BLASTX nr result

ID: Cimicifuga21_contig00024244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024244
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|2...   233   1e-59
gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]      233   1e-59
ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   232   3e-59
ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communi...   231   5e-59
ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicag...   226   1e-57

>ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|222871645|gb|EEF08776.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  233 bits (594), Expect = 1e-59
 Identities = 111/129 (86%), Positives = 119/129 (92%)
 Frame = -2

Query: 389 RIPHALVLETSFDRPNLKYEVTGKTKDSLKQLGQLIRDRFQNMCGIVYCLSKSECVEVST 210
           RIP ALVLETSFDRPNLKYEV GKTK+SLKQLG L+RDRF+N CGIVYCLSK+ECVEVS 
Sbjct: 366 RIPGALVLETSFDRPNLKYEVIGKTKESLKQLGDLLRDRFKNQCGIVYCLSKNECVEVSK 425

Query: 209 YLNEKFKIKTSYYHAGLAARQRVAVQKKWHTGEVHVVCATIAFGMGIDKPDVRFVVHNTL 30
           +LNEK KIK  YYHAGL ARQRV VQ+KWHTGEVH+VCATIAFGMGIDKPDVRFV+HNTL
Sbjct: 426 FLNEKCKIKAVYYHAGLGARQRVDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTL 485

Query: 29  SKSIESYYQ 3
           SKSIESYYQ
Sbjct: 486 SKSIESYYQ 494


>gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 617

 Score =  233 bits (594), Expect = 1e-59
 Identities = 111/129 (86%), Positives = 119/129 (92%)
 Frame = -2

Query: 389 RIPHALVLETSFDRPNLKYEVTGKTKDSLKQLGQLIRDRFQNMCGIVYCLSKSECVEVST 210
           RIP ALVLETSFDRPNLKYEV GKTK+SLKQLG L+RDRF+N CGIVYCLSK+ECVEVS 
Sbjct: 395 RIPGALVLETSFDRPNLKYEVIGKTKESLKQLGDLLRDRFKNQCGIVYCLSKNECVEVSK 454

Query: 209 YLNEKFKIKTSYYHAGLAARQRVAVQKKWHTGEVHVVCATIAFGMGIDKPDVRFVVHNTL 30
           +LNEK KIK  YYHAGL ARQRV VQ+KWHTGEVH+VCATIAFGMGIDKPDVRFV+HNTL
Sbjct: 455 FLNEKCKIKAVYYHAGLGARQRVDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTL 514

Query: 29  SKSIESYYQ 3
           SKSIESYYQ
Sbjct: 515 SKSIESYYQ 523


>ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
           1-like [Glycine max]
          Length = 612

 Score =  232 bits (591), Expect = 3e-59
 Identities = 111/129 (86%), Positives = 119/129 (92%)
 Frame = -2

Query: 389 RIPHALVLETSFDRPNLKYEVTGKTKDSLKQLGQLIRDRFQNMCGIVYCLSKSECVEVST 210
           RIPHALVLE SFDRPNLKYEV  KTK+ LKQLGQL+ DRF+N CGIVYCLSKSECVEVS 
Sbjct: 390 RIPHALVLERSFDRPNLKYEVIAKTKEPLKQLGQLLIDRFRNQCGIVYCLSKSECVEVSK 449

Query: 209 YLNEKFKIKTSYYHAGLAARQRVAVQKKWHTGEVHVVCATIAFGMGIDKPDVRFVVHNTL 30
           +LNEK KIKT YYHAGLAARQRVAVQKKW+ GEVH+VCATIAFGMGIDKPDVRFV+HNT+
Sbjct: 450 FLNEKCKIKTVYYHAGLAARQRVAVQKKWYDGEVHIVCATIAFGMGIDKPDVRFVIHNTM 509

Query: 29  SKSIESYYQ 3
           SKSIESYYQ
Sbjct: 510 SKSIESYYQ 518


>ref|XP_002512491.1| DNA helicase hus2, putative [Ricinus communis]
           gi|223548452|gb|EEF49943.1| DNA helicase hus2, putative
           [Ricinus communis]
          Length = 586

 Score =  231 bits (589), Expect = 5e-59
 Identities = 107/129 (82%), Positives = 120/129 (93%)
 Frame = -2

Query: 389 RIPHALVLETSFDRPNLKYEVTGKTKDSLKQLGQLIRDRFQNMCGIVYCLSKSECVEVST 210
           RIP+ALVLETSFDRPNLKYEV GKTK+SLKQ+GQL++DRF+N CGIVYCLSK+EC+EVS 
Sbjct: 385 RIPNALVLETSFDRPNLKYEVIGKTKESLKQVGQLLKDRFKNQCGIVYCLSKNECIEVSN 444

Query: 209 YLNEKFKIKTSYYHAGLAARQRVAVQKKWHTGEVHVVCATIAFGMGIDKPDVRFVVHNTL 30
           +LN+K KIKT YYHAGLA RQRV VQ+KWH GE H+VCATIAFGMGIDKPDVRFV+HNTL
Sbjct: 445 FLNDKCKIKTVYYHAGLATRQRVEVQRKWHMGEAHIVCATIAFGMGIDKPDVRFVIHNTL 504

Query: 29  SKSIESYYQ 3
           SKSIESYYQ
Sbjct: 505 SKSIESYYQ 513


>ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
           gi|355480249|gb|AES61452.1| Bloom syndrome protein-like
           protein [Medicago truncatula]
          Length = 603

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/129 (82%), Positives = 118/129 (91%)
 Frame = -2

Query: 389 RIPHALVLETSFDRPNLKYEVTGKTKDSLKQLGQLIRDRFQNMCGIVYCLSKSECVEVST 210
           RIPHA+VLE SFDRPNLKYEV  KTK+ LKQLGQL+ DRF++ CGIVYCLSKSECV+VS 
Sbjct: 381 RIPHAIVLERSFDRPNLKYEVIVKTKEPLKQLGQLLMDRFKSQCGIVYCLSKSECVDVSK 440

Query: 209 YLNEKFKIKTSYYHAGLAARQRVAVQKKWHTGEVHVVCATIAFGMGIDKPDVRFVVHNTL 30
           +LNEK KIK +YYHAGLAARQRVAVQKKWH GEVH+VCATIAFGMGIDK DVRFV+HNT+
Sbjct: 441 FLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVCATIAFGMGIDKADVRFVIHNTM 500

Query: 29  SKSIESYYQ 3
           SKSIESYYQ
Sbjct: 501 SKSIESYYQ 509


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