BLASTX nr result

ID: Cimicifuga21_contig00024282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024282
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529641.1| conserved hypothetical protein [Ricinus comm...   142   3e-32
ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|2...   135   4e-30
ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245...   133   1e-29
emb|CBI17341.3| unnamed protein product [Vitis vinifera]              133   1e-29
emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]   132   3e-29

>ref|XP_002529641.1| conserved hypothetical protein [Ricinus communis]
           gi|223530867|gb|EEF32728.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 637

 Score =  142 bits (358), Expect = 3e-32
 Identities = 82/161 (50%), Positives = 97/161 (60%), Gaps = 1/161 (0%)
 Frame = +1

Query: 1   LKAADTGGHVSLLLEASSSRFFHQRSTGKVYNCGRNL-SPLTWTWGXXXXXXXFGRLGEE 177
           LKAAD GG +SLLLE  +  F  Q   GK+Y+ G NL SP  WTW        FG++ EE
Sbjct: 214 LKAADAGGQLSLLLEVPNPNFSTQNKGGKIYDHGCNLTSPSLWTWSSSPKMNGFGKMSEE 273

Query: 178 MIXXXXXXXXXXXXXXXXXXXERLYAWEKKLFEEVKNAENIRIEHEKRVTQLRKQELKGA 357
           M+                   ERLYAWEKKLF+EVKNAE+I+IEHEK+V  LRK E+K A
Sbjct: 274 MMGSNVGVSHCSTV-------ERLYAWEKKLFQEVKNAESIKIEHEKKVALLRKLEVKRA 326

Query: 358 DYMXXXXXXXXXXXXXSMMTVATQAIETTSAEIIRVREIEL 480
           DY+             S M VATQAIETTSAEII++RE EL
Sbjct: 327 DYVKTEKTKKEVEKLESQMMVATQAIETTSAEIIKLRETEL 367


>ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|222836741|gb|EEE75134.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score =  135 bits (339), Expect = 4e-30
 Identities = 80/162 (49%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
 Frame = +1

Query: 1   LKAADTGGHVSLLLEASSSRFF-HQRSTGKVYNCGRNL-SPLTWTWGXXXXXXXFGRLGE 174
           LKAAD GG +S +LE SS      Q   G+VYN G NL SP +WTWG       FG++ E
Sbjct: 199 LKAADAGGQLSRVLEVSSPNLSARQGKGGRVYNYGCNLTSPSSWTWGSSPKLDGFGKMSE 258

Query: 175 EMIXXXXXXXXXXXXXXXXXXXERLYAWEKKLFEEVKNAENIRIEHEKRVTQLRKQELKG 354
           EM+                   ERLYAWEKKLF EVKNAE+++IEHEK+V  LRK E++ 
Sbjct: 259 EMVVSHVGSGGVAHVSHCSTV-ERLYAWEKKLFIEVKNAESLKIEHEKKVALLRKLEVRR 317

Query: 355 ADYMXXXXXXXXXXXXXSMMTVATQAIETTSAEIIRVREIEL 480
           ADY+             S M VATQ IETTSAEII++RE EL
Sbjct: 318 ADYVKTEKIKKEVEKLESQMIVATQGIETTSAEIIKLRETEL 359


>ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245548 [Vitis vinifera]
          Length = 1169

 Score =  133 bits (335), Expect = 1e-29
 Identities = 82/162 (50%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
 Frame = +1

Query: 1    LKAADTGGHVSLLLEASSSRFFHQRSTGKVYNCGRNLSPLTWTWGXXXXXXXFGRLGEEM 180
            LKAAD G  VSLLLE   S F +Q   GKVY+CG++ +PL   W        FGRL EEM
Sbjct: 739  LKAADAGSEVSLLLEIPRSTFSNQTG-GKVYSCGKSSNPLWCPWASNSKLNGFGRLCEEM 797

Query: 181  IXXXXXXXXXXXXXXXXXXX-ERLYAWEKKLFEEVKNAENIRIEHEKRVTQLRKQELK-G 354
            +                    ERLYAWEKKLF+EVKNAE+I+IEHEK V QLRK E+K  
Sbjct: 798  VVTDIAGGGIISGSSSHCSTVERLYAWEKKLFQEVKNAESIKIEHEKCVAQLRKLEVKRA 857

Query: 355  ADYMXXXXXXXXXXXXXSMMTVATQAIETTSAEIIRVREIEL 480
            ADY+             S M VA+QAIETTS EII++RE EL
Sbjct: 858  ADYVKTEKTKKEVEKLESRMMVASQAIETTSTEIIKLRESEL 899


>emb|CBI17341.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  133 bits (335), Expect = 1e-29
 Identities = 82/162 (50%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
 Frame = +1

Query: 1   LKAADTGGHVSLLLEASSSRFFHQRSTGKVYNCGRNLSPLTWTWGXXXXXXXFGRLGEEM 180
           LKAAD G  VSLLLE   S F +Q   GKVY+CG++ +PL   W        FGRL EEM
Sbjct: 56  LKAADAGSEVSLLLEIPRSTFSNQTG-GKVYSCGKSSNPLWCPWASNSKLNGFGRLCEEM 114

Query: 181 IXXXXXXXXXXXXXXXXXXX-ERLYAWEKKLFEEVKNAENIRIEHEKRVTQLRKQELK-G 354
           +                    ERLYAWEKKLF+EVKNAE+I+IEHEK V QLRK E+K  
Sbjct: 115 VVTDIAGGGIISGSSSHCSTVERLYAWEKKLFQEVKNAESIKIEHEKCVAQLRKLEVKRA 174

Query: 355 ADYMXXXXXXXXXXXXXSMMTVATQAIETTSAEIIRVREIEL 480
           ADY+             S M VA+QAIETTS EII++RE EL
Sbjct: 175 ADYVKTEKTKKEVEKLESRMMVASQAIETTSTEIIKLRESEL 216


>emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]
          Length = 627

 Score =  132 bits (332), Expect = 3e-29
 Identities = 82/162 (50%), Positives = 96/162 (59%), Gaps = 2/162 (1%)
 Frame = +1

Query: 1   LKAADTGGHVSLLLEASSSRFFHQRSTGKVYNCGRNLSPLTWTWGXXXXXXXFGRLGEEM 180
           LKAAD G  VSLLLE   S F +Q   GKVY+CG++ +PL   W        FGRL EEM
Sbjct: 197 LKAADAGSEVSLLLEIPRSTFSNQTG-GKVYSCGKSSNPLWCPWVSNSKLNGFGRLCEEM 255

Query: 181 IXXXXXXXXXXXXXXXXXXX-ERLYAWEKKLFEEVKNAENIRIEHEKRVTQLRKQELK-G 354
           +                    ERLYAWEKKLF+EVKNAE+I+IEHEK V QLRK E+K  
Sbjct: 256 VVTDIAGGGIISGSGSHCSTVERLYAWEKKLFQEVKNAESIKIEHEKCVAQLRKLEVKRA 315

Query: 355 ADYMXXXXXXXXXXXXXSMMTVATQAIETTSAEIIRVREIEL 480
           ADY+             S M VA+QAIETTS EII++RE EL
Sbjct: 316 ADYVKTEKTKKEVEKLESRMMVASQAIETTSTEIIKLRESEL 357


Top