BLASTX nr result

ID: Cimicifuga21_contig00024199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00024199
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94924.1| unknown [Populus trichocarpa]                          186   6e-45
ref|XP_003532894.1| PREDICTED: uncharacterized protein LOC100784...   178   1e-42
ref|XP_003595876.1| Membrane protein, putative [Medicago truncat...   173   4e-41
ref|XP_002265839.2| PREDICTED: uncharacterized protein LOC100263...   171   3e-40
emb|CBI24123.3| unnamed protein product [Vitis vinifera]              171   3e-40

>gb|ABK94924.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  186 bits (472), Expect = 6e-45
 Identities = 108/218 (49%), Positives = 135/218 (61%), Gaps = 7/218 (3%)
 Frame = -2

Query: 635 NKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFRTVIRAGGFPSTHSXXXXXXATSIGLER 456
           NKV++AA +SAAIGQLSKP+T  L+YG   DF+T  +AGGFPSTHS      AT + LER
Sbjct: 58  NKVVIAAVVSAAIGQLSKPYTCVLLYGKDFDFKTTFQAGGFPSTHSSSVVAAATCLALER 117

Query: 455 GFSDSIFGMTVIYAALFMYDAQAVRREVGKHAKVLNKTIVFNPQNS---TKESLVDSNAG 285
           GFSDSIFG+ V+YA L MYDAQ VRREVG HAK LNK +     NS   +++ L+DS   
Sbjct: 118 GFSDSIFGLAVVYAFLVMYDAQGVRREVGNHAKALNKMLPKTEVNSKVCSRDDLIDSQE- 176

Query: 284 TSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTSENQRSAVPSSIAIDGDPILKETRN 105
                  + L  LL  S++     PNS NSPL L +EN+       +A       +E   
Sbjct: 177 ----APEENLGALL--SKEERPFLPNSTNSPLLLETENKTRQTSQRLAFSSLTAAEEATE 230

Query: 104 TFD----PLEESIGHTLVEVIAGALLGFLVTLGVYNVM 3
                  PL+ESIGHT VEVIAGALLGF V++ VY ++
Sbjct: 231 KIPCSSAPLKESIGHTEVEVIAGALLGFFVSVAVYTIL 268


>ref|XP_003532894.1| PREDICTED: uncharacterized protein LOC100784835 [Glycine max]
          Length = 267

 Score =  178 bits (452), Expect = 1e-42
 Identities = 110/218 (50%), Positives = 132/218 (60%), Gaps = 9/218 (4%)
 Frame = -2

Query: 635 NKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFRTVIRAGGFPSTHSXXXXXXATSIGLER 456
           NKVL+AA +S AIGQLSKPFTS  +YG   D R V++AGGFPS+HS      AT  GLER
Sbjct: 60  NKVLIAAGVSVAIGQLSKPFTSVFLYGKGFDIRAVVQAGGFPSSHSSATVASATLFGLER 119

Query: 455 GFSDSIFGMTVIYAALFMYDAQAVRREVGKHAKVLNKTIVFNPQNS----TKESLVDSNA 288
           GFSD IFG+ V+YA L MYDAQ VRREVG HAK LNK ++    NS     +++L++S  
Sbjct: 120 GFSDPIFGLAVVYAGLIMYDAQGVRREVGIHAKTLNKILLQMQANSLHSKDRDNLINSQP 179

Query: 287 GTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTS-----ENQRSAVPSSIAIDGDPI 123
           G S   K      LL  S++  S  P   N  L + S     +     + S +AIDG P 
Sbjct: 180 GLSKPLKVGLDKSLL--SQEATSLEPQETNRGLLVKSGSKIRQTDADEISSKLAIDGIPQ 237

Query: 122 LKETRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYN 9
           LK          ESIGHT +EVIAGALLGFLV L VYN
Sbjct: 238 LK----------ESIGHTEIEVIAGALLGFLVALAVYN 265


>ref|XP_003595876.1| Membrane protein, putative [Medicago truncatula]
           gi|355484924|gb|AES66127.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 279

 Score =  173 bits (439), Expect = 4e-41
 Identities = 103/219 (47%), Positives = 133/219 (60%), Gaps = 9/219 (4%)
 Frame = -2

Query: 635 NKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFRTVIRAGGFPSTHSXXXXXXATSIGLER 456
           NKVL+AA +S AIGQLSKPFTS  +YG   D + +I+AGGFPS+HS      AT +GLER
Sbjct: 61  NKVLIAAGVSMAIGQLSKPFTSVFLYGKEFDIKALIQAGGFPSSHSSATVACATLLGLER 120

Query: 455 GFSDSIFGMTVIYAALFMYDAQAVRREVGKHAKVLNKTI----VFNPQNSTKESLVDSNA 288
           G SD IFG+ V+YA L MYDAQ VRREVG HA+ +NK +    V +  +  K+ L++S  
Sbjct: 121 GLSDPIFGLAVVYAGLIMYDAQGVRREVGIHARTINKLLLQMHVNHLHSKHKDGLINSQP 180

Query: 287 GTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTSE-----NQRSAVPSSIAIDGDPI 123
           G+S   K++T    L   E T S  P  AN+ + + SE     +      S    D    
Sbjct: 181 GSSSPPKAETQEKSLLFQE-TTSLEPQQANTNVLVKSESIIRQSDEELQSSDFLEDAKET 239

Query: 122 LKETRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYNV 6
            K   +   PL+ES+GHT VEV+AG LLGFLV L VYN+
Sbjct: 240 SKLVADGLLPLKESVGHTEVEVVAGGLLGFLVGLAVYNL 278


>ref|XP_002265839.2| PREDICTED: uncharacterized protein LOC100263890 [Vitis vinifera]
          Length = 264

 Score =  171 bits (432), Expect = 3e-40
 Identities = 107/240 (44%), Positives = 139/240 (57%), Gaps = 6/240 (2%)
 Frame = -2

Query: 704 KPNASSSFV----CXXXXXXXXXXXAQNKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFR 537
           KP+++S FV    C           A NKVL+AA +SAAIGQLSKPFTSSL+Y    D  
Sbjct: 37  KPSSTSPFVSPTVCLSPGFDQLPEIAHNKVLIAAGISAAIGQLSKPFTSSLLYSRKFDLG 96

Query: 536 TVIRAGGFPSTHSXXXXXXATSIGLERGFSDSIFGMTVIYAALFMYDAQAVRREVGKHAK 357
           + I+ GGFPSTHS      ATS+ LERGFSDSIFGM V++A+L MYDAQ VRREVG HAK
Sbjct: 97  SAIQPGGFPSTHSSAVVAAATSLALERGFSDSIFGMAVVFASLVMYDAQGVRREVGNHAK 156

Query: 356 VLNKTIVFNPQNSTKESLVDSNAGTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTS 177
            +N T+         ++    N G  +     T  P    S    S  P   N+ L   S
Sbjct: 157 TINMTL--------SKTRFHCNDGDDM----STTQPGKPSSNIETSPAPKRTNATLLARS 204

Query: 176 ENQRSAVPSSIAIDG-DPILKE-TRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYNVM 3
            N+     S++   G D   +E ++   +PL+E++GHT VEV+AGALLGF V+L V  ++
Sbjct: 205 PNRLRQTSSTLMSSGLDTDAEEGSKKVINPLKETVGHTEVEVLAGALLGFFVSLAVQTML 264


>emb|CBI24123.3| unnamed protein product [Vitis vinifera]
          Length = 253

 Score =  171 bits (432), Expect = 3e-40
 Identities = 107/240 (44%), Positives = 139/240 (57%), Gaps = 6/240 (2%)
 Frame = -2

Query: 704 KPNASSSFV----CXXXXXXXXXXXAQNKVLVAATLSAAIGQLSKPFTSSLIYGNSVDFR 537
           KP+++S FV    C           A NKVL+AA +SAAIGQLSKPFTSSL+Y    D  
Sbjct: 26  KPSSTSPFVSPTVCLSPGFDQLPEIAHNKVLIAAGISAAIGQLSKPFTSSLLYSRKFDLG 85

Query: 536 TVIRAGGFPSTHSXXXXXXATSIGLERGFSDSIFGMTVIYAALFMYDAQAVRREVGKHAK 357
           + I+ GGFPSTHS      ATS+ LERGFSDSIFGM V++A+L MYDAQ VRREVG HAK
Sbjct: 86  SAIQPGGFPSTHSSAVVAAATSLALERGFSDSIFGMAVVFASLVMYDAQGVRREVGNHAK 145

Query: 356 VLNKTIVFNPQNSTKESLVDSNAGTSILTKSKTLAPLLTISEKTNSHTPNSANSPLDLTS 177
            +N T+         ++    N G  +     T  P    S    S  P   N+ L   S
Sbjct: 146 TINMTL--------SKTRFHCNDGDDM----STTQPGKPSSNIETSPAPKRTNATLLARS 193

Query: 176 ENQRSAVPSSIAIDG-DPILKE-TRNTFDPLEESIGHTLVEVIAGALLGFLVTLGVYNVM 3
            N+     S++   G D   +E ++   +PL+E++GHT VEV+AGALLGF V+L V  ++
Sbjct: 194 PNRLRQTSSTLMSSGLDTDAEEGSKKVINPLKETVGHTEVEVLAGALLGFFVSLAVQTML 253


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