICTED: dynein light chain, cytoplasmic-like [Vitis vinifera]
          Length = 127

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/109 (84%), Positives = 99/109 (90%)
 Frame = +1

Query: 127 IQKKKAVQQEEQHELLNVRVRASDMPLYLQNQAFQCARHSLDSMPNKLDSKRLALALKKE 306
           IQKKKA    EQH+ LNVRVRASDMPL LQ++AF+CAR +LD+MP KLDSKRLALALKKE
Sbjct: 21  IQKKKAT---EQHDHLNVRVRASDMPLALQSRAFKCARDNLDAMPGKLDSKRLALALKKE 77

Query: 307 FDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTAVEPLD 453
           FDS YGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLFKTAVEPLD
Sbjct: 78  FDSLYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLD 126


>emb|CBI26852.3| unnamed protein product [Vitis vinifera]
          Length = 125

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/109 (84%), Positives = 99/109 (90%)
 Frame = +1

Query: 127 IQKKKAVQQEEQHELLNVRVRASDMPLYLQNQAFQCARHSLDSMPNKLDSKRLALALKKE 306
           IQKKKA    EQH+ LNVRVRASDMPL LQ++AF+CAR +LD+MP KLDSKRLALALKKE
Sbjct: 19  IQKKKAT---EQHDHLNVRVRASDMPLALQSRAFKCARDNLDAMPGKLDSKRLALALKKE 75

Query: 307 FDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTAVEPLD 453
           FDS YGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLFKTAVEPLD
Sbjct: 76  FDSLYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLD 124


>ref|XP_004150121.1| PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis sativus]
           gi|449517979|ref|XP_004166021.1| PREDICTED: dynein light
           chain 1, cytoplasmic-like [Cucumis sativus]
          Length = 134

 Score =  184 bits (466), Expect = 9e-45
 Identities = 91/108 (84%), Positives = 96/108 (88%)
 Frame = +1

Query: 127 IQKKKAVQQEEQHELLNVRVRASDMPLYLQNQAFQCARHSLDSMPNKLDSKRLALALKKE 306
           I KKKA +Q+EQ + LNVRVRASDM   LQN+AF CAR  LDSMP KLDSKRLALALKKE
Sbjct: 19  ILKKKAGEQQEQRDRLNVRVRASDMAFPLQNRAFSCARELLDSMPGKLDSKRLALALKKE 78

Query: 307 FDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTAVEPL 450
           FDSSYGPAWHCIVGTSFGSYVTHS GGFLYFSIDKVY+LLFKTAVEPL
Sbjct: 79  FDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPL 126


>ref|NP_001236748.1| uncharacterized protein LOC100305536 [Glycine max]
           gi|255625837|gb|ACU13263.1| unknown [Glycine max]
          Length = 133

 Score =  181 bits (460), Expect = 5e-44
 Identities = 92/113 (81%), Positives = 101/113 (89%), Gaps = 4/113 (3%)
 Frame = +1

Query: 127 IQKKKAVQQEEQHELL---NVRVRASDMPLYLQNQAFQCARHSLDSMPNK-LDSKRLALA 294
           IQKKK ++Q+EQH+ L   NVRVRA DMPL LQN+AF+CAR  LDSMP+K LDSKRLAL 
Sbjct: 19  IQKKKTIEQQEQHDHLQHNNVRVRACDMPLPLQNRAFRCARDLLDSMPSKKLDSKRLALT 78

Query: 295 LKKEFDSSYGPAWHCIVGTSFGSYVTHSAGGFLYFSIDKVYVLLFKTAVEPLD 453
           LKKEFD+SYGPAWHCIVGTSFGSYVTHS GGF+YFSIDKVYVLLFKTAVEPLD
Sbjct: 79  LKKEFDTSYGPAWHCIVGTSFGSYVTHSFGGFVYFSIDKVYVLLFKTAVEPLD 131


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