BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024238
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|XP_003548486.1| PREDICTED: transcription-repair-coupling fac...   214   4e-54
gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fung...   214   6e-54
ref|XP_003624531.1| Transcription-repair-coupling factor [Medica...   214   6e-54
emb|CBI21248.3| unnamed protein product [Vitis vinifera]              214   6e-54

>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/120 (89%), Positives = 119/120 (99%)
 Frame = +3

Query: 3   SMIKNGDLDIIVGTHALLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSA 182
           +MI++G LDIIVGTH+LLG+RVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSA
Sbjct: 362 NMIEHGHLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSA 421

Query: 183 TPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYSEEKVLSAIKFELDRGGKVFYVL 362
           TPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAY+++K++SAIK+ELDRGG+VFYVL
Sbjct: 422 TPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYNKDKLISAIKYELDRGGQVFYVL 481


>ref|XP_003548486.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 826

 Score =  214 bits (546), Expect = 4e-54
 Identities = 107/118 (90%), Positives = 115/118 (97%)
 Frame = +3

Query: 9   IKNGDLDIIVGTHALLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATP 188
           IKNG LDIIVGTH+LLG RV YNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATP
Sbjct: 373 IKNGSLDIIVGTHSLLGDRVTYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSATP 432

Query: 189 IPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYSEEKVLSAIKFELDRGGKVFYVL 362
           IPRTLYLALTGFRDASL+STPPPERVPIKTHLS++SE+KV+SAIK+ELDRGG+VFYVL
Sbjct: 433 IPRTLYLALTGFRDASLMSTPPPERVPIKTHLSSFSEDKVVSAIKYELDRGGQVFYVL 490


>gb|ABD33152.1| Helicase, C-terminal; Haem peroxidase, plant/fungal/bacterial
           [Medicago truncatula]
          Length = 494

 Score =  214 bits (545), Expect = 6e-54
 Identities = 107/119 (89%), Positives = 117/119 (98%)
 Frame = +3

Query: 6   MIKNGDLDIIVGTHALLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSAT 185
           MIKNGDLDIIVGTH+LLG+RVVYNNLGLLVVDEEQRFGVKQKE+IASFKTSVDVLTLSAT
Sbjct: 202 MIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKERIASFKTSVDVLTLSAT 261

Query: 186 PIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYSEEKVLSAIKFELDRGGKVFYVL 362
           PIPRTLYLALTGFRDASLISTPPPERVPIKT LS++S++KV+SAIK+ELDR G+VFYVL
Sbjct: 262 PIPRTLYLALTGFRDASLISTPPPERVPIKTQLSSFSKDKVISAIKYELDRSGQVFYVL 320


>ref|XP_003624531.1| Transcription-repair-coupling factor [Medicago truncatula]
           gi|355499546|gb|AES80749.1|
           Transcription-repair-coupling factor [Medicago
           truncatula]
          Length = 503

 Score =  214 bits (545), Expect = 6e-54
 Identities = 107/119 (89%), Positives = 117/119 (98%)
 Frame = +3

Query: 6   MIKNGDLDIIVGTHALLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSAT 185
           MIKNGDLDIIVGTH+LLG+RVVYNNLGLLVVDEEQRFGVKQKE+IASFKTSVDVLTLSAT
Sbjct: 186 MIKNGDLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKERIASFKTSVDVLTLSAT 245

Query: 186 PIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYSEEKVLSAIKFELDRGGKVFYVL 362
           PIPRTLYLALTGFRDASLISTPPPERVPIKT LS++S++KV+SAIK+ELDR G+VFYVL
Sbjct: 246 PIPRTLYLALTGFRDASLISTPPPERVPIKTQLSSFSKDKVISAIKYELDRSGQVFYVL 304


>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  214 bits (545), Expect = 6e-54
 Identities = 107/119 (89%), Positives = 117/119 (98%)
 Frame = +3

Query: 6   MIKNGDLDIIVGTHALLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSAT 185
           MIK+GDLDIIVGTH+LLG+RVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSAT
Sbjct: 186 MIKHGDLDIIVGTHSLLGNRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVLTLSAT 245

Query: 186 PIPRTLYLALTGFRDASLISTPPPERVPIKTHLSAYSEEKVLSAIKFELDRGGKVFYVL 362
           PIPRTLYLALTGFRDASLISTPPPERVPI THLSAY++EK++SAIKFEL RGG++FYVL
Sbjct: 246 PIPRTLYLALTGFRDASLISTPPPERVPIITHLSAYNKEKIISAIKFELGRGGQIFYVL 304