BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024304
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31844.3| unnamed protein product [Vitis vinifera]              498   e-138
ref|XP_002274961.1| PREDICTED: traB domain-containing protein-li...   496   e-138
ref|XP_002510844.1| conserved hypothetical protein [Ricinus comm...   480   e-133
ref|XP_003536482.1| PREDICTED: traB domain-containing protein-li...   464   e-128
ref|XP_003592316.1| TraB domain-containing protein [Medicago tru...   463   e-128

>emb|CBI31844.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  498 bits (1281), Expect = e-138
 Identities = 251/317 (79%), Positives = 281/317 (88%), Gaps = 3/317 (0%)
 Frame = -2

Query: 984  NGSLVLIEKKLFGPVPIWRTEFVEPEEIWLVGTSHISLESAMDVERVVQAVKPDNVVVEL 805
            NGSLV+IEK+LFGPVP WRTEFVEPEEIWL+GT+HIS  SA DVERVV+ V PDNVVVEL
Sbjct: 66   NGSLVVIEKRLFGPVPAWRTEFVEPEEIWLLGTTHISSFSAADVERVVEVVNPDNVVVEL 125

Query: 804  CRSR---AGIMYTSNEGDTGPQLKSNMFSLSGAGFFGAVGRSINLGGQTALALRLLLAVF 634
            CRSR   AGIMYTSN G+   QL+S+MFSLSG GFFGA+GRSINLGGQTALALRLLLAVF
Sbjct: 126  CRSRQVLAGIMYTSNHGELNQQLRSSMFSLSGTGFFGAIGRSINLGGQTALALRLLLAVF 185

Query: 633  SSKISSDANRPFGDEFRAARKASEEIGAQLVLGDRPIEITLERAWNSLKWNEKLGLLVSV 454
            SSKISSD NRPFGDEFRAARKASE++GAQ+VLGDRPIEITLERAWNSL+WNEKL L++SV
Sbjct: 186  SSKISSDVNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEWNEKLSLVISV 245

Query: 453  FRGITSPAVEMSRSNLKDQEKDESPFQLYEKLSFSYPSLLQPLIHERDTYLAWSLKRSKA 274
             RGITS   E+S + +K+   D+S FQLY++LS +YPSLLQPLIHERDTYLAWSLKRSKA
Sbjct: 246  IRGITSS--ELSTNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSLKRSKA 303

Query: 273  VNKCKRVVGVIGKGHMNGVIYALISDLGDLRFRDLCGQRSSSDNSNGWVDTLLKNLARDT 94
            VN  KRVVGVIGKGHMNGVIYAL+SD G+LRFRDL G+RSS D +NGWVD+LLKNL RDT
Sbjct: 304  VNGGKRVVGVIGKGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDSLLKNLVRDT 363

Query: 93   VIGILLWGLYEQLKTGL 43
            VIGILLW L+EQ+KT L
Sbjct: 364  VIGILLWALFEQIKTVL 380


>ref|XP_002274961.1| PREDICTED: traB domain-containing protein-like [Vitis vinifera]
          Length = 385

 Score =  496 bits (1276), Expect = e-138
 Identities = 251/322 (77%), Positives = 281/322 (87%), Gaps = 8/322 (2%)
 Frame = -2

Query: 984  NGSLVLIEKKLFGPVPIWRTEFVEPEEIWLVGTSHISLESAMDVERVVQAVKPDNVVVEL 805
            NGSLV+IEK+LFGPVP WRTEFVEPEEIWL+GT+HIS  SA DVERVV+ V PDNVVVEL
Sbjct: 66   NGSLVVIEKRLFGPVPAWRTEFVEPEEIWLLGTTHISSFSAADVERVVEVVNPDNVVVEL 125

Query: 804  CRSR--------AGIMYTSNEGDTGPQLKSNMFSLSGAGFFGAVGRSINLGGQTALALRL 649
            CRSR        AGIMYTSN G+   QL+S+MFSLSG GFFGA+GRSINLGGQTALALRL
Sbjct: 126  CRSRQVLSLVNGAGIMYTSNHGELNQQLRSSMFSLSGTGFFGAIGRSINLGGQTALALRL 185

Query: 648  LLAVFSSKISSDANRPFGDEFRAARKASEEIGAQLVLGDRPIEITLERAWNSLKWNEKLG 469
            LLAVFSSKISSD NRPFGDEFRAARKASE++GAQ+VLGDRPIEITLERAWNSL+WNEKL 
Sbjct: 186  LLAVFSSKISSDVNRPFGDEFRAARKASEKVGAQIVLGDRPIEITLERAWNSLEWNEKLS 245

Query: 468  LLVSVFRGITSPAVEMSRSNLKDQEKDESPFQLYEKLSFSYPSLLQPLIHERDTYLAWSL 289
            L++SV RGITS   E+S + +K+   D+S FQLY++LS +YPSLLQPLIHERDTYLAWSL
Sbjct: 246  LVISVIRGITSS--ELSTNEMKELSTDDSTFQLYDQLSVAYPSLLQPLIHERDTYLAWSL 303

Query: 288  KRSKAVNKCKRVVGVIGKGHMNGVIYALISDLGDLRFRDLCGQRSSSDNSNGWVDTLLKN 109
            KRSKAVN  KRVVGVIGKGHMNGVIYAL+SD G+LRFRDL G+RSS D +NGWVD+LLKN
Sbjct: 304  KRSKAVNGGKRVVGVIGKGHMNGVIYALVSDQGNLRFRDLVGKRSSGDGANGWVDSLLKN 363

Query: 108  LARDTVIGILLWGLYEQLKTGL 43
            L RDTVIGILLW L+EQ+KT L
Sbjct: 364  LVRDTVIGILLWALFEQIKTVL 385


>ref|XP_002510844.1| conserved hypothetical protein [Ricinus communis]
            gi|223549959|gb|EEF51446.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 390

 Score =  480 bits (1235), Expect = e-133
 Identities = 249/327 (76%), Positives = 272/327 (83%), Gaps = 13/327 (3%)
 Frame = -2

Query: 984  NGSLVLIEKKLFGPVPIWRTEFVEPEEIWLVGTSHISLESAMDVERVVQAVKPDNVVVEL 805
            +G+L+LIEK+LFGPVP WRTEFVEPE IWLVGTSHIS ESA  VERVV+AVKPDNVVVEL
Sbjct: 65   SGNLILIEKRLFGPVPAWRTEFVEPEAIWLVGTSHISTESATQVERVVRAVKPDNVVVEL 124

Query: 804  CRSR-------------AGIMYTSNEGDTGPQLKSNMFSLSGAGFFGAVGRSINLGGQTA 664
            CRSR             AGIMYTSNEG+   QL+SNMFSLSG GFFGAVGRSINLGGQTA
Sbjct: 125  CRSRQVLFLFMLIYKIKAGIMYTSNEGEDNQQLRSNMFSLSGNGFFGAVGRSINLGGQTA 184

Query: 663  LALRLLLAVFSSKISSDANRPFGDEFRAARKASEEIGAQLVLGDRPIEITLERAWNSLKW 484
            LALRLLLA+FSSKIS+D NRPFGDEFRAARK SEEIGAQ+VLGDRPIEITLERAWN+LKW
Sbjct: 185  LALRLLLALFSSKISNDVNRPFGDEFRAARKVSEEIGAQIVLGDRPIEITLERAWNALKW 244

Query: 483  NEKLGLLVSVFRGITSPAVEMSRSNLKDQEKDESPFQLYEKLSFSYPSLLQPLIHERDTY 304
             EKL L+ SV RGITS +   S+ + K  + D+  F LYEKLSFSYPSLL PLIHERDTY
Sbjct: 245  KEKLSLVSSVVRGITSSS-HTSKKDFKVPDTDDDTFLLYEKLSFSYPSLLPPLIHERDTY 303

Query: 303  LAWSLKRSKAVNKCKRVVGVIGKGHMNGVIYALISDLGDLRFRDLCGQRSSSDNSNGWVD 124
            LAWSLKRSKAVN  KRVVGVIGKGHMNGVIYAL+SDLG+LRFRDL GQR S   S G VD
Sbjct: 304  LAWSLKRSKAVNNSKRVVGVIGKGHMNGVIYALVSDLGNLRFRDLVGQRQSGSGSKGIVD 363

Query: 123  TLLKNLARDTVIGILLWGLYEQLKTGL 43
             LLK+L RDTVIG++LW LYEQ+K  L
Sbjct: 364  ELLKSLVRDTVIGVVLWVLYEQIKGAL 390


>ref|XP_003536482.1| PREDICTED: traB domain-containing protein-like [Glycine max]
          Length = 371

 Score =  464 bits (1194), Expect = e-128
 Identities = 230/315 (73%), Positives = 267/315 (84%), Gaps = 2/315 (0%)
 Frame = -2

Query: 984  NGSLVLIEKKLFGPVPIWRTEFVEPEEIWLVGTSHISLESAMDVERVVQAVKPDNVVVEL 805
            NGSLVL++KK FGPVP WRTEFVEPE IWL+GT+H+S  SA++VERVV+A++PDNVVVEL
Sbjct: 56   NGSLVLVQKKRFGPVPSWRTEFVEPESIWLIGTTHVSEVSAVEVERVVRALRPDNVVVEL 115

Query: 804  CRSRAGIMYTSNEGDTGPQLKSNMFSLSGAGFFGAVGRSINLGGQTALALRLLLAVFSSK 625
            CRSRAGIMY +   + G QL+SNMFSLSG GFFGAVGRSINLGGQTALALRLLLA FSSK
Sbjct: 116  CRSRAGIMYATANDELGKQLRSNMFSLSGTGFFGAVGRSINLGGQTALALRLLLATFSSK 175

Query: 624  ISSDANRPFGDEFRAARKASEEIGAQLVLGDRPIEITLERAWNSLKWNEKLGLLVSVFRG 445
            ISSD NRPFGDEFRAARKASEEIGAQ+VLGDRPIEITL+RAW ++KW +KL L++S+ RG
Sbjct: 176  ISSDINRPFGDEFRAARKASEEIGAQIVLGDRPIEITLQRAWKAMKWTQKLSLVLSIIRG 235

Query: 444  ITSPA-VEMSRSNLKDQEKDESPFQLYEKLSFSYPSLLQPLIHERDTYLAWSLKRSKAVN 268
            I S +   +++  L++   D+  FQLYE+LSFSYPSLL PLIHERDTYLAWSLKRSKAVN
Sbjct: 236  IASSSNSSINKLKLQEASSDDGTFQLYEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVN 295

Query: 267  KCKRVVGVIGKGHMNGVIYALISDLGDLRFRDLCGQRS-SSDNSNGWVDTLLKNLARDTV 91
              K VVGVIGKGHMNGVIYAL+SD G+LRFRDL G+ S     SNGW+D L+K+L RDT+
Sbjct: 296  NSKNVVGVIGKGHMNGVIYALLSDTGNLRFRDLVGKNSYDGGGSNGWIDDLIKSLVRDTI 355

Query: 90   IGILLWGLYEQLKTG 46
            IGILLW LYE +  G
Sbjct: 356  IGILLWALYEFINGG 370


>ref|XP_003592316.1| TraB domain-containing protein [Medicago truncatula]
           gi|355481364|gb|AES62567.1| TraB domain-containing
           protein [Medicago truncatula]
          Length = 380

 Score =  463 bits (1192), Expect = e-128
 Identities = 231/313 (73%), Positives = 264/313 (84%)
 Frame = -2

Query: 984 NGSLVLIEKKLFGPVPIWRTEFVEPEEIWLVGTSHISLESAMDVERVVQAVKPDNVVVEL 805
           NGSLVL++KK FGPVP WRTEFVEPE IWL+GT+H+S ESAMDVERVV+AVKPDNVVVEL
Sbjct: 66  NGSLVLVQKKRFGPVPSWRTEFVEPEYIWLIGTTHVSKESAMDVERVVKAVKPDNVVVEL 125

Query: 804 CRSRAGIMYTSNEGDTGPQLKSNMFSLSGAGFFGAVGRSINLGGQTALALRLLLAVFSSK 625
           CRSRAGIMY  ++     QL+S MFSLSG GFFGA+GRSINLGGQTALALRLLLA FSSK
Sbjct: 126 CRSRAGIMYADDD-QLDKQLRSTMFSLSGTGFFGAIGRSINLGGQTALALRLLLAAFSSK 184

Query: 624 ISSDANRPFGDEFRAARKASEEIGAQLVLGDRPIEITLERAWNSLKWNEKLGLLVSVFRG 445
           ISS+ +RPFGDEFRAARK SEE+GAQLVLGDRPIEITL+RAW +L W +KL LL  V RG
Sbjct: 185 ISSNIDRPFGDEFRAARKVSEEVGAQLVLGDRPIEITLQRAWKALNWTQKLSLLTIVVRG 244

Query: 444 ITSPAVEMSRSNLKDQEKDESPFQLYEKLSFSYPSLLQPLIHERDTYLAWSLKRSKAVNK 265
           ITS + ++S   L+    ++   QLYE+LSFSYPSLL PLIHERDTYLAWSLKRSKAVN 
Sbjct: 245 ITSSS-DISTDKLEKASSNDGTLQLYEQLSFSYPSLLPPLIHERDTYLAWSLKRSKAVNN 303

Query: 264 CKRVVGVIGKGHMNGVIYALISDLGDLRFRDLCGQRSSSDNSNGWVDTLLKNLARDTVIG 85
           CKRVVGVIGKGHMNGVIYAL++D G+LRFRDL G+ S+   SNGW+D L+K+L RDTVIG
Sbjct: 304 CKRVVGVIGKGHMNGVIYALLADTGNLRFRDLTGKNSNDGGSNGWIDDLVKSLVRDTVIG 363

Query: 84  ILLWGLYEQLKTG 46
           I+LW LYE +  G
Sbjct: 364 IVLWALYEYINGG 376