BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024345
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]   124   6e-27
ref|XP_002520126.1| pentatricopeptide repeat-containing protein,...   117   7e-25
ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
gb|ABK28160.1| unknown [Arabidopsis thaliana]                         105   4e-21

>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
           [Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
           protein product [Vitis vinifera]
          Length = 617

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/91 (68%), Positives = 72/91 (79%)
 Frame = -2

Query: 273 SLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXXX 94
           SLKS+TSLL ACSALSA QSGKEIHGHTIR+NID+DEFI+T+LIDMYMKCG+S  A    
Sbjct: 369 SLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF 428

Query: 93  XXXXXXXXDPALWNAMISGYGRNGESENALD 1
                   DPA WNAMISGYGRNG+ ++A +
Sbjct: 429 CQFQIKPDDPAFWNAMISGYGRNGKYQSAFE 459



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/92 (34%), Positives = 51/92 (55%)
 Frame = -2

Query: 276 PSLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXX 97
           P+  ++ S+L ACS L   + G++IHG  ++  I+ D  + T+L+DMY KCG   WA   
Sbjct: 231 PNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGI 290

Query: 96  XXXXXXXXXDPALWNAMISGYGRNGESENALD 1
                        WN+MI+G   NG+S+ A++
Sbjct: 291 FIELSGSRNL-VTWNSMIAGMMLNGQSDIAVE 321


>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
          Length = 677

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/91 (68%), Positives = 72/91 (79%)
 Frame = -2

Query: 273 SLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXXX 94
           SLKS+TSLL ACSALSA QSGKEIHGHTIR+NID+DEFI+T+LIDMYMKCG+S  A    
Sbjct: 429 SLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVF 488

Query: 93  XXXXXXXXDPALWNAMISGYGRNGESENALD 1
                   DPA WNAMISGYGRNG+ ++A +
Sbjct: 489 CQFQIKPDDPAFWNAMISGYGRNGKYQSAFE 519



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/92 (34%), Positives = 51/92 (55%)
 Frame = -2

Query: 276 PSLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXX 97
           P+  ++ S+L ACS L   + G++IHG  ++  I+ D  + T+L+DMY KCG   WA   
Sbjct: 291 PNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGI 350

Query: 96  XXXXXXXXXDPALWNAMISGYGRNGESENALD 1
                        WN+MI+G   NG+S+ A++
Sbjct: 351 FIELSGSRNL-VTWNSMIAGMMLNGQSDIAVE 381


>ref|XP_002520126.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540618|gb|EEF42181.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 593

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/92 (58%), Positives = 68/92 (73%)
 Frame = -2

Query: 276 PSLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXX 97
           PSLKSVTSLL AC++L+A Q GKEIHGH +R+N++ DEF+ T LIDMYMKCG+S W    
Sbjct: 471 PSLKSVTSLLAACASLTALQCGKEIHGHVVRTNMNFDEFMATGLIDMYMKCGFSLWGQRV 530

Query: 96  XXXXXXXXXDPALWNAMISGYGRNGESENALD 1
                    DPA+WNA+ISGY RNGE+E+  +
Sbjct: 531 FDQFEIKPKDPAIWNALISGYARNGENESVFE 562



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/92 (33%), Positives = 49/92 (53%)
 Frame = -2

Query: 276 PSLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXX 97
           P+  ++ S++ ACS L   Q G ++H    ++ +  D  + TSL+DMY KCGY  WA   
Sbjct: 334 PNSLTLVSVIAACSTLLYIQFGMQVHVFLKKTQMGCDTMVGTSLVDMYSKCGYWKWAYNV 393

Query: 96  XXXXXXXXXDPALWNAMISGYGRNGESENALD 1
                        WN+MI+G   N +S+NA++
Sbjct: 394 FNEMNDNKNL-ITWNSMIAGMMLNAQSQNAIE 424


>ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02750-like [Glycine max]
          Length = 627

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/92 (54%), Positives = 64/92 (69%)
 Frame = -2

Query: 276 PSLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXX 97
           P LK VTSLL AC+  S  Q GKEIHG ++R++I+ D+F+ T+L+DMYMKCG +SWA   
Sbjct: 378 PCLKIVTSLLSACADSSMLQHGKEIHGLSLRTDINRDDFLVTALVDMYMKCGLASWARGV 437

Query: 96  XXXXXXXXXDPALWNAMISGYGRNGESENALD 1
                    DPA WNAMI GYGRNG+ E+A +
Sbjct: 438 FDQYDAKPDDPAFWNAMIGGYGRNGDYESAFE 469



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
 Frame = -2

Query: 270 LKSVT--SLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXX 97
           L SVT  S+L AC +L + + G+++HG  ++        + T+L+DMY KCG+   A   
Sbjct: 240 LNSVTLVSVLSACGSLQSIRFGRQVHGVVVKLEAGDGVMVMTALVDMYSKCGFWRSAFEV 299

Query: 96  XXXXXXXXXDPALWNAMISGYGRNGESENALD 1
                    +   WN+MI+G   N ESE A+D
Sbjct: 300 FTGVEGNRRNLITWNSMIAGMMLNKESERAVD 331


>gb|ABK28160.1| unknown [Arabidopsis thaliana]
          Length = 614

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = -2

Query: 276 PSLKSVTSLLPACSALSAFQSGKEIHGHTIRSNIDSDEFITTSLIDMYMKCGYSSWAXXX 97
           PSLK +TSLL ACS +   ++GKEIHGH I++  + D F+ TSLIDMYMKCG SSWA   
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI 425

Query: 96  XXXXXXXXXDPALWNAMISGYGRNGESENALD 1
                    DP  WN MISGYG++GE E+A++
Sbjct: 426 FDRFEPKPKDPVFWNVMISGYGKHGECESAIE 457