BLASTX nr result
ID: Cimicifuga21_contig00024199
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00024199 (858 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK94924.1| unknown [Populus trichocarpa] 186 6e-45 ref|XP_003532894.1| PREDICTED: uncharacterized protein LOC100784... 178 1e-42 ref|XP_003595876.1| Membrane protein, putative [Medicago truncat... 173 4e-41 ref|XP_002265839.2| PREDICTED: uncharacterized protein LOC100263... 171 3e-40 emb|CBI24123.3| unnamed protein product [Vitis vinifera] 171 3e-40 >gb|ABK94924.1| unknown [Populus trichocarpa] Length = 268 Score = 186 bits (472), Expect = 6e-45 Identities = 108/218 (49%), Positives = 135/218 (61%), Gaps = 7/218 (3%) Frame = -2 Query: 635 NKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFRTVIRAGGFPSTHSXXXXXXATSIGLER 456 NKV++AA +SAAIGQLSKP+T L+YG DF+T +AGGFPSTHS AT + LER Sbjct: 58 NKVVIAAVVSAAIGQLSKPYTCVLLYGKDFDFKTTFQAGGFPSTHSSSVVAAATCLALER 117 Query: 455 GFSDSIFGMTVIYAALFMYDAQAVRREVGKHAKVLNKTIVFNPQNS---TKESLVDSNAG 285 GFSDSIFG+ V+YA L MYDAQ VRREVG HAK LNK + NS +++ L+DS Sbjct: 118 GFSDSIFGLAVVYAFLVMYDAQGVRREVGNHAKALNKMLPKTEVNSKVCSRDDLIDSQE- 176 Query: 284 TSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTSENQRSAVPSSIAIDGDPILKETRN 105 + L LL S++ PNS NSPL L +EN+ +A +E Sbjct: 177 ----APEENLGALL--SKEERPFLPNSTNSPLLLETENKTRQTSQRLAFSSLTAAEEATE 230 Query: 104 TFD----PLEESIGHTLVEVIAGALLGFLVTLGVYNVM 3 PL+ESIGHT VEVIAGALLGF V++ VY ++ Sbjct: 231 KIPCSSAPLKESIGHTEVEVIAGALLGFFVSVAVYTIL 268 >ref|XP_003532894.1| PREDICTED: uncharacterized protein LOC100784835 [Glycine max] Length = 267 Score = 178 bits (452), Expect = 1e-42 Identities = 110/218 (50%), Positives = 132/218 (60%), Gaps = 9/218 (4%) Frame = -2 Query: 635 NKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFRTVIRAGGFPSTHSXXXXXXATSIGLER 456 NKVL+AA +S AIGQLSKPFTS +YG D R V++AGGFPS+HS AT GLER Sbjct: 60 NKVLIAAGVSVAIGQLSKPFTSVFLYGKGFDIRAVVQAGGFPSSHSSATVASATLFGLER 119 Query: 455 GFSDSIFGMTVIYAALFMYDAQAVRREVGKHAKVLNKTIVFNPQNS----TKESLVDSNA 288 GFSD IFG+ V+YA L MYDAQ VRREVG HAK LNK ++ NS +++L++S Sbjct: 120 GFSDPIFGLAVVYAGLIMYDAQGVRREVGIHAKTLNKILLQMQANSLHSKDRDNLINSQP 179 Query: 287 GTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTS-----ENQRSAVPSSIAIDGDPI 123 G S K LL S++ S P N L + S + + S +AIDG P Sbjct: 180 GLSKPLKVGLDKSLL--SQEATSLEPQETNRGLLVKSGSKIRQTDADEISSKLAIDGIPQ 237 Query: 122 LKETRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYN 9 LK ESIGHT +EVIAGALLGFLV L VYN Sbjct: 238 LK----------ESIGHTEIEVIAGALLGFLVALAVYN 265 >ref|XP_003595876.1| Membrane protein, putative [Medicago truncatula] gi|355484924|gb|AES66127.1| Membrane protein, putative [Medicago truncatula] Length = 279 Score = 173 bits (439), Expect = 4e-41 Identities = 103/219 (47%), Positives = 133/219 (60%), Gaps = 9/219 (4%) Frame = -2 Query: 635 NKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFRTVIRAGGFPSTHSXXXXXXATSIGLER 456 NKVL+AA +S AIGQLSKPFTS +YG D + +I+AGGFPS+HS AT +GLER Sbjct: 61 NKVLIAAGVSMAIGQLSKPFTSVFLYGKEFDIKALIQAGGFPSSHSSATVACATLLGLER 120 Query: 455 GFSDSIFGMTVIYAALFMYDAQAVRREVGKHAKVLNKTI----VFNPQNSTKESLVDSNA 288 G SD IFG+ V+YA L MYDAQ VRREVG HA+ +NK + V + + K+ L++S Sbjct: 121 GLSDPIFGLAVVYAGLIMYDAQGVRREVGIHARTINKLLLQMHVNHLHSKHKDGLINSQP 180 Query: 287 GTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTSE-----NQRSAVPSSIAIDGDPI 123 G+S K++T L E T S P AN+ + + SE + S D Sbjct: 181 GSSSPPKAETQEKSLLFQE-TTSLEPQQANTNVLVKSESIIRQSDEELQSSDFLEDAKET 239 Query: 122 LKETRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYNV 6 K + PL+ES+GHT VEV+AG LLGFLV L VYN+ Sbjct: 240 SKLVADGLLPLKESVGHTEVEVVAGGLLGFLVGLAVYNL 278 >ref|XP_002265839.2| PREDICTED: uncharacterized protein LOC100263890 [Vitis vinifera] Length = 264 Score = 171 bits (432), Expect = 3e-40 Identities = 107/240 (44%), Positives = 139/240 (57%), Gaps = 6/240 (2%) Frame = -2 Query: 704 KPNASSSFV----CXXXXXXXXXXXAQNKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFR 537 KP+++S FV C A NKVL+AA +SAAIGQLSKPFTSSL+Y D Sbjct: 37 KPSSTSPFVSPTVCLSPGFDQLPEIAHNKVLIAAGISAAIGQLSKPFTSSLLYSRKFDLG 96 Query: 536 TVIRAGGFPSTHSXXXXXXATSIGLERGFSDSIFGMTVIYAALFMYDAQAVRREVGKHAK 357 + I+ GGFPSTHS ATS+ LERGFSDSIFGM V++A+L MYDAQ VRREVG HAK Sbjct: 97 SAIQPGGFPSTHSSAVVAAATSLALERGFSDSIFGMAVVFASLVMYDAQGVRREVGNHAK 156 Query: 356 VLNKTIVFNPQNSTKESLVDSNAGTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTS 177 +N T+ ++ N G + T P S S P N+ L S Sbjct: 157 TINMTL--------SKTRFHCNDGDDM----STTQPGKPSSNIETSPAPKRTNATLLARS 204 Query: 176 ENQRSAVPSSIAIDG-DPILKE-TRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYNVM 3 N+ S++ G D +E ++ +PL+E++GHT VEV+AGALLGF V+L V ++ Sbjct: 205 PNRLRQTSSTLMSSGLDTDAEEGSKKVINPLKETVGHTEVEVLAGALLGFFVSLAVQTML 264 >emb|CBI24123.3| unnamed protein product [Vitis vinifera] Length = 253 Score = 171 bits (432), Expect = 3e-40 Identities = 107/240 (44%), Positives = 139/240 (57%), Gaps = 6/240 (2%) Frame = -2 Query: 704 KPNASSSFV----CXXXXXXXXXXXAQNKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFR 537 KP+++S FV C A NKVL+AA +SAAIGQLSKPFTSSL+Y D Sbjct: 26 KPSSTSPFVSPTVCLSPGFDQLPEIAHNKVLIAAGISAAIGQLSKPFTSSLLYSRKFDLG 85 Query: 536 TVIRAGGFPSTHSXXXXXXATSIGLERGFSDSIFGMTVIYAALFMYDAQAVRREVGKHAK 357 + I+ GGFPSTHS ATS+ LERGFSDSIFGM V++A+L MYDAQ VRREVG HAK Sbjct: 86 SAIQPGGFPSTHSSAVVAAATSLALERGFSDSIFGMAVVFASLVMYDAQGVRREVGNHAK 145 Query: 356 VLNKTIVFNPQNSTKESLVDSNAGTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTS 177 +N T+ ++ N G + T P S S P N+ L S Sbjct: 146 TINMTL--------SKTRFHCNDGDDM----STTQPGKPSSNIETSPAPKRTNATLLARS 193 Query: 176 ENQRSAVPSSIAIDG-DPILKE-TRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYNVM 3 N+ S++ G D +E ++ +PL+E++GHT VEV+AGALLGF V+L V ++ Sbjct: 194 PNRLRQTSSTLMSSGLDTDAEEGSKKVINPLKETVGHTEVEVLAGALLGFFVSLAVQTML 253