BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024262
         (1228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   507   e-141
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...   496   e-138
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C...   466   e-129
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   455   e-125
ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein C...   450   e-124

>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic [Vitis
            vinifera] gi|297741415|emb|CBI32546.3| unnamed protein
            product [Vitis vinifera]
          Length = 557

 Score =  507 bits (1305), Expect = e-141
 Identities = 262/360 (72%), Positives = 294/360 (81%), Gaps = 13/360 (3%)
 Frame = -3

Query: 1043 SKT-HIKSPSLHSIFK-------THHPSYCTKRNFSVKIVSELKTSQNKKTP--ITKKII 894
            SKT  +KSP L S FK       T   S C+    S  I  +LKTS++ K+   + KKI+
Sbjct: 9    SKTLFLKSPLLRSSFKPQFFPYTTQISSPCSSTPLSFSITCKLKTSEDGKSSKSLAKKIV 68

Query: 893  LSEGAPSLSEDVPSKEENAPKPRKNAGGPVLRF---LKRAPRKFLSILSNLPLAIGEMFS 723
            LSEGAP++SED     E  PKP    GG    F   +KR PRK LS LSNLPLAIGEMF+
Sbjct: 69   LSEGAPAVSEDGAGNGEAQPKPASKGGGGGGGFGGLVKRFPRKVLSRLSNLPLAIGEMFT 128

Query: 722  IAALMALGTAIDQGEVPDYYIQKYAESNPVLGLFTWKWILFFGFDHMFTSPVFLGMLILL 543
            +AALMALGTAIDQGE PDYY QK+ E NPVLG FTW+W+L  GFDHMF+SP+FLGML LL
Sbjct: 129  VAALMALGTAIDQGEAPDYYFQKFPEDNPVLGFFTWRWVLTLGFDHMFSSPIFLGMLALL 188

Query: 542  GASLMACTYTTQIPIVKVARRWNFLHSAVAIRKQAYTDSLPRASVRELGVILMGAGYEVF 363
              SLMACTYTTQIP+VKVARRWNFLHSA AIRKQ +++SLP+ASVR+LGV+LMGAGYEVF
Sbjct: 189  ATSLMACTYTTQIPLVKVARRWNFLHSAEAIRKQEFSESLPKASVRDLGVVLMGAGYEVF 248

Query: 362  LKGPSLYAFKGLAGRFAPIGVHLAMLLIMAGGTLSASGSFRGSVTVPQGLNFVMGDVLGP 183
            LKGPSLYAFKGLAGRFAPIGVHLAMLLIM GGTLSA+GSFRGSVTVPQGLNFVMGDVL P
Sbjct: 249  LKGPSLYAFKGLAGRFAPIGVHLAMLLIMVGGTLSATGSFRGSVTVPQGLNFVMGDVLSP 308

Query: 182  SGFLSRPTEAFNTEVHVNRFYMDYYDSGEISQFHTDLSLYDLDGKEVMRKTISVNDPLRY 3
            SGFLS PT+AF+TEVHVNRFYMDYYDSGE+ QFHTDLSL+DL+GKEVMRKTISVNDPLR+
Sbjct: 309  SGFLSTPTKAFDTEVHVNRFYMDYYDSGEVLQFHTDLSLFDLNGKEVMRKTISVNDPLRF 368


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
            gi|223541761|gb|EEF43309.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 556

 Score =  496 bits (1276), Expect = e-138
 Identities = 252/358 (70%), Positives = 294/358 (82%), Gaps = 9/358 (2%)
 Frame = -3

Query: 1049 NPSKTHIKS--PSLHSIFKTHHPSY--CTKRNFSVKIVSELKTS---QNKKTPITKKIIL 891
            +P KTH  +  P ++S  K +   +  C +R  S+ +  +LKTS   +NK   +++KI+L
Sbjct: 10   SPLKTHFINFHPFINSTIKLNPQIHILCNRRALSLSVSCKLKTSKEVENKDKNVSRKILL 69

Query: 890  SEGAPSLSED--VPSKEENAPKPRKNAGGPVLRFLKRAPRKFLSILSNLPLAIGEMFSIA 717
            S  AP +SE+    +  E   K  K  GGP LRF KR PRK LS+LSNLPLAIGEMF+IA
Sbjct: 70   SNSAPPVSEEGGAGNNGEIPDKAAKGGGGP-LRFFKRLPRKVLSVLSNLPLAIGEMFAIA 128

Query: 716  ALMALGTAIDQGEVPDYYIQKYAESNPVLGLFTWKWILFFGFDHMFTSPVFLGMLILLGA 537
             LMALGT IDQG+ P+ Y Q Y E NPVLG FTW+WIL  GFDHMF+SPVFLGML LLG 
Sbjct: 129  GLMALGTVIDQGQAPEIYFQNYPEENPVLGFFTWRWILTLGFDHMFSSPVFLGMLALLGL 188

Query: 536  SLMACTYTTQIPIVKVARRWNFLHSAVAIRKQAYTDSLPRASVRELGVILMGAGYEVFLK 357
            SLMACTYTTQIP+VKVARRWNFLHSA AIRKQ + D+LP+AS++++GVILMGAGYEVFLK
Sbjct: 189  SLMACTYTTQIPLVKVARRWNFLHSAEAIRKQEFADTLPQASIQDVGVILMGAGYEVFLK 248

Query: 356  GPSLYAFKGLAGRFAPIGVHLAMLLIMAGGTLSASGSFRGSVTVPQGLNFVMGDVLGPSG 177
            GPSLYAFKGLAGRFAPIGVHLAMLLIMAG TL+A+GSFRGSVTVPQGLNFV+GDVLGPSG
Sbjct: 249  GPSLYAFKGLAGRFAPIGVHLAMLLIMAGATLTATGSFRGSVTVPQGLNFVVGDVLGPSG 308

Query: 176  FLSRPTEAFNTEVHVNRFYMDYYDSGEISQFHTDLSLYDLDGKEVMRKTISVNDPLRY 3
            FLS PTEAFNTEVHVN+FYMDYYDSGE+SQF++DLSLYD+DGKEV+RKTISVN+PLRY
Sbjct: 309  FLSTPTEAFNTEVHVNKFYMDYYDSGEVSQFYSDLSLYDIDGKEVLRKTISVNNPLRY 366


>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
            [Cucumis sativus]
          Length = 560

 Score =  466 bits (1200), Expect = e-129
 Identities = 239/355 (67%), Positives = 283/355 (79%), Gaps = 5/355 (1%)
 Frame = -3

Query: 1052 LNPSKTH---IKSPSLHSIFKTHHPSYCTKRNFSVKIVSELKTSQNKKTP-ITKKIILSE 885
            LNPS +    +K+  LHS+F +H  +  T +  S  +  + K SQ+KK    + KI+LSE
Sbjct: 19   LNPSLSKPFLLKTSFLHSVF-SHQITLRTAQIRSFSVTCKNKASQDKKLKNASNKIVLSE 77

Query: 884  GAPSLSEDVPSKEENAPKPRKNAGGP-VLRFLKRAPRKFLSILSNLPLAIGEMFSIAALM 708
             AP L+E+   K  NA    K   G   ++ +KR P++ L  LSNLPLAIGEMF+IAALM
Sbjct: 78   AAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGALSNLPLAIGEMFTIAALM 137

Query: 707  ALGTAIDQGEVPDYYIQKYAESNPVLGLFTWKWILFFGFDHMFTSPVFLGMLILLGASLM 528
            ALGT IDQGE PD+Y QKY E NP+ G F W+WIL  GFDHM++S +FLGML LLG SLM
Sbjct: 138  ALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMYSSTIFLGMLALLGISLM 197

Query: 527  ACTYTTQIPIVKVARRWNFLHSAVAIRKQAYTDSLPRASVRELGVILMGAGYEVFLKGPS 348
            ACTYTTQIP+VKVARRWNFL S   IRK   +D LPRASV++LGV+LMGAGYEVF+KGP+
Sbjct: 198  ACTYTTQIPLVKVARRWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYEVFIKGPT 257

Query: 347  LYAFKGLAGRFAPIGVHLAMLLIMAGGTLSASGSFRGSVTVPQGLNFVMGDVLGPSGFLS 168
            LYAFKGLAGRFAPIGVHLAMLLIMAG TLSA+GSFRGSVTVPQGLNFV+GDVL PSGFL+
Sbjct: 258  LYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVLNPSGFLA 317

Query: 167  RPTEAFNTEVHVNRFYMDYYDSGEISQFHTDLSLYDLDGKEVMRKTISVNDPLRY 3
            +PTEAFNTEVHVN+FYM+YYDSGEI QF++DLSL+DL+GKEVMRKTISVN+PLRY
Sbjct: 318  KPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVMRKTISVNNPLRY 372


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
            [Glycine max]
          Length = 563

 Score =  455 bits (1170), Expect = e-125
 Identities = 234/361 (64%), Positives = 285/361 (78%), Gaps = 13/361 (3%)
 Frame = -3

Query: 1046 PSKTHIKSPSLHSIFKTH---HPSYCTKR--NFSVKIVSELKTSQ---NKKTPITKKIIL 891
            P    +K P  H  F+     + S+  KR     + I  +LK SQ   NK   +++KI+L
Sbjct: 17   PQTHFLKVPIFHPFFRFKPFSNSSHGAKRAHTLPLTISCKLKNSQEMKNKGKSVSQKIVL 76

Query: 890  SEGAPS-LSEDVPSK--EENAPKPRKNAGG--PVLRFLKRAPRKFLSILSNLPLAIGEMF 726
            SE +P  L+ED  +    ++ P+  K  GG   V   L+R   K L ILSNLPLAIGEMF
Sbjct: 77   SEASPPPLTEDDKNNGDSKDVPESSKKKGGLSGVANMLRR---KTLQILSNLPLAIGEMF 133

Query: 725  SIAALMALGTAIDQGEVPDYYIQKYAESNPVLGLFTWKWILFFGFDHMFTSPVFLGMLIL 546
            ++A+LMALGT IDQGE PD+Y QKY E +PV G FTW+W+L  GFDHMFTSP+FLG+L L
Sbjct: 134  AVASLMALGTFIDQGEAPDFYFQKYPEDHPVFGFFTWRWVLTLGFDHMFTSPIFLGVLAL 193

Query: 545  LGASLMACTYTTQIPIVKVARRWNFLHSAVAIRKQAYTDSLPRASVRELGVILMGAGYEV 366
            LGASLMACTYTTQ+P++KV+RRW+FLHSA AIRKQ +++SLPRAS++++G ILMGAGYEV
Sbjct: 194  LGASLMACTYTTQLPLIKVSRRWSFLHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEV 253

Query: 365  FLKGPSLYAFKGLAGRFAPIGVHLAMLLIMAGGTLSASGSFRGSVTVPQGLNFVMGDVLG 186
            FLKGPSLYAF+GLAGR AP+GVH+A+LLIMAGGTLSA+GSFRGSVTVPQGLNFV+GDVL 
Sbjct: 254  FLKGPSLYAFQGLAGRLAPVGVHIALLLIMAGGTLSATGSFRGSVTVPQGLNFVVGDVLA 313

Query: 185  PSGFLSRPTEAFNTEVHVNRFYMDYYDSGEISQFHTDLSLYDLDGKEVMRKTISVNDPLR 6
            P GFLS PT+AFNTE+HVN+F MDYY+SGE+SQFHTDLSL ++DGKEVMRKTISVNDPLR
Sbjct: 314  PFGFLSSPTDAFNTEIHVNKFSMDYYESGEVSQFHTDLSLRNMDGKEVMRKTISVNDPLR 373

Query: 5    Y 3
            Y
Sbjct: 374  Y 374


>ref|XP_004137133.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
            [Cucumis sativus]
          Length = 557

 Score =  450 bits (1158), Expect = e-124
 Identities = 234/362 (64%), Positives = 279/362 (77%), Gaps = 12/362 (3%)
 Frame = -3

Query: 1052 LNPSKTH---IKSPSLHSIFKTHHPSYCTKRNFSVKIVSELKTSQNKKTP-ITKKIILSE 885
            LNPS +    +K+  LHS+F +H  +  T +  S  +  + K SQ+KK    + KI+LSE
Sbjct: 9    LNPSLSKPFLLKTSFLHSVF-SHQITLRTAQIRSFSVTCKNKASQDKKLKNASNKIVLSE 67

Query: 884  GAPSLSEDVPSKEENAPKPRKNAGGP-VLRFLKRAPRKFLSILSNLPLAIGEMFSIAALM 708
             AP L+E+   K  NA    K   G   ++ +KR P++ L  LSNLPLAIGEMF+IAALM
Sbjct: 68   AAPPLAEEESDKSGNAEAEVKPGNGSRSMKLVKRLPKRILGALSNLPLAIGEMFTIAALM 127

Query: 707  ALGTAIDQGEVPDYYIQKYAESNPVLGLFTWKWILFFGFDHMFTSPVFLGMLILLGASLM 528
            ALGT IDQGE PD+Y QKY E NP+ G F W+WIL  GFDHM++S +FLGML LLG SLM
Sbjct: 128  ALGTVIDQGEAPDFYFQKYPEDNPLWGFFNWRWILTLGFDHMYSSTIFLGMLALLGISLM 187

Query: 527  ACTYTTQIPIV-------KVARRWNFLHSAVAIRKQAYTDSLPRASVRELGVILMGAGYE 369
            ACTYTTQIP+V        +   WNFL S   IRK   +D LPRASV++LGV+LMGAGYE
Sbjct: 188  ACTYTTQIPLVFFFFLFLSLKHTWNFLQSGETIRKLECSDILPRASVQDLGVVLMGAGYE 247

Query: 368  VFLKGPSLYAFKGLAGRFAPIGVHLAMLLIMAGGTLSASGSFRGSVTVPQGLNFVMGDVL 189
            VF+KGP+LYAFKGLAGRFAPIGVHLAMLLIMAG TLSA+GSFRGSVTVPQGLNFV+GDVL
Sbjct: 248  VFIKGPTLYAFKGLAGRFAPIGVHLAMLLIMAGATLSATGSFRGSVTVPQGLNFVVGDVL 307

Query: 188  GPSGFLSRPTEAFNTEVHVNRFYMDYYDSGEISQFHTDLSLYDLDGKEVMRKTISVNDPL 9
             PSGFL++PTEAFNTEVHVN+FYM+YYDSGEI QF++DLSL+DL+GKEVMRKTISVN+PL
Sbjct: 308  NPSGFLAKPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVMRKTISVNNPL 367

Query: 8    RY 3
            RY
Sbjct: 368  RY 369