BLASTX nr result
ID: Cimicifuga21_contig00024198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00024198
(642 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom... 70 2e-22
ref|XP_003520272.1| PREDICTED: uncharacterized membrane protein ... 62 1e-19
ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein ... 64 2e-19
ref|XP_003517195.1| PREDICTED: uncharacterized membrane protein ... 62 1e-18
ref|XP_002533809.1| conserved hypothetical protein [Ricinus comm... 63 1e-18
>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
protein product [Vitis vinifera]
Length = 662
Score = 70.1 bits (170), Expect(2) = 2e-22
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +1
Query: 4 LLNYQRKVAVLYELLSGCLANVPEDDKKRSRTRKGYDARHRVA 132
+LNY RKV VLYELLS CL + PED+KK +R RKGYDARHRVA
Sbjct: 207 MLNYPRKVTVLYELLSACLTDTPEDNKKSTRKRKGYDARHRVA 249
Score = 61.6 bits (148), Expect(2) = 2e-22
Identities = 45/142 (31%), Positives = 51/142 (35%)
Frame = +3
Query: 216 ATWLDVKWIKLEAMEVMVAFSAMALMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
ATWLD++W K+EAME+MVA SAMAL K
Sbjct: 254 ATWLDIQWKKVEAMEIMVACSAMALSKEQASKEEETQSPKSQWTKWKRGGIIGAAALTGG 313
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXTLGTLVPVIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 575
TLGT++PVI
Sbjct: 314 TLMAITGGLAAPAIAAGFSALAPTLGTIIPVIGASGFAAAASAAGTVAGSVAIAASFGAA 373
Query: 576 XXXLTGSKMARRIGSVDEFEFK 641
LTGSKMARR GSVDEFEFK
Sbjct: 374 GAGLTGSKMARRTGSVDEFEFK 395
>ref|XP_003520272.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
max]
Length = 680
Score = 62.4 bits (150), Expect(2) = 1e-19
Identities = 45/142 (31%), Positives = 50/142 (35%)
Frame = +3
Query: 216 ATWLDVKWIKLEAMEVMVAFSAMALMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
ATWLDVKW K+EA+E MVA SAMA +K
Sbjct: 272 ATWLDVKWTKMEAIETMVACSAMAFLKGQESKNEETQSKDSKWVKLKRGGIIGAAALTGG 331
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXTLGTLVPVIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 575
TLGTL+PVI
Sbjct: 332 ALLAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAAGAAGTVAGSVAVAASFGAA 391
Query: 576 XXXLTGSKMARRIGSVDEFEFK 641
LTGSKMARR+G VDEFEFK
Sbjct: 392 GAGLTGSKMARRVGGVDEFEFK 413
Score = 59.7 bits (143), Expect(2) = 1e-19
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +1
Query: 1 MLLNYQRKVAVLYELLSGCLANVPEDDKKRSRTRKGYDARHRVA 132
M+L+ QRKV VLYELLSGCL+N+ ED +R RKGYDARHRVA
Sbjct: 227 MMLSDQRKVTVLYELLSGCLSNLGEDIGRR---RKGYDARHRVA 267
>ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
max]
Length = 676
Score = 63.5 bits (153), Expect(2) = 2e-19
Identities = 46/142 (32%), Positives = 51/142 (35%)
Frame = +3
Query: 216 ATWLDVKWIKLEAMEVMVAFSAMALMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
ATWLDVKW K+EA+E MVA SAMAL+K
Sbjct: 270 ATWLDVKWTKMEAIETMVACSAMALIKEKESKNEETQSKESKWAKLKRGGIIGAAALTGG 329
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXTLGTLVPVIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 575
TLGTL+PVI
Sbjct: 330 TLLAITGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAA 389
Query: 576 XXXLTGSKMARRIGSVDEFEFK 641
LTGSKMARR+G VDEFEFK
Sbjct: 390 GAGLTGSKMARRVGGVDEFEFK 411
Score = 57.8 bits (138), Expect(2) = 2e-19
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = +1
Query: 4 LLNYQRKVAVLYELLSGCLANVPEDDKKRSRTRKGYDARHRVA 132
+L+ QRKV VLYELLSGCL+N+ ED +R RKGYDARHRVA
Sbjct: 226 MLSDQRKVTVLYELLSGCLSNLGEDVGRR---RKGYDARHRVA 265
>ref|XP_003517195.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
max]
Length = 667
Score = 61.6 bits (148), Expect(2) = 1e-18
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = +1
Query: 1 MLLNYQRKVAVLYELLSGCLANVPEDDKKRSRTRKGYDARHRV 129
M+L+Y RKV VLYELLS CL+++ E++KK SR RKGYDAR RV
Sbjct: 213 MILSYPRKVTVLYELLSACLSDLGENNKKYSRRRKGYDARQRV 255
Score = 57.4 bits (137), Expect(2) = 1e-18
Identities = 41/142 (28%), Positives = 50/142 (35%)
Frame = +3
Query: 216 ATWLDVKWIKLEAMEVMVAFSAMALMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
ATWLD+KW K+EA+E +VA SAM+ +K
Sbjct: 261 ATWLDIKWAKMEAIETIVASSAMSFIKEQEASKEETQSKEDKWAKWKRGGIIGAAALTGG 320
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXTLGTLVPVIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 575
TLGTL+PVI
Sbjct: 321 TLMAVTGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAA 380
Query: 576 XXXLTGSKMARRIGSVDEFEFK 641
LTGSKMARR+G V+EFEFK
Sbjct: 381 GAGLTGSKMARRVGDVEEFEFK 402
>ref|XP_002533809.1| conserved hypothetical protein [Ricinus communis]
gi|223526263|gb|EEF28578.1| conserved hypothetical
protein [Ricinus communis]
Length = 713
Score = 63.2 bits (152), Expect(2) = 1e-18
Identities = 31/44 (70%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Frame = +1
Query: 4 LLNYQRKVAVLYELLSGCLANVPED-DKKRSRTRKGYDARHRVA 132
+L+Y RK+AVLYE+LSGCLA+ ED +KK +R RKGYDARHRVA
Sbjct: 259 MLSYPRKIAVLYEILSGCLADKREDNNKKYTRRRKGYDARHRVA 302
Score = 55.5 bits (132), Expect(2) = 1e-18
Identities = 40/142 (28%), Positives = 50/142 (35%)
Frame = +3
Query: 216 ATWLDVKWIKLEAMEVMVAFSAMALMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
ATWLD+KWI++EA+E ++A SAMA+ K
Sbjct: 307 ATWLDIKWIQMEAIETIIACSAMAVAKEEESKEEASHSTKSKWAKWKRGGIIGAAAITGG 366
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXTLGTLVPVIXXXXXXXXXXXXXXXXXXXXXXXXXXXX 575
TLGTL+PVI
Sbjct: 367 TLLAITGGLAAPAIAAGFGALAPTLGTLIPVIGASGFAAAASAAGTVAGSVAVAASFGAA 426
Query: 576 XXXLTGSKMARRIGSVDEFEFK 641
L G+KMARR G+VDEFEFK
Sbjct: 427 GAGLAGTKMARRTGNVDEFEFK 448