BLASTX nr result
ID: Cimicifuga21_contig00024264
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00024264 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 141 5e-32 ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 115 4e-24 ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 115 5e-24 ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 115 5e-24 ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2... 113 2e-23 >ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis vinifera] Length = 540 Score = 141 bits (356), Expect = 5e-32 Identities = 66/101 (65%), Positives = 79/101 (78%), Gaps = 7/101 (6%) Frame = -3 Query: 285 MED----NMNENSSAISNGGETT---VKEKCWDQREALPGEPICVICGRYGEYICDETDD 127 MED N +NS +++ E T VKE+CWDQREALPGEP CVICGRYGEYICDETDD Sbjct: 1 MEDGKKGNQGKNSVELTDDNEGTADGVKERCWDQREALPGEPKCVICGRYGEYICDETDD 60 Query: 126 DVCSLGCKQTLLSKLSKNQKPENLPPPARIPVTDECFYVKD 4 D+CSL CKQTLL +++K++ P LPPP R+P TDECFYV+D Sbjct: 61 DICSLECKQTLLCRVAKSRLPVVLPPPKRLPTTDECFYVRD 101 >ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max] Length = 528 Score = 115 bits (288), Expect = 4e-24 Identities = 54/81 (66%), Positives = 60/81 (74%) Frame = -3 Query: 246 NGGETTVKEKCWDQREALPGEPICVICGRYGEYICDETDDDVCSLGCKQTLLSKLSKNQK 67 N E VK + DQR ALPGEP C+ICGRYGEYICDETDDDVCSL CKQ LL +++K+ Sbjct: 21 NDAEDEVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALLCRIAKSSS 80 Query: 66 PENLPPPARIPVTDECFYVKD 4 PPP RIP DECFYVKD Sbjct: 81 ----PPPKRIPAADECFYVKD 97 >ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis sativus] Length = 532 Score = 115 bits (287), Expect = 5e-24 Identities = 50/81 (61%), Positives = 62/81 (76%) Frame = -3 Query: 246 NGGETTVKEKCWDQREALPGEPICVICGRYGEYICDETDDDVCSLGCKQTLLSKLSKNQK 67 + GE+ VK KC +QREA PGEP CV+CGRYGEYICDETDDDVCS+ CKQ++L K++ Sbjct: 21 DSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMA 80 Query: 66 PENLPPPARIPVTDECFYVKD 4 P+ P R+P DECFYVK+ Sbjct: 81 PDK-APSKRLPAADECFYVKE 100 >ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis sativus] Length = 532 Score = 115 bits (287), Expect = 5e-24 Identities = 50/81 (61%), Positives = 62/81 (76%) Frame = -3 Query: 246 NGGETTVKEKCWDQREALPGEPICVICGRYGEYICDETDDDVCSLGCKQTLLSKLSKNQK 67 + GE+ VK KC +QREA PGEP CV+CGRYGEYICDETDDDVCS+ CKQ++L K++ Sbjct: 21 DSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMA 80 Query: 66 PENLPPPARIPVTDECFYVKD 4 P+ P R+P DECFYVK+ Sbjct: 81 PDK-APSKRLPAADECFYVKE 100 >ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1| predicted protein [Populus trichocarpa] Length = 524 Score = 113 bits (282), Expect = 2e-23 Identities = 50/83 (60%), Positives = 59/83 (71%) Frame = -3 Query: 252 ISNGGETTVKEKCWDQREALPGEPICVICGRYGEYICDETDDDVCSLGCKQTLLSKLSKN 73 +S VK+ DQREALPGEPICV+CGRYGEYICD+TD D+CSL CKQTLL + + Sbjct: 11 VSEAAGDDVKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECKQTLLGRAADT 70 Query: 72 QKPENLPPPARIPVTDECFYVKD 4 P P P R+ TDECFYV+D Sbjct: 71 HLPVGHPLPKRLAATDECFYVRD 93