BLASTX nr result

ID: Cimicifuga21_contig00024212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024212
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278523.1| PREDICTED: uncharacterized protein LOC100260...   204   2e-50
ref|XP_003559720.1| PREDICTED: uncharacterized protein LOC100828...   176   4e-42
ref|XP_002319306.1| predicted protein [Populus trichocarpa] gi|2...   176   5e-42
ref|NP_001050511.1| Os03g0568600 [Oryza sativa Japonica Group] g...   170   3e-40
emb|CBI26620.3| unnamed protein product [Vitis vinifera]              169   5e-40

>ref|XP_002278523.1| PREDICTED: uncharacterized protein LOC100260565 [Vitis vinifera]
          Length = 421

 Score =  204 bits (519), Expect = 2e-50
 Identities = 122/239 (51%), Positives = 158/239 (66%), Gaps = 7/239 (2%)
 Frame = +2

Query: 38  GKCGSNFDL-LNIETCQNHPLKPNSGKIEWNPTTTGEEEPD---IFATISKCGFTCSLMC 205
           GK  +N D+ L+ +T  +H  K    K++ NP  T   E +   I ATI K G   SL  
Sbjct: 183 GKRRANLDVGLDDKTEVSHENKLL--KLDCNPIETVAREKEDCVITATIGKYGLISSLTH 240

Query: 206 LRTLKQTLENPDFEHLLDSQVGQDAISSGYTVRKLHKKQLDGS--FEK-EDSDEFNIVVP 376
           +   +  L+ P+F+H+L S V  D ++ G+ V+KL K+Q+     FE+ E+ +EF I VP
Sbjct: 241 IWMSQTHLQKPNFDHILASPVALDDLAKGFVVKKLQKRQVTEGQEFEEYEEYEEFEIAVP 300

Query: 377 PGSALLFPTKKSINIEDVDFEVKHLIVLDGTWAKAKRMYHEXXXXXXXXXXXXXXXXMSL 556
           PGS LLFP++KS+ +E++DFEVK+LIVLDGTWAKAKRMY+E                MSL
Sbjct: 301 PGSVLLFPSEKSVAVEEIDFEVKNLIVLDGTWAKAKRMYNENPWLKLLPHLKLEVEKMSL 360

Query: 557 YSEVRQQPKVGCLSTIESIVCAMKALGDDCEELDNLLDVFESMVIDQRRCKDERLSKLS 733
           YSEVR QPK G LSTIESIV ++KA+GD+ E LD LLDVFESMV DQR+CKDERLSK S
Sbjct: 361 YSEVRHQPKAGYLSTIESIVYSLKAVGDNPEGLDGLLDVFESMVGDQRQCKDERLSKAS 419


>ref|XP_003559720.1| PREDICTED: uncharacterized protein LOC100828740 [Brachypodium
           distachyon]
          Length = 470

 Score =  176 bits (447), Expect = 4e-42
 Identities = 93/182 (51%), Positives = 121/182 (66%)
 Frame = +2

Query: 170 ISKCGFTCSLMCLRTLKQTLENPDFEHLLDSQVGQDAISSGYTVRKLHKKQLDGSFEKED 349
           + +C    +   LR   +    P    L    +GQ A+SSG+TV K+ KK+   + E  +
Sbjct: 281 MDRCSIAYTEKELRIDIERSAKPKIRWLSRGPLGQRAVSSGFTVAKIQKKKSKLTGEVSE 340

Query: 350 SDEFNIVVPPGSALLFPTKKSINIEDVDFEVKHLIVLDGTWAKAKRMYHEXXXXXXXXXX 529
            +EF+I +PP SALLFP +++I+I+  D +VKHLIVLDGTWAKA+RMYHE          
Sbjct: 341 FEEFSITIPPHSALLFPCQRAISIDASDCQVKHLIVLDGTWAKAQRMYHENPWLQLLPHV 400

Query: 530 XXXXXXMSLYSEVRQQPKVGCLSTIESIVCAMKALGDDCEELDNLLDVFESMVIDQRRCK 709
                 +SLYSEVR +PK GCLSTIESIV AMK LG+D + LD++LDVFESM+IDQRRCK
Sbjct: 401 KLETDRVSLYSEVRHEPKAGCLSTIESIVVAMKKLGEDEKGLDDVLDVFESMIIDQRRCK 460

Query: 710 DE 715
           DE
Sbjct: 461 DE 462


>ref|XP_002319306.1| predicted protein [Populus trichocarpa] gi|222857682|gb|EEE95229.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  176 bits (446), Expect = 5e-42
 Identities = 98/206 (47%), Positives = 133/206 (64%), Gaps = 6/206 (2%)
 Frame = +2

Query: 134 TTGEEEPDIFATISKCGFTCSLMCLRTLK---QTLENPDFEHLLDSQVGQDAISSGYTVR 304
           T G +EP I  ++ K G   ++          Q      F+ +L S+V  D ++ G+ V+
Sbjct: 121 TKGSKEPVITCSVGKYGIVTNISIGNVWMPHVQWKRRLSFDKILASKVAVDDLAKGFVVK 180

Query: 305 KLHKKQLDGSFEKEDSDEFNIVVPPGSALLFPTKKSINIEDV---DFEVKHLIVLDGTWA 475
           KL ++++DGS E E+ +EF + VPPGS LLFP+K +++++ +   DFE K+LIVLDGTW+
Sbjct: 181 KLQRRRVDGSEELEEVEEFEVAVPPGSVLLFPSKNALDVDGLKAMDFEAKNLIVLDGTWS 240

Query: 476 KAKRMYHEXXXXXXXXXXXXXXXXMSLYSEVRQQPKVGCLSTIESIVCAMKALGDDCEEL 655
           KA+RMY E                +SLYSEVRQQPK G LSTIESIV A++ +GD  E L
Sbjct: 241 KARRMYCENPWLRFLPHLKLDLDRLSLYSEVRQQPKAGYLSTIESIVYALEEIGDYPEGL 300

Query: 656 DNLLDVFESMVIDQRRCKDERLSKLS 733
           DNLL VFESMV DQRR ++ERLSKLS
Sbjct: 301 DNLLGVFESMVGDQRRFRNERLSKLS 326


>ref|NP_001050511.1| Os03g0568600 [Oryza sativa Japonica Group]
           gi|12583795|gb|AAG59647.1|AC084319_5 conserved
           hypothetical protein protein [Oryza sativa Japonica
           Group] gi|108709383|gb|ABF97178.1| DTW domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548982|dbj|BAF12425.1| Os03g0568600 [Oryza sativa
           Japonica Group] gi|125586865|gb|EAZ27529.1| hypothetical
           protein OsJ_11483 [Oryza sativa Japonica Group]
           gi|215717088|dbj|BAG95451.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 500

 Score =  170 bits (431), Expect = 3e-40
 Identities = 96/228 (42%), Positives = 134/228 (58%)
 Frame = +2

Query: 32  HQGKCGSNFDLLNIETCQNHPLKPNSGKIEWNPTTTGEEEPDIFATISKCGFTCSLMCLR 211
           H  +  S F +   + C   P + N G +       G++       + KC  T +   L+
Sbjct: 270 HLVENASEFQMATAQNCNGIP-RENVGTV----AAIGQDWT--VKNMDKCSITYTEKELK 322

Query: 212 TLKQTLENPDFEHLLDSQVGQDAISSGYTVRKLHKKQLDGSFEKEDSDEFNIVVPPGSAL 391
              +    P    L    +GQ A+S+G+TV K+  K+   + E    +EF+I +PP SAL
Sbjct: 323 IEIERGVKPKIRWLSRGPLGQSAVSNGFTVTKIQMKKSKQTGEVSVFEEFSITIPPKSAL 382

Query: 392 LFPTKKSINIEDVDFEVKHLIVLDGTWAKAKRMYHEXXXXXXXXXXXXXXXXMSLYSEVR 571
           LFP +++I+I+  D +++HLIVLDGTWAKA+RMYHE                +SLYSEVR
Sbjct: 383 LFPCQRAISIDASDCQLQHLIVLDGTWAKAQRMYHENPWLQLLPHVKLESDGVSLYSEVR 442

Query: 572 QQPKVGCLSTIESIVCAMKALGDDCEELDNLLDVFESMVIDQRRCKDE 715
            +P+ GCLSTIESIV AM+ LG+D + LD+LLDVFESM+ DQRRCKDE
Sbjct: 443 HEPRAGCLSTIESIVVAMRKLGEDAKGLDDLLDVFESMIADQRRCKDE 490


>emb|CBI26620.3| unnamed protein product [Vitis vinifera]
          Length = 453

 Score =  169 bits (429), Expect = 5e-40
 Identities = 101/221 (45%), Positives = 133/221 (60%), Gaps = 3/221 (1%)
 Frame = +2

Query: 113 KIEWNPTTTGEEEPD---IFATISKCGFTCSLMCLRTLKQTLENPDFEHLLDSQVGQDAI 283
           K++ NP  T   E +   I ATI K G   SL  +   +  L+ P+F+H+L S V  D +
Sbjct: 219 KLDCNPIETVAREKEDCVITATIGKYGLISSLTHIWMSQTHLQKPNFDHILASPVALDDL 278

Query: 284 SSGYTVRKLHKKQLDGSFEKEDSDEFNIVVPPGSALLFPTKKSINIEDVDFEVKHLIVLD 463
           + G+ V+ +                          LLFP++KS+ +E++DFEVK+LIVLD
Sbjct: 279 AKGFVVKNV--------------------------LLFPSEKSVAVEEIDFEVKNLIVLD 312

Query: 464 GTWAKAKRMYHEXXXXXXXXXXXXXXXXMSLYSEVRQQPKVGCLSTIESIVCAMKALGDD 643
           GTWAKAKRMY+E                MSLYSEVR QPK G LSTIESIV ++KA+GD+
Sbjct: 313 GTWAKAKRMYNENPWLKLLPHLKLEVEKMSLYSEVRHQPKAGYLSTIESIVYSLKAVGDN 372

Query: 644 CEELDNLLDVFESMVIDQRRCKDERLSKLS*ILPGNQLELL 766
            E LD LLDVFESMV DQR+CKDERLSK S ++  N++ +L
Sbjct: 373 PEGLDGLLDVFESMVGDQRQCKDERLSKASLLVIYNKVFVL 413


Top