BLASTX nr result

ID: Cimicifuga21_contig00024239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024239
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270417.1| PREDICTED: phenylalanyl-tRNA synthetase, chl...   122   3e-26
ref|XP_002327280.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002528951.1| phenylalanyl-tRNA synthetase, putative [Rici...   113   2e-23
emb|CBI21715.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_003518641.1| PREDICTED: phenylalanyl-tRNA synthetase, chl...   112   3e-23

>ref|XP_002270417.1| PREDICTED: phenylalanyl-tRNA synthetase,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|296090316|emb|CBI40135.3| unnamed protein product
           [Vitis vinifera]
          Length = 427

 Score =  122 bits (306), Expect = 3e-26
 Identities = 65/115 (56%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 SLAVSVTHSTLCA-PSIVYRRYGLRHYSVXXXXXXXXXXXXXXLRKNTIQPVMSVLEIGG 167
           ++A+S+  STL + PSI  RR  L+ +S                +    QPV+SVLE+GG
Sbjct: 2   AVAISLVQSTLFSKPSIFLRRNALKGFSFSIPFSSSSAQKTQSHKWR--QPVVSVLELGG 59

Query: 166 TKICKDDVVKDDPTNNVPDTIFSKLGLQLHNRGQHPIGILKNAVYDYFDKNYSTE 2
            KI KDDVV+DDPTNNVPD IFSKLG+QLH R QHPIGILKNA+YDYFD NYS +
Sbjct: 60  VKIGKDDVVRDDPTNNVPDEIFSKLGMQLHRRDQHPIGILKNAIYDYFDANYSNK 114


>ref|XP_002327280.1| predicted protein [Populus trichocarpa] gi|222835650|gb|EEE74085.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/116 (52%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
 Frame = -3

Query: 340 LAVSVTHSTLCAPS---IVYRRYGLRHYSVXXXXXXXXXXXXXXLRKNTIQPVMSVLEIG 170
           +A+S+ HSTL + +    ++ + G  H+S                 K   +PV+SVLE+G
Sbjct: 1   MALSLVHSTLFSKTSQLFLHTKTGFSHFSSSIPFSSSALPSNP---KTWRRPVISVLELG 57

Query: 169 GTKICKDDVVKDDPTNNVPDTIFSKLGLQLHNRGQHPIGILKNAVYDYFDKNYSTE 2
           G KI +DDVV+DDPTNNVPDTIFSKLGLQLH R QHP+GILKN +YDYFD NYS +
Sbjct: 58  GVKIARDDVVRDDPTNNVPDTIFSKLGLQLHRRDQHPLGILKNTIYDYFDTNYSNK 113


>ref|XP_002528951.1| phenylalanyl-tRNA synthetase, putative [Ricinus communis]
           gi|223531597|gb|EEF33425.1| phenylalanyl-tRNA
           synthetase, putative [Ricinus communis]
          Length = 438

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/66 (75%), Positives = 60/66 (90%)
 Frame = -3

Query: 199 QPVMSVLEIGGTKICKDDVVKDDPTNNVPDTIFSKLGLQLHNRGQHPIGILKNAVYDYFD 20
           +PV+SVLE+GG KI +DDVV+DDPTNNVPDTIFSKLG+QLH R QHPIGILKNA+Y+YFD
Sbjct: 60  RPVVSVLELGGVKIDRDDVVRDDPTNNVPDTIFSKLGMQLHRRNQHPIGILKNAIYEYFD 119

Query: 19  KNYSTE 2
            N+S +
Sbjct: 120 TNFSNK 125


>emb|CBI21715.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/66 (77%), Positives = 58/66 (87%)
 Frame = -3

Query: 199 QPVMSVLEIGGTKICKDDVVKDDPTNNVPDTIFSKLGLQLHNRGQHPIGILKNAVYDYFD 20
           QPV+SVLE+GG KI +DDVV+DDPTNNVPD I SKLG+QLH R QHPIGILKNA+YDYFD
Sbjct: 43  QPVVSVLELGGVKIGRDDVVRDDPTNNVPDAILSKLGMQLHRRDQHPIGILKNAIYDYFD 102

Query: 19  KNYSTE 2
            NYS +
Sbjct: 103 ANYSNK 108


>ref|XP_003518641.1| PREDICTED: phenylalanyl-tRNA synthetase,
           chloroplastic/mitochondrial-like [Glycine max]
          Length = 431

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/117 (49%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
 Frame = -3

Query: 343 SLAVSVTHSTLCA-PSIVYRRYGLRHYS--VXXXXXXXXXXXXXXLRKNTIQPVMSVLEI 173
           ++ +S  H+TL A  S   +  GLR +   +               RK   QPV+SVL++
Sbjct: 2   AMVISSVHATLFARASFFCQSSGLRSFRSCLPFSSSAASVSSHNLSRKKWRQPVLSVLDL 61

Query: 172 GGTKICKDDVVKDDPTNNVPDTIFSKLGLQLHNRGQHPIGILKNAVYDYFDKNYSTE 2
           GG KI ++DVV+DDP NNVPD IFSKLG+QLH R QHP+GILKNA+Y+YFD NYS +
Sbjct: 62  GGVKISREDVVRDDPANNVPDNIFSKLGVQLHRRDQHPLGILKNAIYEYFDTNYSNK 118


Top