BLASTX nr result

ID: Cimicifuga21_contig00024208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024208
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]    64   1e-08
emb|CAN72400.1| hypothetical protein VITISV_041204 [Vitis vinifera]    64   2e-08
emb|CAN78986.1| hypothetical protein VITISV_015274 [Vitis vinifera]    63   3e-08
emb|CAN60358.1| hypothetical protein VITISV_034722 [Vitis vinifera]    63   3e-08
emb|CAN60145.1| hypothetical protein VITISV_019412 [Vitis vinifera]    61   1e-07

>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
          Length = 1211

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = -1

Query: 226 TTTVKIFDGRNFSYWRNQMEDYLYEKELHLALFGVKKKGNLTDDE*ALLDRKAIGVIWRC 47
           T+ ++ FDG NF+YWR Q+EDYLY ++LHL L G K + ++  +E ALLDR+ +GVI   
Sbjct: 8   TSGIEKFDGTNFAYWRMQIEDYLYGRKLHLPLLGTKPE-SMKAEEWALLDRQVLGVIRLT 66

Query: 46  VTEDVYSHI 20
           ++  V  ++
Sbjct: 67  LSRSVAHNV 75


>emb|CAN72400.1| hypothetical protein VITISV_041204 [Vitis vinifera]
          Length = 1067

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = -1

Query: 226 TTTVKIFDGRNFSYWRNQMEDYLYEKELHLALFGVKKKGNLTDDE*ALLDRKAIGVIWRC 47
           T+ ++ FDG +F+YWR Q+EDYLY ++LHL L G K K ++  +E ALLDR+ +GVI   
Sbjct: 8   TSGIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPK-SMKAEEWALLDRQVLGVIRLT 66

Query: 46  VTEDVYSHI 20
           ++  V  ++
Sbjct: 67  LSRSVAHNV 75


>emb|CAN78986.1| hypothetical protein VITISV_015274 [Vitis vinifera]
          Length = 728

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/69 (44%), Positives = 47/69 (68%)
 Frame = -1

Query: 226 TTTVKIFDGRNFSYWRNQMEDYLYEKELHLALFGVKKKGNLTDDE*ALLDRKAIGVIWRC 47
           T  ++ FDG +F+YWR Q+EDYLY ++LHL L G K + N+  +E ALLDR+ +GVI   
Sbjct: 8   TFGIEKFDGTHFAYWRMQIEDYLYGRKLHLPLLGTKPE-NMKAEEWALLDRQVLGVIRLT 66

Query: 46  VTEDVYSHI 20
           ++  V  ++
Sbjct: 67  LSRSVAHNV 75


>emb|CAN60358.1| hypothetical protein VITISV_034722 [Vitis vinifera]
          Length = 1056

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/69 (44%), Positives = 48/69 (69%)
 Frame = -1

Query: 226 TTTVKIFDGRNFSYWRNQMEDYLYEKELHLALFGVKKKGNLTDDE*ALLDRKAIGVIWRC 47
           T+ ++ FDG +F+YWR Q+EDYLY ++LHL L G K + ++  +E ALLDR+ +GVI   
Sbjct: 8   TSRIEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPE-SMKAEEWALLDRQVLGVIRLT 66

Query: 46  VTEDVYSHI 20
           ++  V  +I
Sbjct: 67  LSRSVAHNI 75


>emb|CAN60145.1| hypothetical protein VITISV_019412 [Vitis vinifera]
          Length = 1227

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/66 (45%), Positives = 46/66 (69%)
 Frame = -1

Query: 217 VKIFDGRNFSYWRNQMEDYLYEKELHLALFGVKKKGNLTDDE*ALLDRKAIGVIWRCVTE 38
           ++ FDG +F+YWR Q+EDYLY ++LHL L G K + ++  +E ALLDR+ +GVI   ++ 
Sbjct: 11  IEKFDGTDFAYWRMQIEDYLYGRKLHLPLLGTKPE-SMKAEEWALLDRQVLGVIRLTLSR 69

Query: 37  DVYSHI 20
            V  +I
Sbjct: 70  SVAHNI 75


Top