BLASTX nr result

ID: Cimicifuga21_contig00024303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024303
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304339.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910...    57   1e-06
dbj|BAJ94311.1| predicted protein [Hordeum vulgare subsp. vulgar...    57   1e-06
ref|XP_003530560.1| PREDICTED: uncharacterized protein At4g17910...    55   8e-06

>ref|XP_002304339.1| predicted protein [Populus trichocarpa] gi|222841771|gb|EEE79318.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 24/45 (53%), Positives = 35/45 (77%)
 Frame = -1

Query: 343 GLINMYVDTISTSSVAALAILIGYAFALCVLAGFAELSGIKLKFW 209
           GL+N+YVDT+ T S++AL IL+ YA+ L ++ G A+  G+KLKFW
Sbjct: 451 GLVNLYVDTLFTPSLSALVILLAYAYCLSIITGIADFYGVKLKFW 495


>ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910-like [Cucumis sativus]
           gi|449515271|ref|XP_004164673.1| PREDICTED:
           uncharacterized protein At4g17910-like [Cucumis sativus]
          Length = 471

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = -1

Query: 343 GLINMYVDTISTSSVAALAILIGYAFALCVLAGFAELSGIKLKFW 209
           GL+N+ VDT+STSS++AL IL+ YAF L +  G A  +GI+LKFW
Sbjct: 427 GLVNLSVDTLSTSSISALFILLVYAFILSIAMGLAYFNGIRLKFW 471


>dbj|BAJ94311.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326502334|dbj|BAJ95230.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 462

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -1

Query: 343 GLINMYVDTISTSSVAALAILIGYAFALCVLAGFAELSGIKLKFW 209
           GL+N+ VDT+S S + AL IL  Y F LC++AG A+ SG+++KFW
Sbjct: 418 GLVNLSVDTLSASPLTALMILSVYTFTLCMVAGLAQFSGVRIKFW 462


>ref|XP_003530560.1| PREDICTED: uncharacterized protein At4g17910-like [Glycine max]
          Length = 463

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -1

Query: 343 GLINMYVDTISTSSVAALAILIGYAFALCVLAGFAELSGIKLKFW 209
           GL+N+ VDT+S SS+ A  IL+ YA+ L ++ G A+  GIKLKFW
Sbjct: 419 GLVNLSVDTLSASSITAFFILLVYAYVLSIVIGIADYFGIKLKFW 463


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