BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024336
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ95187.1| predicted protein [Hordeum vulgare subsp. vulgare]     87   4e-15
gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-...    83   8e-14
ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG4...    82   2e-13
ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [S...    80   7e-13
ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group] g...    78   3e-12

>dbj|BAJ95187.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 297

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 20/179 (11%)
 Frame = -3

Query: 771 RSWEDLDGDVLLSIYQKLDMKDLLFG-APLCCSSWYAVSKEPCIWREVDLQ--------- 622
           RSW +L  D+L++I  ++   DLL G AP  CS+W+A +++P  WR VDL+         
Sbjct: 7   RSWGELQHDLLVAIMSRVGAPDLLSGGAPRTCSAWWAAARDPLAWRRVDLRDWTARTSAR 66

Query: 621 ----------FTEFNLHPTQLTEFVVARSQGSLTSIKFPLTASVDDLLLVANRCPGLKHF 472
                         +   T   E    R+ G + ++  P  A  + L+L+A R P L++F
Sbjct: 67  RAAGTAATRGIVSVHAALTGDLEVAATRADGRMEAVLLPEFADEEHLMLLAERSPNLQYF 126

Query: 471 DLRIPSEKLLKRELIGITFSKLNKLEGMAVGDLFVSDGCALEQISQCCPNFTKLKVYGI 295
               P+  +   +  G   SKL  L+GMAV +  V     L  + QCCP F +LKV+ +
Sbjct: 127 S--FPTTCMTSDDFCG-AISKLQSLKGMAVDESLVHYDVLL-HVHQCCPGFRELKVFAL 181


>gb|ACF84400.1| unknown [Zea mays] gi|413933776|gb|AFW68327.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
 Frame = -3

Query: 771 RSWEDLDGDVLLSIYQKLDMKDLLFG-APLCCSSWYAVSKEPCIWREVDLQ--------- 622
           RSW +L  D+L+SI  ++   DLL+G A   CSSW A +++P  WR VDL+         
Sbjct: 7   RSWAELQHDLLVSIMTRVGAPDLLWGGASRACSSWRAAARDPLAWRRVDLRDWVALTSGR 66

Query: 621 --------FTEFNLHP--TQLTEFVVARSQGSLTSIKFPLTASVDDLLLVANRCPGLKHF 472
                    +  ++H     + E     ++G + ++  P  A  D LL +A RCP L +F
Sbjct: 67  RAARPGHSSSRVSVHAALVGILEVAAKLAEGRIEAVLLPEFADEDHLLFLAERCPNLHYF 126

Query: 471 DLRIPSEKLLKRELIGITFSKLNKLEGMAVGDLFVSDGCALEQISQCCPNFTKLKV 304
            L  PS  +   +        L  L+GMAV +  ++    L  + QCCP+F +LKV
Sbjct: 127 SL--PSTCMTYDQFCK-AIGGLQSLKGMAVDESLINYDVLL-HVHQCCPDFVELKV 178


>ref|NP_001151885.1| LOC100285522 [Zea mays] gi|195650579|gb|ACG44757.1| F-box domain
           containing protein [Zea mays]
          Length = 294

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
 Frame = -3

Query: 771 RSWEDLDGDVLLSIYQKLDMKDLLFG-APLCCSSWYAVSKEPCIWREVDLQ--------- 622
           RSW +L  D+L+SI  ++   DLL+G A   CSSW A +++P  WR VDL+         
Sbjct: 7   RSWAELQHDLLVSIMTRVGAPDLLWGGASRACSSWRAAARDPLAWRRVDLRDWVALTSGR 66

Query: 621 --------FTEFNLHP--TQLTEFVVARSQGSLTSIKFPLTASVDDLLLVANRCPGLKHF 472
                    +   +H     + E     ++G + ++  P  A  D LL +A RCP L +F
Sbjct: 67  RAARPGHSSSRVPVHAALVGILEVAAKLAEGRIEAVLLPEFADEDHLLFLAERCPNLHYF 126

Query: 471 DLRIPSEKLLKRELIGITFSKLNKLEGMAVGDLFVSDGCALEQISQCCPNFTKLKV 304
            L  PS  +   +        L  L+GMAV +  ++    L  + QCCP+F +LKV
Sbjct: 127 SL--PSTCMTYDQFCK-AIGGLQSLKGMAVDESLINYDVLL-HVHQCCPDFVELKV 178


>ref|XP_002464344.1| hypothetical protein SORBIDRAFT_01g016660 [Sorghum bicolor]
           gi|241918198|gb|EER91342.1| hypothetical protein
           SORBIDRAFT_01g016660 [Sorghum bicolor]
          Length = 297

 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
 Frame = -3

Query: 771 RSWEDLDGDVLLSIYQKLDMKDLLFG-APLCCSSWYAVSKEPCIWREVDLQ--------- 622
           R W +L  D+L++I  ++ + DLL G A   CSSW A +++P  WR VDL+         
Sbjct: 7   RPWAELQHDLLVAIVARVGVPDLLSGGASRACSSWRAAARDPLAWRRVDLRDWVALTSGR 66

Query: 621 --------FTEFNLHPTQ--LTEFVVARSQGSLTSIKFPLTASVDDLLLVANRCPGLKHF 472
                    +   +H     + E     ++G + ++  P  A  D LL +A RCP L++F
Sbjct: 67  RAARPGHSSSRVPVHAALFGILEVAAKLAEGRIEAVLLPEFADEDHLLFLAERCPNLQYF 126

Query: 471 DLRIPSEKLLKRELIGITFSKLNKLEGMAVGDLFVSDGCALEQISQCCPNFTKLKV 304
            L  PS  +   +        L+ L+GMAV +  ++    L  + QCCP+F +LKV
Sbjct: 127 SL--PSTCMTYDQFCK-AIGGLHSLKGMAVDETLINYDVLLH-VHQCCPDFVELKV 178


>ref|NP_001050490.1| Os03g0562200 [Oryza sativa Japonica Group]
           gi|108709324|gb|ABF97119.1| F-box domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548961|dbj|BAF12404.1| Os03g0562200 [Oryza sativa
           Japonica Group] gi|215686513|dbj|BAG87774.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215706384|dbj|BAG93240.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193151|gb|EEC75578.1| hypothetical protein
           OsI_12264 [Oryza sativa Indica Group]
          Length = 305

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 26/185 (14%)
 Frame = -3

Query: 771 RSWEDLDGDVLLSIYQKLDMKDLLFG-APLCCSSWYAVSKEPCIWREVDLQ----FTEFN 607
           R W DL  D+L+ I  ++ + DLL G A   CS+W A +++P +WR VDL+     T   
Sbjct: 9   RPWADLQHDLLVMIMSRVGLPDLLSGGATRACSAWRASARDPLVWRRVDLRDWAVLTSAR 68

Query: 606 LH----------------PTQ-----LTEFVVARSQGSLTSIKFPLTASVDDLLLVANRC 490
                             P Q     + E VV R+ G + ++  P  A  + LL +A R 
Sbjct: 69  RRLAAGDGEAAAAGRGRVPLQAALCSVLEIVVRRAAGRMEALLLPEFADEEHLLFLAQRN 128

Query: 489 PGLKHFDLRIPSEKLLKRELIGITFSKLNKLEGMAVGDLFVSDGCALEQISQCCPNFTKL 310
           P L +F L       +  +       KL  L+GMAV +  ++    L  + QCCP+F +L
Sbjct: 129 PNLHYFSL---PATCITYDQFRKAIDKLQFLKGMAVDEGLINHD-VLSHVHQCCPDFLEL 184

Query: 309 KVYGI 295
           KV+ +
Sbjct: 185 KVFAL 189