BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024230
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   141   4e-33
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   145   6e-33
ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula] g...   131   4e-30
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...   125   2e-29
ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycin...   124   1e-28

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  141 bits (355), Expect(2) = 4e-33
 Identities = 92/249 (36%), Positives = 134/249 (53%)
 Frame = -3

Query: 915 VIFTKLGVVEILLRAQKVCSSWRKLAKSSHIYRSIIVGNPRCYFDCTPLFEEFAKVFIDR 736
           +I  KLG VEIL  AQ VCSSWRK+ +   ++R I +  P  ++D     EE  +  + R
Sbjct: 27  MILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDYNLEELCRQAVKR 86

Query: 735 SCGQMVEFSCDAMVSKNLLSYLVAQSSNSLKLLKIVDWLNTATAALAKNKVAKRIPLLEE 556
           SCGQ++ F+ +   + +LL Y + QS N L  L++V     +   L +     ++PLLE+
Sbjct: 87  SCGQLIHFNIEHFGTDDLLLY-ITQSCNQLSRLRLVYCNRISDEGLVE--AVSKLPLLED 143

Query: 555 LEIRRMYIAKRMIKSVGRSCKKLKSLRLDFVITFNIRDSELDDEAFAIAKYMSRLHRLHL 376
           LE+         ++++G++C  LKSL+L+       R  E D  A AIA+ M  L  LH+
Sbjct: 144 LELSFCSFDVETLETLGQNCPGLKSLKLNRQF---YRRVECDKGALAIAENMPNLRHLHI 200

Query: 375 TDAPLTNNGLQAILDRCQCLEYLLLRNCSNLNLVQGGDLPLARRIKKIRLWNDSNHDYEL 196
               LTN GL+AILD C  LE L LR+C NLNL        + +IK +RL +D   D E 
Sbjct: 201 FGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDLRLPHDPTDDCEF 260

Query: 195 ELRRITDVD 169
               + D D
Sbjct: 261 TTEIVDDDD 269



 Score = 27.7 bits (60), Expect(2) = 4e-33
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 958 GGRRNWLDLPEDVMSHLYQTWG 893
           G  RNWL+LP DV S + Q  G
Sbjct: 12  GESRNWLELPVDVTSMILQKLG 33


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  145 bits (367), Expect(2) = 6e-33
 Identities = 100/256 (39%), Positives = 147/256 (57%), Gaps = 2/256 (0%)
 Frame = -3

Query: 915 VIFTKLGVVEILLRAQKVCSSWRKLAKSSHIYRSIIVGNPRCYFDCTPLFEEFAKVFIDR 736
           +I +KL  VEIL  AQ VCS WRKL +   ++R+I + N     D     EE A+  +DR
Sbjct: 30  MILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGDLCDLGYDLEEMARHAVDR 89

Query: 735 SCGQMVEFSCDAMVSKNLLSYLVAQSSNSLKLLKIVDWLNTATAALAKNKVAKRIPLLEE 556
           S GQ++    D   + NLL+Y++ +SS+ ++ L++V     +   L++    KR+PLL E
Sbjct: 90  SGGQLLSICIDDFATDNLLNYIIDRSSH-IRHLRLVSCYGISDDGLSEG--IKRLPLLVE 146

Query: 555 LEIRRMYIAKRMIKSVGRSCKKLKSLRLDFVITFNIRDSELDDEAFAIAKYMSRLHRLHL 376
           +++     +K +++++G+ C +LKS RL+    F     E D+EA AIA+ M  L  L L
Sbjct: 147 IDLCYCSFSKEVLEAIGQCCPRLKSFRLN-CQGFRHPHIECDEEALAIAQNMPGLKSLQL 205

Query: 375 TDAPLTNNGLQAILDRCQCLEYLLLRNCSNLNLVQGGDLP--LARRIKKIRLWNDSNHDY 202
               LTNNGL AILD C  LE L LR C N+NL  GG+L    A +IK +R  NDS  DY
Sbjct: 206 FGNKLTNNGLLAILDGCCHLESLDLRQCFNVNL--GGNLAKRCAEQIKILRYPNDSTDDY 263

Query: 201 ELELRRITDVDDGATF 154
           E +     ++ D A+F
Sbjct: 264 EFD----AEIHDDASF 275



 Score = 22.3 bits (46), Expect(2) = 6e-33
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 949 RNWLDLPEDVMS 914
           RNW +LP DV S
Sbjct: 18  RNWQELPRDVTS 29


>ref|XP_003593883.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482931|gb|AES64134.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 325

 Score =  131 bits (330), Expect(2) = 4e-30
 Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 11/277 (3%)
 Frame = -3

Query: 912 IFTKLGVVEILLRAQKVCSSWRKLAKSSHIYRSIIV---GNPRCYFDCTPLFEEFAKVFI 742
           IF KL  +++L+RA  VC++WRK++K   ++R+I +   G P    D     E   +  +
Sbjct: 35  IFRKLDAIDLLVRAHNVCTTWRKISKDPFLFRTINMPNLGEPDYQLD----LETLCQRAV 90

Query: 741 DRSCGQMVEFSCDAMVSKNLLSYLVAQSSNSLKLLKIVDWLNTATAALAKNKVAKRIPLL 562
           D SCG +++ + +   + +LL + +A S++ L+ L++    + +   L     A++ P L
Sbjct: 91  DYSCGHIIDINIEYFGTDDLL-HRIANSASHLQRLRLASCWSISDEGLCD--AAEKFPCL 147

Query: 561 EELEIRRMYIAKRMIKSVGRSCKKLKSLRLDFV------ITFNIRDSEL--DDEAFAIAK 406
           EEL+I    ++ R+ + +GR C +LK+L+ +        I ++  D +   D+EAFAIAK
Sbjct: 148 EELDISISNLSDRLFEPIGRRCPRLKTLKFNSQGYRHPHIQYDDDDEDAYDDNEAFAIAK 207

Query: 405 YMSRLHRLHLTDAPLTNNGLQAILDRCQCLEYLLLRNCSNLNLVQGGDLPLARRIKKIRL 226
           YM  L  L L    +TN+GL A+LD C  LE L +R C N+NLV         +IK  RL
Sbjct: 208 YMPGLRHLQLIGNEMTNDGLVALLDGCPHLESLDIRRCFNVNLVGTLGKRCKEQIKYFRL 267

Query: 225 WNDSNHDYELELRRITDVDDGATFHLD*GQVTLVSSY 115
            +D+  DY  +    ++ D G+    D  +  L+S Y
Sbjct: 268 PHDATDDYPFQ---TSECDYGSPVEDDADESDLMSDY 301



 Score = 27.3 bits (59), Expect(2) = 4e-30
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 955 GRRNWLDLPEDVMSHLYQ 902
           G RNWLDLP D +  +++
Sbjct: 20  GERNWLDLPRDAVLSIFR 37


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score =  125 bits (313), Expect(2) = 2e-29
 Identities = 91/253 (35%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
 Frame = -3

Query: 912 IFTKLGVVEILLRAQKVCSSWRKLAKSSHIYRSIIVGNPRCYFDCTPLFEEFAKVFIDRS 733
           IF KLG +EIL RAQ+VCS WR ++K   ++R+I + N     +   +F       ID S
Sbjct: 31  IFQKLGAIEILTRAQRVCSVWRGISKEPLLWRTIDMRNSGD-IETNFVFLAMCHRAIDYS 89

Query: 732 CGQMVEFSCDAMVSKNLLSYLVAQSSNSLKLLKIVDWLNTATAALAKNKVAKRIPLLEEL 553
            G ++  + +   + +LL ++   +SN L+ L++      +   L +  +AK +P LEEL
Sbjct: 90  SGHLLHINIEYFATDDLLRHITHSTSN-LRSLRLACCYQISDEGLCE--IAKELPQLEEL 146

Query: 552 EIRRMYI--AKRMIKSVGRSCKKLKSLRLDFVITFNIRDSELDDEAFAIAKYMSRLHRLH 379
           +I        +  +++VGR C+ LK+L+ +    +     E D+EAFAIA+ M  LH L 
Sbjct: 147 DISISSFNPTRDPLEAVGRCCRHLKTLKFNMK-GYRRPHIECDEEAFAIAETMPTLHHLQ 205

Query: 378 LTDAPLTNNGLQAILDRCQCLEYLLLRNCSNLNLVQGGDLPLARRIKKIRLWNDSNHDYE 199
           L    LTN GL AILD C  LE L LR C N+NL        A +IK++RL  D   D  
Sbjct: 206 LFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCDPTDDCP 265

Query: 198 LELRRITDVDDGA 160
            E     DVD G+
Sbjct: 266 FE----ADVDYGS 274



 Score = 31.6 bits (70), Expect(2) = 2e-29
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 961 CGGRRNWLDLPEDVMSHLYQTWGS 890
           C   RNWLDLP DV+  ++Q  G+
Sbjct: 14  CEEERNWLDLPRDVVCTIFQKLGA 37


>ref|XP_003541669.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 311

 Score =  124 bits (310), Expect(2) = 1e-28
 Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 2/242 (0%)
 Frame = -3

Query: 912 IFTKLGVVEILLRAQKVCSSWRKLAKSSHIYRSIIVGNPRCYFDCTPLFEEFAKVF--ID 739
           IF KLG  EIL RAQ VCS WR ++K   ++R+I + N     D    F   A     ID
Sbjct: 25  IFQKLGATEILTRAQGVCSVWRAISKEPLLWRTIDMRN---LGDIGLDFHLLAMCHRAID 81

Query: 738 RSCGQMVEFSCDAMVSKNLLSYLVAQSSNSLKLLKIVDWLNTATAALAKNKVAKRIPLLE 559
            S G ++  + +   + +LL ++   +SN L+ L++      +   L +  +A+++P LE
Sbjct: 82  YSSGHLLHINVEYFGTDDLLHHITHSTSN-LRSLRLACCYQISDEGLCE--IAEKLPQLE 138

Query: 558 ELEIRRMYIAKRMIKSVGRSCKKLKSLRLDFVITFNIRDSELDDEAFAIAKYMSRLHRLH 379
           EL+I    + K  ++++G+ C  LK+L+ +    +     E D+EAFAIA+ M  LH L 
Sbjct: 139 ELDISISNLTKDPLEAIGQCCPHLKTLKFNME-GYRRPHIECDEEAFAIAETMPGLHHLQ 197

Query: 378 LTDAPLTNNGLQAILDRCQCLEYLLLRNCSNLNLVQGGDLPLARRIKKIRLWNDSNHDYE 199
           L    LTN GL AILD C  LE L LR C N+NL        A +IK++RL  D   DY 
Sbjct: 198 LFGNKLTNEGLLAILDGCPLLESLDLRQCFNVNLAGSLGKRCAEQIKELRLPCDPTDDYP 257

Query: 198 LE 193
            E
Sbjct: 258 FE 259



 Score = 30.0 bits (66), Expect(2) = 1e-28
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 949 RNWLDLPEDVMSHLYQTWGS 890
           RNWLDLP DV+  ++Q  G+
Sbjct: 12  RNWLDLPRDVLCTIFQKLGA 31